Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0690 | ATGGCCACAATCTTCAACTTCACGTTAATTATTTTCATATCAATTGCTGTATTTTTTGCAGCTTCTCAAGATAACATCTTCACCTTCCATGGCTTCCGATCTTTCGATCTCATCCTTCACGGTATCGCCCAAGTAACCTCTAATGGCCTCTTGAAGCTTACTAATGAAATCGAGCAACAAACGGGTCATGCCTTCTATCCAAATCCCATTACCTTCAAAAACTTGTCTAATAATAATTCCTCGATTCTCTCTTTCTCTACAACTTTCGTCTTCGCCATAGTTTCCGAGTATCCAGACCTCGGTGGCCACGGAATTGCTTTCGTTGTTTCTCCGACGAGAGGTATTATGGGAGCTCGGCCGAGTGAGAGCCTCGGCCTTTTTAATGAATCAAACAATGGAAATGACACGAATCATATTTTCGCGGTTGAGCTCGACACGATCCAGAACAAGAATCTTAGAGACATCAATGATAACCATGTTGGAATTAATATCAATGGACTGCAATCCTTGGTAGCTGCACCTGCTGGTTATTATGACGATACGAAAGGCGAATTTCGAAACTTGACGCTGATAAGCGGCCAACCGATGCAACTTTGGGTCGAATATGATGGTTTCATGAAGGAGATAAAGGTCACTATGGCTTCCATGGAAATTGATAAACCTAAAACCCCACTTCTATCGTTGAACCGTGATTTGTCATCGGTTATCAACGACATCATGTACGTCGGTTTCTCATCATCGACGGGCTCTATGTCGACATCGCATTATGTTCTTGGTTGGAGCTTTAGAATTAATGGAGAAGCTCAAAAACTTGCTCTCTCTCAACTACCTAAACTTCCTCCAAGAAGAAAAGAGAGATCTCTAATTTTGACTATTGGGGTTCCTTTGATTTGTGTCTTCTTGGTTTTGGTGATAGCTGTAGTAATTTATTTCATTTGGAGGAAGAGGAAATTTGCTGAAATTTTAGAGGATTGGGAGCTTGAATATGGACCTCAAAGGCTCAAATACAAAGATCTATATATTGCTACTAAAGGATTTAGAGAAAGAGAATTTCTGGGGTTTGGTGGATTTGGTAGGGTTTATAAAGGAGTTTTACCAAATTCAAAAATTGACATAGCTGTGAAGAAGATTTCTCATGAATCAAGACAAGGGATGAAGGAGTTTGTAGCCGAGGTAGTGAGTATCGGTAGGCTTCGTCACCGGAATCTCGTGCCGTTGTTGGGCTATTGCCGGCGAAAAGGAGAGCTGTTATTGGTGTATGATTATATGCCAAATGGGAGCTTGGATAAGTATCTGTTCGACCAACCGGAAACCACACTAGATTGGGGACAGAGATTTAGGATCATCAAAGGAGTGGCCTTGGGGCTGTTTTATCTTCACGAAGAGTGGGATCAAGTTGTGATTCATAGAGATGTAAAGGCAAGTAATGTTTTACTCGATGCCGAATTCAATGGAAGATTGGGTGATTTTGGGTTAGCAAAATTATATGATCATGGGGCCGATCCTCGTACGACCCACGTTGTCGGAACTCTCGGGTATCTTGCACCAGAACAAACTCGAACAGGAAAATCTACAACAAAAACAGATGTATATGCATTCGGAGCATTTCTACTGGAAGTAGCTTGTGGGAGAAGACCCATTGACCCACAAGAAGAAGCAGAGGATTTCATATTAGTGGAATGGGTATTCTCTTGCTGGGCAAACGGCAACATTCTCACAGCAACCGATCCAAATTTAGGAAGAAACTACGAGGCAGAAGAAGTGGAGTTGGTGCTAAATCTTGGCTTGCTATGCTCCCATTCGTCGCCCGTGGCACGACCAAGCATGCTGCAGATCGTGCGGTTTTTGGAAGGCGACGTGCAGCTTCCAAGGCTGCAATCAATGGATTTGAGCGTTTCTTCTTTAAGTGGGTTAATGCTTTGGCATAGAGGCAATGGCGATGGCGATGAGAATACAATGTCTTATCCCATTTCCATGGAAAGGATTGTGTCCGTTTCGAGTTCTTCTTCTCTTGCTGGATCTGTTTTGTCGGAAGGTCGCTGA | 2043 | 42.83 | MATIFNFTLIIFISIAVFFAASQDNIFTFHGFRSFDLILHGIAQVTSNGLLKLTNEIEQQTGHAFYPNPITFKNLSNNNSSILSFSTTFVFAIVSEYPDLGGHGIAFVVSPTRGIMGARPSESLGLFNESNNGNDTNHIFAVELDTIQNKNLRDINDNHVGININGLQSLVAAPAGYYDDTKGEFRNLTLISGQPMQLWVEYDGFMKEIKVTMASMEIDKPKTPLLSLNRDLSSVINDIMYVGFSSSTGSMSTSHYVLGWSFRINGEAQKLALSQLPKLPPRRKERSLILTIGVPLICVFLVLVIAVVIYFIWRKRKFAEILEDWELEYGPQRLKYKDLYIATKGFREREFLGFGGFGRVYKGVLPNSKIDIAVKKISHESRQGMKEFVAEVVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLFDQPETTLDWGQRFRIIKGVALGLFYLHEEWDQVVIHRDVKASNVLLDAEFNGRLGDFGLAKLYDHGADPRTTHVVGTLGYLAPEQTRTGKSTTKTDVYAFGAFLLEVACGRRPIDPQEEAEDFILVEWVFSCWANGNILTATDPNLGRNYEAEEVELVLNLGLLCSHSSPVARPSMLQIVRFLEGDVQLPRLQSMDLSVSSLSGLMLWHRGNGDGDENTMSYPISMERIVSVSSSSSLAGSVLSEGR | 680 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4598386 | 4601007 | - | evm.model.ptg000007l.690 | HCH9g0690 | 551322 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0690 | 680 | SUPERFAMILY | Protein kinase-like (PK-like) | 328 | 637 | IPR011009 | - | |
HCH9g0690 | 680 | FunFam | L-type lectin-domain containing receptor kinase S.4 | 423 | 629 | - | - | |
HCH9g0690 | 680 | FunFam | Lectin-domain containing receptor kinase A4.3 | 331 | 422 | - | - | |
HCH9g0690 | 680 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 422 | - | - | |
HCH9g0690 | 680 | FunFam | L-type lectin-domain containing receptor kinase V.9 | 24 | 269 | - | - | |
HCH9g0690 | 680 | Pfam | Protein kinase domain | 348 | 556 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH9g0690 | 680 | ProSiteProfiles | Protein kinase domain profile. | 346 | 625 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH9g0690 | 680 | CDD | STKc_IRAK | 352 | 618 | - | - | |
HCH9g0690 | 680 | CDD | lectin_legume_LecRK_Arcelin_ConA | 27 | 266 | IPR001220 | GO:0030246(InterPro) | |
HCH9g0690 | 680 | SMART | serkin_6 | 346 | 616 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH9g0690 | 680 | Pfam | Legume lectin domain | 27 | 277 | IPR001220 | GO:0030246(InterPro) | |
HCH9g0690 | 680 | Gene3D | - | 25 | 276 | - | - | |
HCH9g0690 | 680 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 27 | 283 | IPR013320 | - | |
HCH9g0690 | 680 | PANTHER | - | 28 | 631 | IPR050528 | GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER) | |
HCH9g0690 | 680 | Gene3D | Transferase(Phosphotransferase) domain 1 | 423 | 634 | - | - | |
HCH9g0690 | 680 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH9g0690 | 680 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 376 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0062 | HCH-Chr11:992771 | HCH9g0690 | HCH-Chr9:4598386 | 1.20E-156 | dispersed | |
HCH11g0172 | HCH-Chr11:1737807 | HCH9g0690 | HCH-Chr9:4598386 | 9.60E-255 | dispersed | |
HCH7g0145 | HCH-Chr7:989427 | HCH9g0690 | HCH-Chr9:4598386 | 8.00E-124 | dispersed | |
HCH9g0690 | HCH-Chr9:4598386 | HCH9g0694 | HCH-Chr9:4620381 | 1.70E-179 | dispersed | |
HCH9g0745 | HCH-Chr9:4992984 | HCH9g0690 | HCH-Chr9:4598386 | 1.70E-16 | dispersed | |
HCH9g0690 | HCH-Chr9:4598386 | HCH9g0691 | HCH-Chr9:4607767 | 1.20E-286 | tandem | |
HCH6g1419 | HCH-Chr6:48001460 | HCH9g0690 | HCH-Chr9:4598386 | 4.40E-68 | transposed | |
HCH8g1421 | HCH-Chr8:48843406 | HCH9g0690 | HCH-Chr9:4598386 | 1.90E-138 | transposed | |
HCH7g0372 | HCH-Chr7:2680043 | HCH9g0690 | HCH-Chr9:4598386 | 7.50E-98 | transposed | |
HCH11g0171 | HCH-Chr11:1731887 | HCH9g0690 | HCH-Chr9:4598386 | 1.40E-194 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81761 | PF00069 | Pkinase | 1.10E-43 | CL0016 | HCH | PK |
Pathway information
