Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0671 ATGACGATCCCTCGGTTTCAAGCTCTTCAATGGTTTAAAAAATGGTCAAAAAAGGAATGGGCAATCGCAGCCATCGGTTTCTCTCTCATCATTTTCATGTTCTCTTTCTTCTCCAACTCTCACCAGAAACTAGATAGCAGCTCCAACTACGCTGTCGATCTCATCACTGCTGATTTCGTTGACCTAACTCTCCTGCACACTACCACTGCAAAAGACGCCCGATGTTTAGATGGAAGTTTGCCTGGATATCATTTTCAGAAAGGTTTTGGATCTGGCTCTAATAATTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCAATACTATTTCATCTTGTTCTTCGCGGAAAAGGACTCCGTTAGGTTCATCGGATTACATGGATCGTCGTGTTCGTTTTTCTGGAATTTTAAGCTCCGATGCTTCGAAAAATCCTGATTTCTTTAATTGGAACAAAGTCAAGATACGTTATTGTGATGGAGCATCGTTTGCTAGCCATCCTGAGAGTGAATTAAAGAATGGAAATAGACTTTATTTCAGAGGCCAGCTCATCTGGGAAGCGCTTATGAATGAACTCTTATCAGCCGGCTTGTCCAAAGCAAGACAGGCTCTCCTTTCAGGGTGTTCAGCTGGAGGGTTGGCTACTCTTGTACATTGTGATGACTTCAGAGAGCTTTTACCGAAGGATGCAACTGTCAAGTGTCTAGCTGATGCTGGATTTTTCCTTGATGAGAAAGATATATCAGGAAATCATACAATGAGATCTTTCTATCATGATGTTTTCTACCTTCAGAATGCAGCAAAAAGTTTACACAAGGATTGTACAGCAACAGAGGAACCGTCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATAAGCACCCCATTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAACATGTCTTGATACCAGATGCATTAGATCTCACTGGCTCTTGGAAGAAGTGTAGACTTAATATTCATAAATGTGATCATAGTCAGCTTAAAATCCTTCAAGGTTTTCGGGACTCTTTGCTGAATGCATTGAAGGACTTCAAACACACCAGTGAAGGAGGATTTTTTGTAAATTCTTGCTTCATTCATTGCCAAACATGGATGTCTGAAACATGGCATTCACCCAATTCTCCAAGAATAAATAACAGGACGATAGCAGAGGCTGTAGGTGATTGGTATTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGTAATCCTACCTGCATTCATATGGATTTTACCTGA 1281 40.75 MTIPRFQALQWFKKWSKKEWAIAAIGFSLIIFMFSFFSNSHQKLDSSSNYAVDLITADFVDLTLLHTTTAKDARCLDGSLPGYHFQKGFGSGSNNWVLHIEGGGWCNTISSCSSRKRTPLGSSDYMDRRVRFSGILSSDASKNPDFFNWNKVKIRYCDGASFASHPESELKNGNRLYFRGQLIWEALMNELLSAGLSKARQALLSGCSAGGLATLVHCDDFRELLPKDATVKCLADAGFFLDEKDISGNHTMRSFYHDVFYLQNAAKSLHKDCTATEEPSKCLFPQEIIKHISTPLFLVNPAYDFWQIQHVLIPDALDLTGSWKKCRLNIHKCDHSQLKILQGFRDSLLNALKDFKHTSEGGFFVNSCFIHCQTWMSETWHSPNSPRINNRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFT 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4448625 4453209 + evm.model.ptg000007l.671 HCH9g0671 551303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0671 426 PANTHER NOTUM-RELATED 58 422 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
HCH9g0671 426 Pfam Pectinacetylesterase 58 406 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g0014 HCH-Chr8:988028 HCH9g0671 HCH-Chr9:4448625 1.60E-125 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0671 K19882 - csv:101206380 721.465