Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0728 | ATGGAAGAAAAGTTGCAGGTTTTTGGTACTTTTGGAAGTCCGTTTAGCTGCAGAGTAGAATTGGCTCTGAAACTGAAAGGCATAGAATATGAATACATTCAAGAAAATTTACATGTGAAGAAGAGTGATTTGCTTCTCAAATACAATCCCATTCATAAGAAGGTTCCAGTTCTCATCCATGGCGGAAAACCCCTTGCAGAGTCTTTCATCATCCTTGAATATATTGAAGAGAATTGGAAATCAGACTTCCCCATCTTTCCTGAAGATCCCCATGAAAGAGCTGTTGCCAGGTTCTGGGCTAAGTTTGTCGATGACAAGTTTGTGCCTGCGCTATTGAGAGCTGTAAAAAGTGGAGGAGAAGAGAGAAAGAAGGCTGAAGAAGAAGGGAGGAAGGTGTTGGAGGCACTCGAGAATGAGCTTAAAAATAAGAAATTCTTCGGGGGAGAGAGGATTGGATTCGTGGACATTGCTGCTATCTTAATAGCTTATTGGGTTCCTGTGATTGAAGAAGGTTTTGGTTTAGAGATAATGAACGCTGAGAATTTTCCAAAGCTGAGGAAATGGAGTGAGGAGTTGGTGAGCCAAACTGTGGTGAAGGAGACTCTGCCTCCTAAAGATGAGCTTAGTGCTTATTTGCGACGCGTTTGGGAAAAATACGTTTAG | 663 | 41.93 | MEEKLQVFGTFGSPFSCRVELALKLKGIEYEYIQENLHVKKSDLLLKYNPIHKKVPVLIHGGKPLAESFIILEYIEENWKSDFPIFPEDPHERAVARFWAKFVDDKFVPALLRAVKSGGEERKKAEEEGRKVLEALENELKNKKFFGGERIGFVDIAAILIAYWVPVIEEGFGLEIMNAENFPKLRKWSEELVSQTVVKETLPPKDELSAYLRRVWEKYV | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4849760 | 4851024 | + | evm.model.ptg000007l.728 | HCH9g0728 | 551360 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0728 | 220 | SFLD | Glutathione Transferase (cytosolic) | 2 | 217 | IPR040079 | - | |
HCH9g0728 | 220 | FunFam | Tau class glutathione S-transferase | 86 | 220 | - | - | |
HCH9g0728 | 220 | Pfam | Glutathione S-transferase, C-terminal domain | 99 | 195 | IPR004046 | - | |
HCH9g0728 | 220 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
HCH9g0728 | 220 | SUPERFAMILY | Thioredoxin-like | 4 | 108 | IPR036249 | - | |
HCH9g0728 | 220 | Gene3D | - | 86 | 219 | - | - | |
HCH9g0728 | 220 | CDD | GST_N_Tau | 5 | 79 | - | - | |
HCH9g0728 | 220 | FunFam | Tau class glutathione S-transferase | 1 | 88 | - | - | |
HCH9g0728 | 220 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 77 | IPR004045 | - | |
HCH9g0728 | 220 | SUPERFAMILY | GST C-terminal domain-like | 77 | 219 | IPR036282 | - | |
HCH9g0728 | 220 | Coils | Coil | 122 | 142 | - | - | |
HCH9g0728 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 213 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
HCH9g0728 | 220 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
HCH9g0728 | 220 | CDD | GST_C_Tau | 90 | 213 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
HCH9g0728 | 220 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 83 | IPR004045 | - | |
HCH9g0728 | 220 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 212 | IPR010987 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH9g0726 | HCH-Chr9:4844178 | HCH9g0728 | HCH-Chr9:4849760 | 1.80E-106 | dispersed | |
HCH9g0727 | HCH-Chr9:4846833 | HCH9g0728 | HCH-Chr9:4849760 | 3.20E-98 | tandem | |
HCH9g0728 | HCH-Chr9:4849760 | HCH9g0729 | HCH-Chr9:4853678 | 2.00E-84 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH9g0728 | K00799 | - | csv:101213782 | 266.159 |