Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0659 ATGGCCGGAAAGGGAGAAGGTCCGGCTATCGGCATCGATCTCGGAACCACATACTCTTGCGTCGGCGTTTGGCAACATGATCGTGTTGAAATAATCGCCAACGATCAAGGGAACAGAACGACGCCGTCTTACGTTGGTTTTACTGATACCGAGCGTTTGATCGGTGATGCCGCGAAGAATCAGGTTGCCATGAACCCGATTAATACCGTCTTTGATGCAAAGAGGTTGATTGGTCGGAGATTTAGTGATTCATCTGTTCAGAGTGACATTAAGTTGTGGCCATTCAAGGTCATTCCAGGCTCCGGTGACAAGCCCATGATTGTTGTTAGCTACAAGGGTGAAGACAAGCAGTTTGCTGCTGAGGAAATCTCCTCTATGGTTCTAATTAAGATGCGTGAGATTGCTGAAGCGTACCTTGGTTCCACAATTAAGAATGCTGTGGTCACAGTTCCCGCTTACTTTAACGACTCTCAACGTCAAGCTACCAAGGATGCTGGTGTCATTGCCGGTCTCAATGTCATGCGAATCATCAATGAGCCCACTGCTGCTGCCATTGCTTACGGGCTTGACAAGAAGGCCACTAGTGTTGGTGAGAAGAATGTGTTGATTTTTGATCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTTACCATTGAAGAAGGTATTTTTGAGGTGAAGGCCACTGCTGGAGATACCCATCTTGGTGGTGAGGATTTTGATAACAGATTGGTCAACCATTTTGTTCAGGAATTCAAGAGGAAGCATAAGAAGGATATTAGTGGCAACCCCAGAGCTCTGAGAAGGCTGAGGACCTCATGTGAGAGGGCTAAGAGGACTCTCTCATCTACTGCTCAGACTACCATTGAAATTGATTCCTTGTATGAGGGAGTTGATTTTTACTCCACTATTACTCGTGCCAGATTTGAGGAATTGAACATGGATCTTTTTAGGAAGTGTATGGAACCAGTTGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGCACCATCCATGATGTTGTTCTTGTTGGTGGGTCTACTAGGATTCCCAAGGTGCAACAGCTTTTGCAGGACTTCTTCAACGGTAAGGAGCTTTGCAAGAGCATTAACCCCGATGAAGCTGTTGCTTATGGTGCCGCTGTTCAAGCTGCCATCTTGAGTGGTGAGGGCAATGAGAAGGTGCAGGATCTTCTTCTCTTGGATGTCACCCCCCTCTCGCTTGGTTTGGAGACTGCTGGCGGTGTCATGACAGTGTTGATTCCAAGAAATACGACAATCCCAACCAAAAAGGAGCAGGTGTTTTCTACCTACTCAGACAATCAGCCTGGTGTGTTGATCCAGGTGTATGAAGGTGAGAGGACGAGGACCCGTGACAACAACTTGCTTGGTAAGTTTGAGCTCTCAGGAATCCCTCCAGCTCCCAGGGGAGTACCTCAAATCACAGTTTGCTTCGACATAGATGCGAATGGTATCTTGAACGTCTCGGCCGAAGACAAGACCACTGGCCAAAAGAACAAAATCACCATCACTAATGACAAGGGAAGACTATCGAAGGAGGACATTGAAAAGATGGTTCAAGAGGCAGAGAAGTACAAATCTGAAGATGAGGATCACAAGAAGAAGGTCGAAGCCAAGAATGCTTTGGAGAATTACGCTTACAACATGAGGAATACAGTAAATGATGAGAAGATTGGCTCAAAGCTGGCTCCAGCTGACAAGAAGAAGATCGAGGATGCAATCGACCAGGCCATCCAGTGGCTGGATGCCAACCAGCTCGCAGAGTGTGATGAATTCGAGGATAAGATGAAGGAATTGGAGAGCATATGCAACCCAATCATAGCTAAGATGTACCAAGGCGCAGGTGCTGATATGGGTGCCGATGGAATGGATGATAGCGTTCCTGCTGGTGGAAGTGGTGCTGGTCCTAAGATTGAAGAAGTCGACTAA 1947 46.84 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGSGDKPMIVVSYKGEDKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEDHKKKVEAKNALENYAYNMRNTVNDEKIGSKLAPADKKKIEDAIDQAIQWLDANQLAECDEFEDKMKELESICNPIIAKMYQGAGADMGADGMDDSVPAGGSGAGPKIEEVD 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4384754 4387252 + evm.model.ptg000007l.659 HCH9g0659 551291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0659 648 Gene3D - 10 384 - -
HCH9g0659 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
HCH9g0659 648 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
HCH9g0659 648 Gene3D - 192 366 - -
HCH9g0659 648 Gene3D - 545 619 IPR029048 -
HCH9g0659 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
HCH9g0659 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
HCH9g0659 648 FunFam Heat shock 70 kDa 391 545 - -
HCH9g0659 648 CDD HSPA1-2_6-8-like_NBD 9 387 - -
HCH9g0659 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
HCH9g0659 648 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
HCH9g0659 648 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
HCH9g0659 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
HCH9g0659 648 Gene3D - 71 126 - -
HCH9g0659 648 FunFam Heat shock 70 kDa protein 71 126 - -
HCH9g0659 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
HCH9g0659 648 MobiDBLite consensus disorder prediction 625 648 - -
HCH9g0659 648 FunFam Heat shock 70 kDa protein 539 648 - -
HCH9g0659 648 FunFam Heat shock protein 70 10 196 - -
HCH9g0659 648 FunFam Heat shock 70 kDa 235 318 - -
HCH9g0659 648 Gene3D Actin; Chain A, domain 4 235 318 - -
HCH9g0659 648 Coils Coil 521 541 - -
HCH9g0659 648 FunFam Heat shock 70 kDa protein 197 260 - -
HCH9g0659 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
HCH9g0659 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 209 219 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 36 48 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 396 415 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 8 21 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 477 493 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 146 166 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 369 389 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 58 66 - -
HCH9g0659 648 PRINTS 70kDa heat shock protein signature 337 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0204 HCH-Chr11:1916232 HCH9g0659 HCH-Chr9:4384754 0.00E+00 dispersed
HCH13g0464 HCH-Chr13:3227664 HCH9g0659 HCH-Chr9:4384754 0.00E+00 dispersed
HCH7g1200 HCH-Chr7:44902576 HCH9g0659 HCH-Chr9:4384754 1.80E-73 dispersed
HCH8g0108 HCH-Chr8:4325933 HCH9g0659 HCH-Chr9:4384754 7.00E-226 dispersed
HCH8g0950 HCH-Chr8:45700451 HCH9g0659 HCH-Chr9:4384754 0.00E+00 dispersed
HCH12g0925 HCH-Chr12:6282517 HCH9g0659 HCH-Chr9:4384754 5.90E-58 transposed
HCH11g0203 HCH-Chr11:1912135 HCH9g0659 HCH-Chr9:4384754 0.00E+00 wgd
HCH13g0471 HCH-Chr13:3261085 HCH9g0659 HCH-Chr9:4384754 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0659 K03283 - csv:101215599 1221.07