Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0672 ATGGGTAATCGTATTGGAAAAATTGGTCATTGCTTCGCCGGAGACGGCGATATTTCCCGGCGTTATGATCCCGCCGACATTATCACCGACCCCAACGATGGCGGTTTTGGTCATTCCTTTTTCTACCTTCCTCCTGACCCACAAACTATTTTCTCTTCCAAAGATTTCCCAAAAACCTATATCCCTTCTCCGGCACCAACGACAATTTTCCGATCAATTTCCGGCGCTTCTGTTAGTGCCAACGTTTCCACCCCTCTTTCCACTTCTCTCGTCGAGCTTTATCCGTACAGTACGACGTTTGATCGCGCCGCTGCTTTTGATTGCTCCACTTCTTTCGCTTCCGTTCCGCTCCAGCCGGTTCCTCGTCATTCCGTTTCTGGAAATTCCGGCGGGTTTTTATCCGGACCCATTGAACGGAGCTTTGGGTCCGGCCCTATTGATCGTGGGGTTTATTCGGGTCCGATTGAAAGTGGGATTGGAGCAAAACCCAATTCGAAAAAACTAAACTTTATTAAGATTTTGAAGAGAGCGATATCGAAGACTATATTAAGAAATGATAAGATTTCGAATTCTAGAGAAAGGGAATCGGAATCATATAAACATAGAGATAACGGCGAAGACGACGACGACGATTGCTTCATCGGCGGTGAGGGGTTGCAGTGGGCCCAAGGGAAGGCTGGTGAGGATAGAGTTCATGTTGTGATTTCTGAGGAAAATGGTTGGGTTTTTGTTGGAATTTATGATGGTTTTAATGGTCCTGATGCTCCTGATTATTTACTTGCTAATCTCTATACTGCTGTGCTTAAAGAGATTAAAGAGCTTAAGGGTTTGATTTGGAATGATAAGTTTGATTCGACTGCTACTTCGTCATCGATGAATTCTTCGAATTCGGTATCGGTTGAGGAAGATGATGGAACACGGATGAAGAATAGTTTGATGAATGATTGTCAGTCTTCCGGTTGTGTTAAGGAGAATTTTCCGGCCGCGATTGGAGTTTTGAATTTGGAAGCTGATGATTCAGTGAGGAAAAGAAGTTGTAGTACTAATTATAGGATGAATAGTAAGAATTGGAAATATGAATGGGAGAAGGAGAGGGAGAGGGAAAGATTGGAGTTTGATGGGAAGTTAAATAGACAAATTGAACACTCAATATGGGATGAGGAGTCAACAGCTATCAATCATTCTGAGGTTTTGAATGCTTTATCTCAAGCATTGAGGAAGACGGAGGAAGCGTATCTTGAGAATGCCGATAAGATGGTTACGAGAAATCCAGAGTTAGCTCTCATGGGTTCTTGTGTTTTGGTTATGTTAATGAGAGGAGAGGATGTTTACTTGATGAATGTTGGAGACAGCCGAGCGATTGTTGCTCAGCAGCTCGAACCAGATTTCGGAATCTTGAAGCCATATAGAGACTTCGAGAGAATCAATGAGGGAACTTTGAGAGTATACGAATCATCTAATGGAGTTGAATTTGACAGATTAACAAGCTTGGCTTCCCATCAGCTTACAATGGATCACAGCACCTATGTAGAGGAGGAAGCTCAGAGGATAAAGAAAGCTCATCCGGACGATGCTTCCGCGATTATGAACGATAGGGTGAAAGGTTATTTGAAAATCACCCGTGCTTTTGGAGCTGGCTTTCTCAAACAGCCGAAATGGAACGATGCACTGCTAGAGATGTTCAGAATTGATTATGTGGGAAGTTCGCCGTACATCACCTGCGATCCGTCACTGTGCCATTACAAACTCAGTCCAACAGATAGATTCTTGATATTGTCCTCTGATGGACTCTATCAGTACTTCACCAATGAAGAAGCTGTTGCTCAAGTTGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCCGCGCAACATCTCGTTGAAGAAGTATTGTTCAGAGCAGCTAAGAAAGCTGGTATGGACTTCCATGAGTTGCTTGATATCCCGCAAGGGGAGAGGCGGAAGTATCACGATGACGTCTCGGTGATCATCATTTCTTTCGAAGGAAGAATTTGGCATTCGTTGATGTAA 2031 43.62 MGNRIGKIGHCFAGDGDISRRYDPADIITDPNDGGFGHSFFYLPPDPQTIFSSKDFPKTYIPSPAPTTIFRSISGASVSANVSTPLSTSLVELYPYSTTFDRAAAFDCSTSFASVPLQPVPRHSVSGNSGGFLSGPIERSFGSGPIDRGVYSGPIESGIGAKPNSKKLNFIKILKRAISKTILRNDKISNSRERESESYKHRDNGEDDDDDCFIGGEGLQWAQGKAGEDRVHVVISEENGWVFVGIYDGFNGPDAPDYLLANLYTAVLKEIKELKGLIWNDKFDSTATSSSMNSSNSVSVEEDDGTRMKNSLMNDCQSSGCVKENFPAAIGVLNLEADDSVRKRSCSTNYRMNSKNWKYEWEKERERERLEFDGKLNRQIEHSIWDEESTAINHSEVLNALSQALRKTEEAYLENADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQLEPDFGILKPYRDFERINEGTLRVYESSNGVEFDRLTSLASHQLTMDHSTYVEEEAQRIKKAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGSSPYITCDPSLCHYKLSPTDRFLILSSDGLYQYFTNEEAVAQVESFIASFPEGDPAQHLVEEVLFRAAKKAGMDFHELLDIPQGERRKYHDDVSVIIISFEGRIWHSLM 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4456440 4458865 - evm.model.ptg000007l.672 HCH9g0672 551304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0672 676 ProSiteProfiles PPM-type phosphatase domain profile. 213 667 IPR001932 -
HCH9g0672 676 PANTHER PROTEIN PHOSPHATASE 2C 218 667 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
HCH9g0672 676 SMART PP2C_4 212 665 IPR001932 -
HCH9g0672 676 MobiDBLite consensus disorder prediction 189 208 - -
HCH9g0672 676 FunFam Protein phosphatase 2C 29 332 674 - -
HCH9g0672 676 CDD PP2Cc 387 667 IPR001932 -
HCH9g0672 676 SUPERFAMILY PP2C-like 225 668 IPR036457 -
HCH9g0672 676 Pfam Protein phosphatase 2C 370 617 IPR001932 -
HCH9g0672 676 Gene3D - 177 672 IPR036457 -
HCH9g0672 676 MobiDBLite consensus disorder prediction 189 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g1098 HCH-Chr6:45624089 HCH9g0672 HCH-Chr9:4456440 9.50E-121 dispersed
HCH9g0672 HCH-Chr9:4456440 HCH11g1331 HCH-Chr11:45244950 8.70E-06 dispersed
HCH7g1094 HCH-Chr7:43516206 HCH9g0672 HCH-Chr9:4456440 1.30E-62 transposed
HCH2g1087 HCH-Chr2:53786056 HCH9g0672 HCH-Chr9:4456440 2.50E-184 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0672 - - - 0.0