Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0750 ATGATTGTGTCCATGGACTTAAATGCCTCCCCGGTGCCCGAAGAGGATGAAGAGTTGTATGAGAGGCATAATGAGGTGTATAGTGCTCCAGAGGAACATATAGAGACTGGTGCCAGTATAGCACGTCGGGAGCGAGAAGAAAGAAAAAGGCGTTTGAAAAGAGACCGCTCTATTGAGAGACCAGTGCATGAATATCAACCACCTGCACGGGATCAGTTTTATCCTGCAAAGAACATAAAATCTGATAGAAACAGGCTTCCCCCAGGTTGGTTGGATTGCCCTGCATATGGTCAAGAAATATGTTGCATGATTCCTTCCAAGGTTCCTCTCGGTGAATCCTTTAACGATTGTATAACACCTGGTAAAAGATACTCATTTAAGCAAGTCATCCACCAGCAAAGAGTTTTGGGAAGAAAACTCGGTTTGGTGATTGACTTGTCAAATTCTTACCGTTATTATACAACTTCAGATTTGAATAAAGAGGGTATCAAGTATGTTAAGATTCCTTGCAAGGGGAGGGATTCTGTACCTGACAACAAGTCAGTCAATATGTTCGTTCATGAGGTCATTCAATTCCTTTCCCGCCAAAAACAACATGCAAAGAAGTATATTCTTGTCCATTGCACACATGGCCATAATCGCACTGGATATATGATCATACATTTTCTCGTACGCGCTCACTCGTTTTCTGTTACTCAGGCAGTAAAAACGTTTTCTGATGCACGCCATCCTGGTATCTATAAGCCAGACTACATCGATGCCTTGTATGCCTTTTATCACGAAAAAAAGCCTGATATGGTTGTTTGCCCACCCACACCTGAGTGGAAGAGATCTTCTGATCTTGATCTTAATGGCGAAGCAGTTCCGGATGATGATGATGATGGGGGTTCTACCGCTCCTCTGCATGAGAATAATGATAATGCTCTAGTGATGACAAATGATGATATCTTGGGAGATGAGATACCCGATGACCAGGAGCGTGCTATGAAACAATTCTGCTACCAAATGCTTAAAATGAATGCTGGGGCAAGAGCAAATTTGCAATTCCCTGGGTCACATCCGGTATCTCTTAACAGAGACAATTTACAACTGCTGAGGCAACGCTATTATTATGCCACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTACAGATGGATGTTACTTAATTGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGGTTTCCTTACAGGAATGCTAATGATGGCTTACTTGAGAAGACCCATCACTACACGTTACTTGATGGAGAAATGATAATTGATACTGTGCCAGACTCGAAAAAGCAGGAGAGAAGATATCTTATATATGATATGATGGCAGTTAATCATGTCTCAGTCACTGAGCGTCCTTTCTATGAAAGGTGGAAAATGCTCGAGAAAGAAGTGATTGAACCTCGTAATTATGAGCGGCATAATATTTACCAAAGTAGAAATCCTCATTACAGATATGACCTGGAGCCATTCAGGGTGAGGAGGAAAGATTTTTGGCTGCTCTCTACAGTTACCAAGCTTTTGAAGGAGTTCATACCAAGGCTTTCACATGATGCCGATGGTCTAATATTCCAGGGTTGGGATGATGCTTATGTTCCTCGAACCCATGAGGGTCTTTTGAAGTGGAAATATCCTGAAATGAACTCAGTTGACTTCCTCTTTGAGTTGGGTGAAGATGATTCTCAGACTCTGCTTCTGTTCGAGCGAGGAAAGAGGAAAACAATGGATGGAAATAGGGTTAAGTTCAAAGATGATCCGGATCCCTCATTTTATTCGGGAAAGATTATAGAGTGTTCTTGGGATTCTGACGAGCAAGTGTGGGTCTGCATGCGTATCAGGACGGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGCAGCATTAGAGACAATATCACAGAGGAGGATTTGTTGAAGGAGATTTATGAGATCATTCGCTTGCCCATGTATGCGGATAGGATACGGAATGATAGTAAAGCAGCCCAACATACAAATTCAACACGTCGAAGGACGCCAATTGCTATTCTATTGAATTATAGACGGATCATCATCGTCTTCGGGTTTTGGCAATTTCCTCTTTCTGGCTCTGCTTTTCAACTTGCAGAGTCTTTCAAGGTGATTTCAGTTCTTTTCATTTGCTTTATTCTATTTACTCGTTTGAAATGCAATCAAGGTGAGGAGGCCAAGAAAAACAAATTTCGGGAACGAGAAGCTACGGACGATGCCCTTGGATACCCCGAAATAGATGAGGATGCTTTGTTGAACACACAATGTCCAAGGAAGTTGGAGCTAAGATGGCAAACAGAAGTGAGTTCTAGTATATATGCCACCCCCTTGGTCGCTGATATTAACAGTGATGGAAAACTTGAAGTAGTCGTTCCATCGTTTGTTCACTACCTTGAAGTTCTAGAAGGTTCTGATGGGGATAAAATGCCAGGTTGGCCTGCTTTTCACCAGTCAACTGTGCATGCCAGTCCTCTTCTATACGATATCGACAAAGATGGTGTGAGGGAAATAGCCTTGGCAACATACAACGGCGAAGTGCTCTTTTTCAGGATATCAGGATATATGATGACAGATAAGTTAGTGATACCACGTCTCCGGGTCCGTAAGAATTGGTATGTGGATTTGAATCCAGATCCAGTGGACCGGTCTCATCCAGATGTTCATGATGACCAGCTTGTCATGGAAGCCACTAAAACAAGATCAATGTCTCAACACAATGGGAGTAGTCCAGAGTTAAACCATACAATTGAGCAGACAATGAATGGAAGTACAACTGAGCTAAATTCTTCGGCTACCATATCAACACAAGTGTTAAATGTCTCAGATATAAATAACAGTAAAGTGAATGAGAACAAAACTGAACCAGAAATTGTCCTACCTACAAGTGTGGTCAATACTTCTATAAATCATACAACAGGAGTAGATGATGTGAAGAATGGGACCAGCACAGGTAGACGACTTCTAGAAGATAATAGTTCTAAACAATCTCAAGAGGATGGTTCTGGGTCCAAGGTCAATGATAGTGGAGATATTCATGTTGCCACTGTGGAAAACGATGAAGCTTTGGAAGCAGATGCTGATTCCTCATTTGAGCTATTCCGTGAAAATGATGAGCTGGCTGATGAGTATAATTATGACTATGACGATTATGTTGATGAATCTATGTGGGGGGATGAGGAATGGACTGAACAGAAGCATGAAAAGGTGGAGGAGTATGTGAATATTGATGCACATATCTTATGCACACCTGTTATAGCTGACATTGACAATGATGGAGTATCTGAAATGATTGTAGCTGTTTCATACTTTTATGATCATGAGTACTACGACAACCCAGAGCACAAGAAAGAACTGGGTGATCTTGATATCGGGAAATATGTTGCTGGTGCCATTGTTGTATTCGATCTAGATTCAAAGCAAGTGAAATGGACAACTCAGCTGGATTTGAGTACAGATTCGGCAAATTTTCGTGCTTATATATATTCCTCCCCTACTGTTATTGATTTGGATGGTGATGGGAATTTGGATATTCTTGTTGGAACTTCCTTTGGCTTGTTCTATATCTTGGATCATCATGGAAAGGTGAGAGAAAAATTTCCTCTTGAAATGGCTGAAATTCAAGGAGCTGTAGTTGCAGCTGATATCAACGATGATGGGAAAATTGAACTTGTAACTACTGATACACATGGAAACGTTGCTGCTTGGACTGCTCAAGGTCAAGAAATTTGGGAAACGAATCTTAAGAGTCTTGTACCACAGGGTCCATCCATTGGTGATGTTGATGGAGATGGTTATACTGATGTTGTGGTACCAACAATATCAGGAAATATATATGTTCTTAGTGGCAAGGATGGGTCATTTGTTCGTCCTTACCCCTATAGAACTCATGGAAGAGTGATGAATCCAGTTCTTCTTGTTGATTTGAGCACACGTGATGATAAAAAGAAGGGACTTACTCTAGTCACATCATCATTTGATGGGTATTTGTATGTTATAGACGGACCTACATCATGTGCTGATGTTATTGACATTGGCGAGACCTCATACAGCATGGTCTTGGCTGACAATGTTGACGGTGGAGATGATCTTGATCTTATTGTTACAACCATGAACGGAAATGTTTTCTGCTTTTCAACTCCTTCTCCCCATCACCCTCTCAAGGCATGGAAATCAACTAATCAAGGAAGAAATAATGTTGCAATCCGGCATAACCGTGAAGGTATTTATGTTTCACATTCATCTAGAGCTTTCCGTGATGAGGAAGGCAAGAACTTCTGGGTGGAGATAGAGATTGTAGACGGTTACAGATACCCGTCTGGGAATCAAGCACCATATAATGTCACTATGACCTTGTTAGTTCCTGGAAATTACCAGGGCGAGAGAAAAATCAAACAAAACCAGATCTTCCAAGAACCAGGTAAACACCGGGTAAAACTTCCGACTGTCAGCGTTAGGACTACAGGCACTGTTTTGGTGGAAATGGTTGATAAGAATGGACTCTATTTTTCGGACGAATTCTCCCTCACATTCCATATGCATTACTATAAACTCTTGAAATGGCTTCTCGTCCTCCCAATGCTTGGAATGTTTGGCGTGCTCATCATCCTTCGGCCACAAGAAGCCATGCCATTGCCATCATTTTCACGGAATACTAACCTATGA 4704 41.35 MIVSMDLNASPVPEEDEELYERHNEVYSAPEEHIETGASIARREREERKRRLKRDRSIERPVHEYQPPARDQFYPAKNIKSDRNRLPPGWLDCPAYGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVLGRKLGLVIDLSNSYRYYTTSDLNKEGIKYVKIPCKGRDSVPDNKSVNMFVHEVIQFLSRQKQHAKKYILVHCTHGHNRTGYMIIHFLVRAHSFSVTQAVKTFSDARHPGIYKPDYIDALYAFYHEKKPDMVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSTAPLHENNDNALVMTNDDILGDEIPDDQERAMKQFCYQMLKMNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITTDGCYLIDRGFKFRRVQMRFPYRNANDGLLEKTHHYTLLDGEMIIDTVPDSKKQERRYLIYDMMAVNHVSVTERPFYERWKMLEKEVIEPRNYERHNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFELGEDDSQTLLLFERGKRKTMDGNRVKFKDDPDPSFYSGKIIECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIYEIIRLPMYADRIRNDSKAAQHTNSTRRRTPIAILLNYRRIIIVFGFWQFPLSGSAFQLAESFKVISVLFICFILFTRLKCNQGEEAKKNKFREREATDDALGYPEIDEDALLNTQCPRKLELRWQTEVSSSIYATPLVADINSDGKLEVVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHASPLLYDIDKDGVREIALATYNGEVLFFRISGYMMTDKLVIPRLRVRKNWYVDLNPDPVDRSHPDVHDDQLVMEATKTRSMSQHNGSSPELNHTIEQTMNGSTTELNSSATISTQVLNVSDINNSKVNENKTEPEIVLPTSVVNTSINHTTGVDDVKNGTSTGRRLLEDNSSKQSQEDGSGSKVNDSGDIHVATVENDEALEADADSSFELFRENDELADEYNYDYDDYVDESMWGDEEWTEQKHEKVEEYVNIDAHILCTPVIADIDNDGVSEMIVAVSYFYDHEYYDNPEHKKELGDLDIGKYVAGAIVVFDLDSKQVKWTTQLDLSTDSANFRAYIYSSPTVIDLDGDGNLDILVGTSFGLFYILDHHGKVREKFPLEMAEIQGAVVAADINDDGKIELVTTDTHGNVAAWTAQGQEIWETNLKSLVPQGPSIGDVDGDGYTDVVVPTISGNIYVLSGKDGSFVRPYPYRTHGRVMNPVLLVDLSTRDDKKKGLTLVTSSFDGYLYVIDGPTSCADVIDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAWKSTNQGRNNVAIRHNREGIYVSHSSRAFRDEEGKNFWVEIEIVDGYRYPSGNQAPYNVTMTLLVPGNYQGERKIKQNQIFQEPGKHRVKLPTVSVRTTGTVLVEMVDKNGLYFSDEFSLTFHMHYYKLLKWLLVLPMLGMFGVLIILRPQEAMPLPSFSRNTNL 1567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5016647 5040083 + evm.model.ptg000007l.750 HCH9g0750 551382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0750 1567 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 552 - -
HCH9g0750 1567 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 253 IPR000387 GO:0016311(InterPro)
HCH9g0750 1567 FunFam mRNA capping enzyme, putative 312 549 - -
HCH9g0750 1567 MobiDBLite consensus disorder prediction 279 305 - -
HCH9g0750 1567 PANTHER - 736 1556 IPR045232 -
HCH9g0750 1567 MobiDBLite consensus disorder prediction 1 62 - -
HCH9g0750 1567 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
HCH9g0750 1567 Gene3D DNA ligase/mRNA capping enzyme 312 549 - -
HCH9g0750 1567 CDD RNA_5'-triphosphatase 89 256 - -
HCH9g0750 1567 FunFam mRNA capping enzyme family protein 82 297 - -
HCH9g0750 1567 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311(InterPro)
HCH9g0750 1567 Pfam FG-GAP-like repeat 1228 1284 IPR013517 -
HCH9g0750 1567 SUPERFAMILY Nucleic acid-binding proteins 554 667 IPR012340 -
HCH9g0750 1567 Gene3D - 550 659 IPR012340 -
HCH9g0750 1567 Gene3D - 1002 1398 IPR015943 GO:0005515(InterPro)
HCH9g0750 1567 Pfam mRNA capping enzyme, C-terminal domain 555 650 IPR013846 -
HCH9g0750 1567 SUPERFAMILY Integrin alpha N-terminal domain 778 1321 IPR028994 -
HCH9g0750 1567 CDD Adenylation_mRNA_capping 346 552 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
HCH9g0750 1567 Pfam Dual specificity phosphatase, catalytic domain 138 259 IPR000340 GO:0016311(InterPro)
HCH9g0750 1567 MobiDBLite consensus disorder prediction 984 1018 - -
HCH9g0750 1567 MobiDBLite consensus disorder prediction 984 1023 - -
HCH9g0750 1567 Gene3D Protein tyrosine phosphatase superfamily 82 295 IPR029021 -
HCH9g0750 1567 MobiDBLite consensus disorder prediction 15 62 - -
HCH9g0750 1567 FunFam mRNA capping enzyme family protein 550 659 - -
HCH9g0750 1567 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 276 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0750 - - - 0.0