Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0505 ATGAAGCTGCAAGAGAATCTGTTTCTATTTGTCTTGTTTCTGTATCTGGTGGCCACATTAGTAATCCATGGCTCAGATCACCATGAAAGGAAGCCCTACATTGTGTATATGGGAGACCTACCGGCCACTGCCAGATCTCGATCGGCAGTTGCGGACGACCACCATAACCTTCTTCTGGATGCCATTGGAGATGAAAAAACAGCAAGAGATTCCAAAATACACAGTTATGGAAAGAGCTTCAATGGATTCGTCGCCAGACTCTTGCCACATGAAGCAAACTTGCTCTCAAATCAAGATAGTGTCGTTTCTGTGTTTCCAAGCAGAAAATATAAACTACGGACGACAAGATCTTGGGATTTTCTAGGACTGCATCAAGATTCCAAACGCAACCCTGAAATAGAAAGTAATATCATAGTCGGTGTTTTGGATACAGGGATTTGGATAGATGGTCCAAGTTTTAGAGATGAAGGCTATGGACCACCTCCAGCTAAATGGAAAGGCAAATGTGTCATTGGAGCCAACTTCACTGGCTGCAACAACAAGGTAATAGGAGCAACTTACTTCGATCTCGATCACTCAAATCCCGATCCAGCCAAAAGCGTGGCCGACACGGAGGGCCACGGTTCCCATACTTCCTCCACCGTGGCCGGGTCGCCGGTGAAGGGAGCAAGCTTGTACGGAATAGCAAAAGGAACGGCACGCGGGGGCGTTCCTTCAGCGAGAATCGCAGTATACAAAGTATGTTGGAGTATTTTATGCGACGAAATGGATATACTGGCAGGGTTTGATGAAGCGATAGCCGACGGAGTTGATTTGATTTCGGTGTCGATAGGATCACCGGAGACTGAATTCTTCCAGAACGGACAAGCTATCGGAGCTTTTCATGCAATGAAGAAAGGGATATTGACGTCATGCTCGGCGGGCAACGGCGGTCCTCACTTGTCTACGGTGGAAAATGTGGCGCCGTGGATTATGACCGTCGCCGCAACTGCTATTGATAGAAGATTCGTCACCACTTTCATATTGGGTAACGGCAAGACATTTACTGGATTTTCCATCAATACTTTCTCATCAAGGAAGGAAATGCACCCTCTTACAAGTGGGACTAAGGCGTCTATTATACCCTACCAAGGAAACGCCAGTGCATGTGATTATGACTCTCTAAGTGAAAGCAAGGTGAAGGGAAAGCTTGTGTACTGCCAGAGAACTTACACAGATGTCAACATCAAAGACATTGGTGGGATTGGAGTGATTGAAGTTCTTGATCAAAAAACTGATTATTCCACCATTCTTCTCCTCCCTGGTGCTGCTATCACTCCCACTTTTGGTCATTTTATTGATCATTATATCAACTCCACTAAGAATCCTAGAGCTATCATACAGAAAAGTAAAACTATCAAAATTACTGCTCCTTTTGTAGCTTCTTTCTCCTCCAGAGGACCTCAACTAATCAGCCCCAATATTCTCAAGCCTGATATTGCTGCACCAGGGATAGACATCTTAGCTGCTTATACAAAACTGGCAAGTTTAACTGGTTATATATCAGACACCAGATACACATCATTCAGTGTAATGGCAGGCACATCCATGGCATGTCCTCATGCAACCGCTGCTGCCGCCTACGTCAAGTCGTTCCACCCCGACTGGTCTCCAGCTGCTGTCAAGTCTGCTCTCATGACCACAGCAACTCCAATGATGATCAAATTCAAGGATGCCGAGCTTGGCTCTGGAGCAGGACAAATAAACCCAACTCGGGCAGTGCATCCCGGCCTTGTTTACGACATTTCGATGGATTCCTACATCTCTTTCCTCTGCAAACAAGGCTACAACAGCACAACAATTGGCCTACTTGTTGGTAGCAAGAAGTATAGCTGCTCCGATTTCAAGCCTGCACAAGGCACAGATGGGCTCAACTACCCTACAATGCATAAACAGCTCACTGTGCCTAGTTCAGCTATCAATGCTGTTTTTTACCGGACAGTGACTCATGTCGGTTATGGTAAATCGATGTACAAGGCAAATATAACCTGCCCAAAAGGCCTCTCTGTTAAAGTTTTTCCTAACACTCTAAATTTTGTCAAGTTACACGAAAAGAGAACATTTAAAGTAGTGGTGAAGGGCAATCCTATGCCAGATGGAATAAAGATTCTATCAGCTTTACTTGAGTGGAACGACTCTAAACACATAGTTAGAAGCAATATCCTGATCTATAGGCAATTAACTTGA 2226 44.92 MKLQENLFLFVLFLYLVATLVIHGSDHHERKPYIVYMGDLPATARSRSAVADDHHNLLLDAIGDEKTARDSKIHSYGKSFNGFVARLLPHEANLLSNQDSVVSVFPSRKYKLRTTRSWDFLGLHQDSKRNPEIESNIIVGVLDTGIWIDGPSFRDEGYGPPPAKWKGKCVIGANFTGCNNKVIGATYFDLDHSNPDPAKSVADTEGHGSHTSSTVAGSPVKGASLYGIAKGTARGGVPSARIAVYKVCWSILCDEMDILAGFDEAIADGVDLISVSIGSPETEFFQNGQAIGAFHAMKKGILTSCSAGNGGPHLSTVENVAPWIMTVAATAIDRRFVTTFILGNGKTFTGFSINTFSSRKEMHPLTSGTKASIIPYQGNASACDYDSLSESKVKGKLVYCQRTYTDVNIKDIGGIGVIEVLDQKTDYSTILLLPGAAITPTFGHFIDHYINSTKNPRAIIQKSKTIKITAPFVASFSSRGPQLISPNILKPDIAAPGIDILAAYTKLASLTGYISDTRYTSFSVMAGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMMIKFKDAELGSGAGQINPTRAVHPGLVYDISMDSYISFLCKQGYNSTTIGLLVGSKKYSCSDFKPAQGTDGLNYPTMHKQLTVPSSAINAVFYRTVTHVGYGKSMYKANITCPKGLSVKVFPNTLNFVKLHEKRTFKVVVKGNPMPDGIKILSALLEWNDSKHIVRSNILIYRQLT 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3217585 3221763 + evm.model.ptg000007l.505 HCH9g0505 551137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0505 741 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 139 149 IPR023827 -
HCH9g0505 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
HCH9g0505 741 Pfam Subtilase family 135 565 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH9g0505 741 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
HCH9g0505 741 CDD Peptidases_S8_3 110 563 IPR034197 -
HCH9g0505 741 CDD PA_subtilisin_like 339 460 - -
HCH9g0505 741 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
HCH9g0505 741 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
HCH9g0505 741 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
HCH9g0505 741 Gene3D - 604 739 - -
HCH9g0505 741 Gene3D Peptidase S8/S53 domain 136 600 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH9g0505 741 SUPERFAMILY Subtilisin-like 8 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH9g0505 741 Gene3D - 333 466 - -
HCH9g0505 741 ProSiteProfiles Serine proteases, subtilase domain profile. 117 587 - -
HCH9g0505 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 733 IPR045051 -
HCH9g0505 741 Pfam Fibronectin type-III domain 637 736 IPR041469 -
HCH9g0505 741 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0421 HCH-Chr1:52423896 HCH9g0505 HCH-Chr9:3217585 2.00E-160 dispersed
HCH1g0422 HCH-Chr1:52460628 HCH9g0505 HCH-Chr9:3217585 5.00E-164 dispersed
HCH9g0505 HCH-Chr9:3217585 HCH9g1349 HCH-Chr9:44535517 1.10E-126 dispersed
HCH11g0395 HCH-Chr11:3878362 HCH9g0505 HCH-Chr9:3217585 3.00E-241 wgd
HCH3g1044 HCH-Chr3:14891858 HCH9g0505 HCH-Chr9:3217585 2.10E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0505 - - - 0.0