Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0645 | ATGAATACCAAATTCAGCAAATGGTGTGTCTCAGCAAAGCCATTTTTTGCTGTGGTATTCTTGCAATTTGGGCTTGCAGGAATGGACATTCTGTCTAAAGCTGCTCTCAACCAAGGAATGAGCAACTACGTCCTTGTCGTCTATCGCCACGCCGTTGCCACAGTTGTCATAGCTCCTTTTGCACTCATTTTTGACAAGAAAGTCAGACCAAAAATGACCATTTCAGTCTTTACAAAGCTAGTGGCCCTCAGCTTGCTAGAGCCTGTAATTGATCAGAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCTATGTGCAATATTCTTCCTGCCATTACTTTTGTAATGGCTTGGATTCTAAGGCTTGAAAAGGTGAGAATCAAAAGCATCAGAAGCCAGGCTAAGTTGGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACACTGTTGAAAGGTCCAATAGTGGAGTTATTTTGGATAAAAGAGGGAGCAAATCATCAACAGCAAAGGGGTGATATCAGTCTTCAACATACAATTAAGGGTTCCATAATGATCACAATTGGCTGCTTTAGCTGGGCCTGTTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTATCCAGCGGAGCTTTCTTTGACGGCTTGGATTTGCTTTCTGGGAACCGTGGAGGGAAGTGTATTGGCTTTGGTTATGGAAAGAGGAAATCCTTCAGTCTGGTCCATCACTTGGGGAACTAAATTACTTGCTGCTGTTTACAGTGGGATATTTTGCTCAGGACTGGCTTATTACGTGCAAGGAATAGTGATGAAAGATAGAGGGCCTGTGTTTGTGACAGCCTTCAACCCTTTGAGCATGGTGATTGTGGCCATAATGAGCTCTTTCATTTTGGGTGAACGTCTTTATCTCGGAAGGATACTTGGTGCTGCAGTCATAATAGGAGGGCTGTACCTTGTTGTTTGGGGGAAAGGAAAAGATGGAGATTCGTCAAGTGAAGAGCTAAAGTTGCCTACAAAACAAATAAAAGAGACAGAAGGAAACAGCAATGAAAATTTTAACCATGAACTCATCACAATTGAGGCATCTGACGGTGTAGCAATCACAAAAGATGACCAAATCACTAATAATGCAAATAGAATCATATAA | 1164 | 41.84 | MNTKFSKWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATVVIAPFALIFDKKVRPKMTISVFTKLVALSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKLVGTIATVGGAMIMTLLKGPIVELFWIKEGANHQQQRGDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICFLGTVEGSVLALVMERGNPSVWSITWGTKLLAAVYSGIFCSGLAYYVQGIVMKDRGPVFVTAFNPLSMVIVAIMSSFILGERLYLGRILGAAVIIGGLYLVVWGKGKDGDSSSEELKLPTKQIKETEGNSNENFNHELITIEASDGVAITKDDQITNNANRII | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4288877 | 4291623 | - | evm.model.ptg000007l.645 | HCH9g0645 | 551277 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0645 | 387 | MobiDBLite | consensus disorder prediction | 333 | 353 | - | - | |
HCH9g0645 | 387 | PANTHER | WAT1-RELATED PROTEIN | 17 | 339 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
HCH9g0645 | 387 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 246 | 331 | - | - | |
HCH9g0645 | 387 | Pfam | EamA-like transporter family | 187 | 326 | IPR000620 | GO:0016020(InterPro) | |
HCH9g0645 | 387 | Pfam | EamA-like transporter family | 23 | 135 | IPR000620 | GO:0016020(InterPro) | |
HCH9g0645 | 387 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH13g0119 | HCH-Chr13:752366 | HCH9g0645 | HCH-Chr9:4288877 | 4.60E-97 | dispersed | |
HCH1g0470 | HCH-Chr1:53296202 | HCH9g0645 | HCH-Chr9:4288877 | 1.40E-109 | dispersed | |
HCH1g0471 | HCH-Chr1:53303737 | HCH9g0645 | HCH-Chr9:4288877 | 1.40E-114 | dispersed | |
HCH6g1508 | HCH-Chr6:48637171 | HCH9g0645 | HCH-Chr9:4288877 | 9.00E-69 | dispersed | |
HCH8g0979 | HCH-Chr8:45915588 | HCH9g0645 | HCH-Chr9:4288877 | 1.60E-46 | dispersed | |
HCH9g0645 | HCH-Chr9:4288877 | HCH9g0974 | HCH-Chr9:7272502 | 7.00E-93 | dispersed | |
HCH1g0562 | HCH-Chr1:54561738 | HCH9g0645 | HCH-Chr9:4288877 | 2.00E-25 | wgd | |
HCH1g0468 | HCH-Chr1:53260165 | HCH9g0645 | HCH-Chr9:4288877 | 5.30E-37 | wgd | |
HCH13g0453 | HCH-Chr13:3142416 | HCH9g0645 | HCH-Chr9:4288877 | 4.00E-109 | wgd |
Pathway information
