Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0691 ATGTCCATCATCATCTTTACGTTAATTTCCATCTTAACTTTTGTTATTTTTGTAGCTTCTCAAGATGTTCACTTCACTTTCAATGGGTTCCAATCTTCTAATCTCAGCCTTGATGGCGCGGCCCAAGTAACCCCTAATGGCTTGTTGCAGCTTACCAATGAGATAACCGACAGCCAAATGGGCCATGCCTTTTACCCTAATCCCATTACCTTTAGAAACCATTCTATTAATTCTTCCACTTTCTCTTTCTCTACAACTTTCGTCTTCGCCTCTGTTTCAGAATTTCGAGACCTCGGAGGACATGGGATGGCTTTCGTTCTATCTCCGACGAGAGGTATCCCCGGGGCTCGGCCGAGTGAGAGCCTTGGCCTTTTTAACGAAACTAATAATGGAAATGAAACCAATCATATTTTTGCAGTTGAATTCGACACGATATGGAACCAGAACCTTAATGATATCAATGATAACCATGTTGGAATTGATATTAATGGACTGAAATCCGAGAGAGCTGAGTGGGCTGGATATTATCAGGACATGAATGGCGAGTTTCGAAACTTGTCGCTGATAAGTGGCCAACCGATGCAAGTTTGGGTTGAATATGACGGTTTCATGAAGCGGATCAACGTCACTATGGCTCCCATGGAGATTGAAAAACCTAAAACTCCACTTTTGAGTTTGAACCGTGATTTGTCGTCGGTCATCAACGACATCATGTACGTCGGTTTCTCGTCAGCGACGGGTGCTATTTCAACATCTCATTATGTTCTTGGTTGGAGCTTTAGGACCAATGGTGAAGCAAAAAAACTCGATCTCTCTCAACTACCAGAACTTCCTCCAAGAGGGGAAGAGAGGTCTTTATTTTTGATAGTAGGGTTACCTTTGATTTGTGTTTTCTCAGTTTTGGTAGTGGTTTGTGGTGTAATATATTTCATTTGGAGGAAGAGGAAATTTGCACAAGTCTTGGAGGATTGGGAGCTTGAATATGGACCTCAAAGATTCGAATACAAAGATCTATATATTGCCACTAAAGGATTTAGAGAGAAAGAACTTTTAGGTTTAGGCGGATTTGGCCGAGTGTATAAAGGGGTTTTACCAAATTCAAAAGGTGAGGTTGCTGTGAAGCAGATTTCTCATGAATCCAAACAAGGGATGAAGGAGTTTGTAGCCGAGATAGTGAGTATCGGTCGCCTTCGTCATCGGAATCTCGTGCCGTTGTTGGGCTACTGCCGGCGAAAAGGAGAGCTGTTATTGGTGTATGAATGTATGCCAAATGGGAGCTTGGATAAGTATCTATTTGACGAACCGGAAACCACAATAGACTGGGGCGACAGATTTAGGATCATCAAAGGGGTGGCATCAGGGCTGTTTTATCTTCATGAAGAGTGGGAACAAGTCGTTATTCATAGAGATGTTAAGGCCAGTAATGTGATGCTTGATGCTGAATTCAATGGAAGATTGGGTGATTTTGGGTTAGCTAAATTACACAACCATGGAACCGATCCTCAAACCACCAATGTCGTAGCCGGAACTTTCGGGTATCTAGCACCAGAGCAAATGAGAACCGGGAAAGCAACAACAAAAACGGACGTATATGCATTCGGAGCATTTCTTCTTGAAGTTGCATGTGGAAGAAGACCAGTAAACTTTCAAGAAGCAAAGGAATTCATATTAGTAGAATGGGTTTTTTCTTGTTGGACAAATGGAAACATTCTCCAAACAGCAGATCCAAATCTGGGCATAAATTACGAACCCGAAGAACTCGACTTGGTCTTGAAACTTGGCTTGGTATGCTGCCACTCATCGCCACTGGTTCGCCCGAGCATGCGCCAGATTGTGCAGTATTTGGAAGGTGATATGCCGTTGCCCGAGCTAACAGCGCCCGGTTTTAGGCCTTCGGCAGCCTACGCTTACGGTAGCGGCGACGGCGACGGCAATAGCAATAGCGTTGGCTTGAATATTGATGATTTTGGTATGTCTTTTCCCTTTCTAGTGGAGACGACATCGACAAGTTCTTCTCAGGTTACGGAGTCTGTTCTATCAAAAGGCCGCTGA 2052 43.62 MSIIIFTLISILTFVIFVASQDVHFTFNGFQSSNLSLDGAAQVTPNGLLQLTNEITDSQMGHAFYPNPITFRNHSINSSTFSFSTTFVFASVSEFRDLGGHGMAFVLSPTRGIPGARPSESLGLFNETNNGNETNHIFAVEFDTIWNQNLNDINDNHVGIDINGLKSERAEWAGYYQDMNGEFRNLSLISGQPMQVWVEYDGFMKRINVTMAPMEIEKPKTPLLSLNRDLSSVINDIMYVGFSSATGAISTSHYVLGWSFRTNGEAKKLDLSQLPELPPRGEERSLFLIVGLPLICVFSVLVVVCGVIYFIWRKRKFAQVLEDWELEYGPQRFEYKDLYIATKGFREKELLGLGGFGRVYKGVLPNSKGEVAVKQISHESKQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYECMPNGSLDKYLFDEPETTIDWGDRFRIIKGVASGLFYLHEEWEQVVIHRDVKASNVMLDAEFNGRLGDFGLAKLHNHGTDPQTTNVVAGTFGYLAPEQMRTGKATTKTDVYAFGAFLLEVACGRRPVNFQEAKEFILVEWVFSCWTNGNILQTADPNLGINYEPEELDLVLKLGLVCCHSSPLVRPSMRQIVQYLEGDMPLPELTAPGFRPSAAYAYGSGDGDGNSNSVGLNIDDFGMSFPFLVETTSTSSSQVTESVLSKGR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4607767 4610024 - evm.model.ptg000007l.691 HCH9g0691 551323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0691 683 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0691 683 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
HCH9g0691 683 SMART serkin_6 345 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0691 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 280 IPR013320 -
HCH9g0691 683 FunFam Lectin-domain containing receptor kinase A4.3 330 421 - -
HCH9g0691 683 PANTHER - 25 637 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
HCH9g0691 683 Pfam Legume lectin domain 23 275 IPR001220 GO:0030246(InterPro)
HCH9g0691 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0691 683 SUPERFAMILY Protein kinase-like (PK-like) 321 616 IPR011009 -
HCH9g0691 683 Gene3D Transferase(Phosphotransferase) domain 1 422 628 - -
HCH9g0691 683 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0691 683 CDD STKc_IRAK 351 617 - -
HCH9g0691 683 FunFam L-type lectin-domain containing receptor kinase S.4 422 627 - -
HCH9g0691 683 FunFam L-type lectin-domain containing receptor kinase V.9 22 267 - -
HCH9g0691 683 CDD lectin_legume_LecRK_Arcelin_ConA 23 264 IPR001220 GO:0030246(InterPro)
HCH9g0691 683 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524(InterPro)
HCH9g0691 683 Gene3D - 21 274 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH3g0652 HCH-Chr3:4550617 HCH9g0691 HCH-Chr9:4607767 8.00E-140 dispersed
HCH7g0808 HCH-Chr7:15528433 HCH9g0691 HCH-Chr9:4607767 3.10E-99 dispersed
HCH8g1421 HCH-Chr8:48843406 HCH9g0691 HCH-Chr9:4607767 4.60E-137 dispersed
HCH9g0691 HCH-Chr9:4607767 HCH9g0694 HCH-Chr9:4620381 1.60E-172 dispersed
HCH9g0690 HCH-Chr9:4598386 HCH9g0691 HCH-Chr9:4607767 1.20E-286 tandem
HCH13g0647 HCH-Chr13:5064122 HCH9g0691 HCH-Chr9:4607767 4.40E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81762 PF00069 Pkinase 7.60E-45 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0691 - - - 0.0