Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0653 ATGCCTCTTAATATAACTTCCATAAAAACAGCTTCCAATGGCGTATGGCAAGGCGATAATCCTCTACACTTCGCTTTCCCTCTCTTAATAATTCAATCCATTTTAATCCTCGTCGTCACTCGCTTTCTCGCTCTCCTCCTTAAACCCCTCCGCCAACCTAAAGTCATTGCCGAAATTATCGGCGGGGTTCTGCTTGGACCGTCAGCTCTGGGGAGAAACCAAGACTATTTAGACCGTATATTCCCGCCGTGGAGTACACCGATTCTCGAATCCGTTGCGAGTATCGGTTTACTGTTTTTTCTATTTCTCGTCGGTCTCGAGCTTGATTTATCTTCCATCCGCCGGAGCGGAAAACGAGCTTTTGGTATAGCATTAGCAGGAATAACGGTCCCTTTTGTTTCCGGCATCGGAACCGCTTTTCTGTTGAGAAAAACGGTCGACGGAGCTGATAAAGTCGGTTACGGTCAGTTTTTAGTTTTCATGGGCGTTGCTCTTTCAATAACCGCTTTTCCTGTTCTCGCCCGTATATTAGCAGAGCTCAAATTACTCACTACTCAAGTCGGCGAAACGGCCATGGCCGCAGCCGCCTTCAACGACGTCGCTGCCTGGATTCTCCTCGCCCTCGCCATCGCGCTCGCCGGAAGCGGAAGCGACGGCGAGTCGAAGAGTTCGTTGGCTTCTGTTTGGGTGCTTCTTTCCGGCGTTGGGTTTGTTGCTTTCATGATGATAGTGATTCGTCCGGCGATGAAATGGATCTCTCGGCGGTGTTCGTACGATCGTGACGCCGTTGATGAGGTTTATATCGGAGTGACGTTGGCGGGAGTTTTGATATCCGGTTTCGTGACGGATTTGATTGGAATTCATTCGATTTTCGGCGGTTTTGTGTTTGGATTGACGATTCCGAAAGGGGGAGGGTTTGCGGAGAGATTGATAGAGAGGATTGAGGATTTCGTATCGGGATTGCTTCTTCCGCTTTATTTTGCATCAAGTGGTTTGAAAACGGACGTGACGAAGATCCGGGGGCCGAGGGCGTGGGGGCTTCTGGCGTTGGTGATTACGACGGCGTGCGCGGGGAAGATTCTGGCGACGTTTGTGGTGGCGCTGGCATTTATGATGCCGCCGAGAGAGTCGCTGACGCTTGGTGTTCTGATGAATACTAAGGGATTGGTGGAGCTTATTGTTCTTAATATTGGCAAGGAGAAAAAGGTTCTCAATGATGAAGTATTTGCCATATTAGTCTTAATGGCACTCTTCACTACTTTCATCACCACCCCGGTGGTCATGGCCATTTACAAGCCAGCCCGCGGTGTCGCCACCCGAACGCATCGGAAACTCGGTGACCTTTCGGTCGATGACCGCAAAGCCGATGATCTTCGAATCCTCGCTTGCGTCCATGGAGGCGGAAATGTACCTTCATTGATAAACCTTGTTGAGTCAACTAGAAGCACCAAGACTAAGAATTCTTCACTCAAGCTCTTTGTGATGCACCTAGTAGAACTCACTGAGAGATCTTCCTCCATTATTATGGTCCAACGAGCTCGAAAAAACGGCTTCCCGTTCTTTTCAAGATTCAGAAAAGGCGAATGGCGTGACCAAATTGCTGGAGCCTTTCAAGCCTATAGTCAGCTAGGTAAGGTCCGGGTCCGGCTCACGACGGAAATCTCCTCCCTTTCCACGATGCATGAAGATATATGCAACGTGGCAGAAGATAAGAGGGTAGCAATGATCATTTTGCCGTTCCATAAAAACTGGAGGACTGACGGCGGCGGTGGTGGCGAGGAGGCCGTCGAGAATAATATGGGCCATGGTTGGAGAGCCGTGAATCAGAGGGTTCTAAAGAATGCACCTTGCTCGGTGGCGGTTCTTGTGGACCGAGGCTTTGGTGCTAATGGGCCTTATACTCCTGGGCCCAATATCAATGTGGCTCAACAGATTTGTGTCCTCTTTTTTGGTGGGCCCGATGACCGTGAGGCCCTGGAATTGGGCGGACGAATGGTGGAGCACCCGGCGGTGAAAGTGACGGTTGTGAGGTTCCGGCAGAAAGAAGATCAGGCGGGGAGGAATAGTGTTATTCTCCGACCGTTGCCGTCAAAATCCGGCGACAACCACTATAGCTTCTTCACAACAATGAACCATGAAAAAGAAAAGGAGCTAGATGACGCGGCAATGGCAGAATTCAAAAGCAAATGGAATGGAACAGTAGAATACATAGAGAAGGAAGGCAGCAATATTGTCGAAGGGGTGGTGGGTATCGGAAAGGAAGGCGGTTACGATCTAGTTATCGTCGGAAAAGGTCGGTTTCCATCAACAATGGTATTGAAACTAGCGGAGAGGCAAGCGGAGCATGCCGAGTTGGGGCCAATAGGTGACATACTAGCTGGCTCCGGCCGTGGAATATTATCTTCAATTCTCATAATTCAACAGCATGAAGCAGCTCAAGCAGAAGAAACTTCACTTCTAAAGATACCACAATCAGATATTAACAACCACTCATTATCAACTGATGAATCCTCAAGTCATAAAAGGGACATTGTTAAGGATCATGTATAA 2550 48.98 MPLNITSIKTASNGVWQGDNPLHFAFPLLIIQSILILVVTRFLALLLKPLRQPKVIAEIIGGVLLGPSALGRNQDYLDRIFPPWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGKRAFGIALAGITVPFVSGIGTAFLLRKTVDGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAIALAGSGSDGESKSSLASVWVLLSGVGFVAFMMIVIRPAMKWISRRCSYDRDAVDEVYIGVTLAGVLISGFVTDLIGIHSIFGGFVFGLTIPKGGGFAERLIERIEDFVSGLLLPLYFASSGLKTDVTKIRGPRAWGLLALVITTACAGKILATFVVALAFMMPPRESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPVVMAIYKPARGVATRTHRKLGDLSVDDRKADDLRILACVHGGGNVPSLINLVESTRSTKTKNSSLKLFVMHLVELTERSSSIIMVQRARKNGFPFFSRFRKGEWRDQIAGAFQAYSQLGKVRVRLTTEISSLSTMHEDICNVAEDKRVAMIILPFHKNWRTDGGGGGEEAVENNMGHGWRAVNQRVLKNAPCSVAVLVDRGFGANGPYTPGPNINVAQQICVLFFGGPDDREALELGGRMVEHPAVKVTVVRFRQKEDQAGRNSVILRPLPSKSGDNHYSFFTTMNHEKEKELDDAAMAEFKSKWNGTVEYIEKEGSNIVEGVVGIGKEGGYDLVIVGKGRFPSTMVLKLAERQAEHAELGPIGDILAGSGRGILSSILIIQQHEAAQAEETSLLKIPQSDINNHSLSTDESSSHKRDIVKDHV 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4341798 4345322 - evm.model.ptg000007l.653 HCH9g0653 551285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0653 849 MobiDBLite consensus disorder prediction 827 849 - -
HCH9g0653 849 FunFam Cation/H(+) antiporter 15 28 438 - -
HCH9g0653 849 Gene3D - 486 786 - -
HCH9g0653 849 PANTHER CATION/H + ANTIPORTER 9 815 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
HCH9g0653 849 Gene3D - 28 437 IPR038770 -
HCH9g0653 849 MobiDBLite consensus disorder prediction 835 849 - -
HCH9g0653 849 Pfam Sodium/hydrogen exchanger family 39 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g1234 HCH-Chr6:46720635 HCH9g0653 HCH-Chr9:4341798 2.00E-195 dispersed
HCH6g1235 HCH-Chr6:46736001 HCH9g0653 HCH-Chr9:4341798 4.20E-201 dispersed
HCH9g0047 HCH-Chr9:271649 HCH9g0653 HCH-Chr9:4341798 6.80E-93 dispersed
HCH9g0653 HCH-Chr9:4341798 HCH2g0250 HCH-Chr2:38301674 2.50E-183 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0653 K26731 - csv:101207589 1229.54