Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g0504 | ATGGAACTTCAATTTTTTCTTCATACCATCTTTTATTTCACCATTTTATGCAGCACTGTTTTCTCTCTTTTATTTCTCTCTCTCTATTTGATCAATTCAAATCTCTTATGTAACTGCAAAACTTGCCAAACTTATCTCTCATCAAATTGGTCCATGAATTTCACCAATCTATGTGATTGGTATACTCATCTTCTCAAAAACTCTCCCACCAAAACCATTCATATCCATGTTCTTGGAAATATCATTACAGCAAACCCTCAAAATGTGGAATACATGCTCAAAACCAAATTTGAGAATTACCCTAAAGGAAAACCCTTCTCCATCATTCTCAGTGATTTTCTGGGTCGTGGTATTTTCAATGTTGATGGTGATTTGTGGAAGTTTCAGAGGAAAATGGTGAGTTTAGAGGTGAATTTGAACTCGATGAGGGCTCATGTTTTTGAGATTGTCAACTGTGAAATTGAGCATCGGCTTCTTCCGTTGTTGGAATCTGTGGCTGAGAAAGAAGATGGAGTTCTGGATTTGCAAGATGTGTTTCGAAGATTTTCTTTCGACAGTATTTGTCGATTCTCGTTTGGATTGGACCCCATGTGTTTGGAACTCGATCTTCCCATGTCGGAATTCGCTGTCGCCTTCGATTTGGCGTCGAAACTGTCGGCGGAGCGAGCCATGGCGGTTTCGAAGGTGGTCTGGAAGATGAAACGTTGGTTGAATATCGGTTCTGAGAGACAGTTAAAGGAATCCATTGATTTGATTAACATTTTAGCGAGAGAAATGATAAGACAAAAAAGGAAAATGGGATTCTCCAATCACAAAGATCTTCTCTCAAGATTCATGAGAACAGTAAACGATGAAACCTACTTAAGAGACATAGTTATAAGCTTCATTTTAGCCGGTCGCGACACGGTGGCCGCCGCCCTAACCAGCTTTTTCTGGCTGCTGATAAAACACCCTCAAGTTGAGGCAGCAATATACGACGAAGCCAAACAAGTCATGGGCAACAAATCCTCAAGCTTCGAAGAAATGGGAAAACTTCCATATTTACAAGCAGCAATCTACGAGAGTATGAGACTGTTTCCTCCTATACAATTCGACTCCAAGTTTTGCCGCAACGACGACGTTTTGCCGGACGGAACGTTGGTGGAGAAAGGAACTAGGGTTACATACCATCCTTATGCCATGGGTCGGATGGAAGAGATCTGGGGTTCGGATTGTTTGGATTTCAAGCCAGAAAGATGGTTGAAAGAGGGGATTTTCTTTCCTGAGAATCCATTCAAATATCCAGTTTTTCAAGGTGGATTTAGGGTTTGCTTGGGTAAAGACATGGCTTTGATGGAGGTTAAATGCGTTGTTCTTTCATTGATTCGACGGTTTCGTATGAGGTTGGTGAAGCCGTCGTCGGCGTCATCTCAGATGCCGCCACGGTTCTCTCCTGGTCTAACCGCTACCTTCAGGGGCGGACTTAGGGTTTTGGTGCAAGAAAAGGAAACTCCATTCTTATAA | 1503 | 41.98 | MELQFFLHTIFYFTILCSTVFSLLFLSLYLINSNLLCNCKTCQTYLSSNWSMNFTNLCDWYTHLLKNSPTKTIHIHVLGNIITANPQNVEYMLKTKFENYPKGKPFSIILSDFLGRGIFNVDGDLWKFQRKMVSLEVNLNSMRAHVFEIVNCEIEHRLLPLLESVAEKEDGVLDLQDVFRRFSFDSICRFSFGLDPMCLELDLPMSEFAVAFDLASKLSAERAMAVSKVVWKMKRWLNIGSERQLKESIDLINILAREMIRQKRKMGFSNHKDLLSRFMRTVNDETYLRDIVISFILAGRDTVAAALTSFFWLLIKHPQVEAAIYDEAKQVMGNKSSSFEEMGKLPYLQAAIYESMRLFPPIQFDSKFCRNDDVLPDGTLVEKGTRVTYHPYAMGRMEEIWGSDCLDFKPERWLKEGIFFPENPFKYPVFQGGFRVCLGKDMALMEVKCVVLSLIRRFRMRLVKPSSASSQMPPRFSPGLTATFRGGLRVLVQEKETPFL | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3215122 | 3216812 | + | evm.model.ptg000007l.504 | HCH9g0504 | 551136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g0504 | 500 | PRINTS | P450 superfamily signature | 298 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | E-class P450 group I signature | 307 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | E-class P450 group I signature | 287 | 304 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | PANTHER | CYTOCHROME P450 | 38 | 488 | - | - | |
| HCH9g0504 | 500 | SUPERFAMILY | Cytochrome P450 | 51 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | Pfam | Cytochrome P450 | 79 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | Gene3D | Cytochrome P450 | 45 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0504 | 500 | CDD | CYP86A | 75 | 488 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH8g1474 | HCH-Chr8:49132513 | HCH9g0504 | HCH-Chr9:3215122 | 4.70E-119 | dispersed | |
| HCH9g0504 | HCH-Chr9:3215122 | HCH9g1269 | HCH-Chr9:37181708 | 6.30E-110 | dispersed | |
| HCH11g0397 | HCH-Chr11:3913347 | HCH9g0504 | HCH-Chr9:3215122 | 7.50E-199 | wgd | |
| HCH3g1177 | HCH-Chr3:42171642 | HCH9g0504 | HCH-Chr9:3215122 | 7.50E-188 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH9g0504 | K20624 | - | vvi:104880144 | 700.664 |