Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0425 ATGGCGACGCTGATGTCGAGCTCCAGAATTCAACCTTGTATTCTTTCATCTTCCATCAAACACCTTGCCTTTAATTCAACCCTCGCTTCCAATTCCTCTGTTTTTAAACACAATTCATCCTCGTACTTGATCAGGCGCTCTGGACCTCACCGAATTCTCTCTGTTTCCATGTCGGCTACCCCTCTTCAAATCTGTGTCAAAGCTTCCACCACTCTTCCCGACAAGCCCGGCGACTGCCCGTTTTGCCAAAGGGTGTTACTGACATTGGAGGAAAAACATCTATCTTATGACCTGAAGTTGGTAGATTTAGGAAACAAGCCAGAATGGTTCTTAAAAATCAATTCTGAGGGCAAAGTCCCTGTGATTAAATTCGATGAGCAGTGGATCGCAGATTCAGATGTTATTACACAGATATTGGAAGAGAAGTATCCTAATCCGCCTTTAGCGACCCCTCCTGACAAGTCTTCTGTAGGGTCAAAAATCTTCTCTACATTTATTGCTTTTCTCAAGAGCAAGGATCCTAATGATGGAACAGAACAAGCATTGCTTAGCGAGCTAACTTCTTTCAATGATTACATCAAAGAGAATGGTCCTTTTATCAATGGGAAAGAGATTTCTGCTGCAGACTTGTCACTTGGTCCAAAATTGTACCATCTAGAAATTGTATTGGGTCACTACAAGAATTGGTCCGTTCCAGACAGCCTACCCTATGTCAAGTCTTACATGAAGAGCATATTCTCGAAAGAGTCGTTCGTAAAAACACGTGCACTCCCTGAGGATGTTATTGCCGGTTGGCGCCCGAAGGTCTTGGGTTAG 816 43.5 MATLMSSSRIQPCILSSSIKHLAFNSTLASNSSVFKHNSSSYLIRRSGPHRILSVSMSATPLQICVKASTTLPDKPGDCPFCQRVLLTLEEKHLSYDLKLVDLGNKPEWFLKINSEGKVPVIKFDEQWIADSDVITQILEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELTSFNDYIKENGPFINGKEISAADLSLGPKLYHLEIVLGHYKNWSVPDSLPYVKSYMKSIFSKESFVKTRALPEDVIAGWRPKVLG 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2673207 2675878 + evm.model.ptg000007l.425 HCH9g0425 551057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0425 271 FunFam Glutathione S-transferase DHAR3, chloroplastic 149 271 - -
HCH9g0425 271 SFLD Main (cytGST) 78 244 - -
HCH9g0425 271 Gene3D - 149 270 - -
HCH9g0425 271 FunFam Glutathione S-transferase DHAR3 chloroplastic 60 148 - -
HCH9g0425 271 Gene3D Glutaredoxin 60 148 - -
HCH9g0425 271 Pfam Glutathione S-transferase, N-terminal domain 78 147 IPR004045 -
HCH9g0425 271 SFLD Glutathione Transferase (cytosolic) 78 244 IPR040079 -
HCH9g0425 271 CDD GST_N_family 79 140 - -
HCH9g0425 271 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 62 268 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
HCH9g0425 271 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 69 147 IPR004045 -
HCH9g0425 271 CDD GST_C_DHAR 148 268 - -
HCH9g0425 271 SUPERFAMILY GST C-terminal domain-like 142 268 IPR036282 -
HCH9g0425 271 SUPERFAMILY Thioredoxin-like 78 146 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0490 HCH-Chr1:53707843 HCH9g0425 HCH-Chr9:2673207 4.40E-73 dispersed
HCH1g0491 HCH-Chr1:53721209 HCH9g0425 HCH-Chr9:2673207 4.60E-70 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0425 K21888 - csv:101203335 456.832