Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g0840 | ATGACTTCTGGTCAGCCCTTGTTGGCTTCACCAGAATCTGTATCAGTTGTTCAGTATCGCTCCCCGTCTCGAAATTTTAGCTCTGTTGGTTGTCTCTGCCGCAGTGCTTCCTTCACTTCTTCCAGTTTTGATGATGTTCAGAGCGATGTTGATGATGTGAAGGAAAATAGCACTAGCTCTGTTGGAGATAATAGCTGGAGTGAGACTTGTCTTATACATTCCGCTTCTCTTCCTAAGAAAAAGCAGTTTTATTCTGTTGGCTCGCGGTTTCCTCAGAAGTCTCCATTTGACTACCCCACGCAGGATAGAAGACGCCTGGTCTCGTGGGGTACAATGGAGCTACATGATATTAATAGCAATTCTATGAGCTTTGAACTCTCTAGGGTACAGGAGAAGTTGAATAAAGCTAATAGAAGCCGTCATAAAAGTGTTCAGTTTGATGATAATTTACAACATGATGATAATCCAAGGTTGATCTATATCAGTGATCCCAAGAGAACTAATGACAAATACGAGTTCACAGGAAATGAGATAACGACCAGCAAGTACACATTGATAACCTTCTTACCGAAGAACCTCTTCATTCAGTTTCACCGTGTTGCATATCTTTACTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCACCTCTGGCAGTCTTTGGGAGAACTGTATCTCTTTTCCCCCTCCTGTTTGTTCTTTGTGTTACAGCTATTAAAGATGGCTATGAGGATTGGCGTAGACACAGATCAGATCGCAATGAGAACAATCGACAGGCTCTAGTGCTTCAATCTGATGAGTTCCGATTAAAAGTATGGAAAAAAATACGAGCAGGAGAAGTTGTAAAGATTCGTGCTGATGAGGCCATTCCTTGTGATATGGTTTTACTGGGGACAAGTGATCCTAGTGGCCTAGCTTACATCCAAACAATGAATTTGGACGGTGAGTCGAACTTGAAGACAAGGTATGCTAGACAGGAGACAGCATCAGCTGTAGCCGAGGGATGCTCGTTTTCTGGTCTTATTCGATGTGAACAACCTAACAGGAATATTTATGAGTTCACTGCCAACATGGAGTTCAACGGACACAAATTTCCCCTCAGTCAGTCAAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATCATTGGGGTGGTTGTCTATGCTGGACAAGAAACAAAAGCCATGTTAAACAGTGCAGTGTCACCTTCCAAGCGAAGCAAATTAGAGGGTTACATGAACAGGGAAACATTGTGGTTATCAATCTTCCTCTTTGTCATGTGTCTAGTTGTGGCTCTTGGAATGGGCTTATGGCTCACACATAGCAAGGACCGGCTTGATACCTTGCCATATTATAGGAAAACTTATTTCACTGGGAGGGACTATGGCAAAAAGTACAGGTTTTATGGGATACCTATGGAGACTTTTTTCTCCTTTTTGAGTTCTATTATAGTCTTTCAAATTATGATACCAATATCCCTTTATATTACAATGGAGGTGGTAAGACTGGGTCAGTCGTATTTCATGATTGAAGATAAGCACATGTATTGCAGAATCTCTGGGTCTAGGTTCCAGTGCAGGTCATTGAATATCAATGAGGATCTAGGTCAAGTTCGTTATGTATTTTCAGATAAAACAGGAACCCTCACTGAAAATAAAATGGAATTTAAAAAAGCAAGTGTATATGGGAAGAGTTATGGGAACAACTTACTCGAGGCATATTCATCAATATTGTATTCCGTTCCAGCTCTAGGGAGGAGGTGGAAACTTAAATCTGATGTTGCTGTTGATTCTGAACTTGTCAAATTGTTACACAAGGACTTAACTGGAGATGAAAAGATTGCCGCACATGAATTTTTCCTTACTTTGGCTGCATGCAACACTGTAATTCCTATTCTCACTGATGGCCCATCATCTAGTTATGGAAGTGGTGAATTACAGGAGGATGTAGAAACTATTGATTATCAGGGCGAGTCCCCAGATGAGCAAGCACTAGTCGCTGCAGCCTCTGCTTATGGATACACCCTTTTTGAGCGCACATCTGGGCATATTGTTCTTGATGTCAATGGTGAGAATTTAAGGTTAGATGTTCTGGGCTTGCATGAGTTTGATAGTGTGCGCAAAAGGATGTCTGTTGTTATCAGATTCCCTGACAACACTGTGAAGGTGCTGGTAAAAGGTGCTGATACTTCGATGTTGAGTATTTTAGCCAATGAATCAGAGAGGGAAGAACTTATCAAGCATGCAACTCAAAGCCAGTTATATGAATATTCATTACAAGGTTTGCGGACCCTTGTAGTTGCTGCTAGGGACCTTACAGATTCTGAATTTGAGCTATGGCAAAGCAGATATGAAGATGCAAGCACTTCACTGACTGATAGAGCAATAAAACTACGTCAGACAGCTGCTCTCATAGAGAGTGACCTAAAGCTTCTTGGTGCAACTGCTATTGAGGACAAGTTACAGGATGGTGTGCCTGAAGCCATTGAATCTCTTCGGCAGGCAGGAATAAAAGTTTGGATTCTGACTGGGGATAAGCAGGAGACAGCTATATCAATTGGCCTCTCTTGCAAATTGCTGACGTCAGATATGCAGTTGATTATTATTAATGGAAACTCTGAGGATGATTGCAGACAACTTTTAGCTGATGCTAAAGCAAAATATGGTGTGAAATCAACGCATTGCAGAAATCAGAATTCAAAGCTGAAGAAATGTGAGAATGATTGTCATGACATACGAAGACTTTCAAAGCCACCTGGTTGGGATGAGGAGGGGGAGGAGGGAATGCCGAATAAACCTCTAGCTCTAATAATAGATGGAAATAGCTTAGTGTACATTTTGGAGAAGGATCTGGAGTCAGAGCTTTTTGACCTTGCAACTTCATGCAATGTTGTGCTATGCTGTCGTGTTGCACCCTTGCAGAAAGCTGGAATTGTTGATTTGATCAAGAGTCGGACTGATGATATGACATTGGCAATAGGAGATGGGGCCAATGATGTGTCAATGATTCAGATGGCCGATGTAGGTGTTGGTATATGTGGACAGGAAGGGCGTCAAGCAGTAATGGCATCTGATTTTGCTATGGGACAATTTCGCTTTATAAAAAGATTACTTTTAGTGCATGGACACTGGAACTATCAACGTGTTGGCTACATGGTTCTTTACAACTTCTACCGAAACGCTGTTTTTGTCTTGATGCTCTTCTGGTTCATACTATTCACAGCATTCTCAACAACTTCAGCTTTGACCGATTGGAGTAGTGTGTTTTATTCTGTTATTTATACGTCTATCCCTACTATTTTTGTTGGTATTCTGGACAAAGACTTAAGTCACAAGACATTACTAAAATATCCAAAGCTCTATTGTACCGGCCATAGACACGAGGCATACAATATGCGTCTCTTTTGGTTCACAATGGTTGACACACTCTGGCAGAGTCTTGTTCTCTTCTATGTACCATTTTTCACTTATAGTGAGAGCACCATTGATATATGGAGCATGGGGAGTTTGTGGACCATAGCGGTTGTTATTCTTGTGAATGTGCACTTGGCAATGGATGTTCATCGTTGGGTATTTATTACCCATGCTGCAGTTTGGGGATCCATCATCATAACATATGCCTGCATGGTCGTGTTGGATTCAATTCCCATTTTTCCTAATTACTGGACGATTTTCAATCTGGCTAGGTCCCCTACCTATTGGCTGACTATATTGCTTATAATAGTTGTAGCATTGCTTCCACGTTATCTCTTCAAAGTTGTGCACCAAAGATTTTGGCCTTCAGATATTCAAATAGCGAGAGAAGCCGAAGTACTGAGAAAAGGTCACGGCGATTATTTGGGTTCAAAGCGAGATCAAGATTCCAATTAA | 3876 | 41.41 | MTSGQPLLASPESVSVVQYRSPSRNFSSVGCLCRSASFTSSSFDDVQSDVDDVKENSTSSVGDNSWSETCLIHSASLPKKKQFYSVGSRFPQKSPFDYPTQDRRRLVSWGTMELHDINSNSMSFELSRVQEKLNKANRSRHKSVQFDDNLQHDDNPRLIYISDPKRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVLQSDEFRLKVWKKIRAGEVVKIRADEAIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVAEGCSFSGLIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPSKRSKLEGYMNRETLWLSIFLFVMCLVVALGMGLWLTHSKDRLDTLPYYRKTYFTGRDYGKKYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEVVRLGQSYFMIEDKHMYCRISGSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKKASVYGKSYGNNLLEAYSSILYSVPALGRRWKLKSDVAVDSELVKLLHKDLTGDEKIAAHEFFLTLAACNTVIPILTDGPSSSYGSGELQEDVETIDYQGESPDEQALVAAASAYGYTLFERTSGHIVLDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMLSILANESEREELIKHATQSQLYEYSLQGLRTLVVAARDLTDSEFELWQSRYEDASTSLTDRAIKLRQTAALIESDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTSDMQLIIINGNSEDDCRQLLADAKAKYGVKSTHCRNQNSKLKKCENDCHDIRRLSKPPGWDEEGEEGMPNKPLALIIDGNSLVYILEKDLESELFDLATSCNVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFIKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWFILFTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHKTLLKYPKLYCTGHRHEAYNMRLFWFTMVDTLWQSLVLFYVPFFTYSESTIDIWSMGSLWTIAVVILVNVHLAMDVHRWVFITHAAVWGSIIITYACMVVLDSIPIFPNYWTIFNLARSPTYWLTILLIIVVALLPRYLFKVVHQRFWPSDIQIAREAEVLRKGHGDYLGSKRDQDSN | 1291 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 5944635 | 5950139 | - | evm.model.ptg000007l.840 | HCH9g0840 | 551472 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g0840 | 1291 | Gene3D | - | 522 | 540 | - | - | |
| HCH9g0840 | 1291 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 149 | 1270 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
| HCH9g0840 | 1291 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 550 | 827 | IPR023299 | GO:0000166(InterPro) | |
| HCH9g0840 | 1291 | Gene3D | - | 811 | 1035 | IPR023214 | - | |
| HCH9g0840 | 1291 | CDD | P-type_ATPase_APLT_Dnf-like | 175 | 1155 | - | - | |
| HCH9g0840 | 1291 | SFLD | C1.7: P-type atpase like | 528 | 1046 | - | - | |
| HCH9g0840 | 1291 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 173 | 1262 | IPR023298 | - | |
| HCH9g0840 | 1291 | Gene3D | - | 235 | 401 | - | - | |
| HCH9g0840 | 1291 | Gene3D | - | 656 | 796 | IPR023299 | GO:0000166(InterPro) | |
| HCH9g0840 | 1291 | NCBIfam | phospholipid-translocating P-type ATPase | 173 | 1270 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
| HCH9g0840 | 1291 | SUPERFAMILY | Calcium ATPase, transduction domain A | 256 | 397 | IPR008250 | - | |
| HCH9g0840 | 1291 | Gene3D | - | 554 | 568 | IPR023299 | GO:0000166(InterPro) | |
| HCH9g0840 | 1291 | Pfam | Phospholipid-translocating ATPase N-terminal | 159 | 224 | IPR032631 | - | |
| HCH9g0840 | 1291 | NCBIfam | HAD-IC family P-type ATPase | 965 | 1081 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH9g0840 | 1291 | NCBIfam | HAD-IC family P-type ATPase | 806 | 862 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH9g0840 | 1291 | NCBIfam | HAD-IC family P-type ATPase | 477 | 573 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| HCH9g0840 | 1291 | FunFam | Phospholipid-transporting ATPase | 810 | 1035 | - | - | |
| HCH9g0840 | 1291 | Pfam | haloacid dehalogenase-like hydrolase | 791 | 855 | - | - | |
| HCH9g0840 | 1291 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 546 | 552 | IPR018303 | - | |
| HCH9g0840 | 1291 | SUPERFAMILY | HAD-like | 539 | 1041 | IPR036412 | - | |
| HCH9g0840 | 1291 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 1023 | 1263 | IPR032630 | - | |
| HCH9g0840 | 1291 | SFLD | p-type atpase | 528 | 1046 | IPR044492 | - | |
| HCH9g0840 | 1291 | Gene3D | - | 541 | 553 | IPR023214 | - | |
| HCH9g0840 | 1291 | Pfam | E1-E2 ATPase | 256 | 501 | - | - | |
| HCH9g0840 | 1291 | Pfam | Cation transport ATPase (P-type) | 659 | 736 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH3g0149 | HCH-Chr3:953368 | HCH9g0840 | HCH-Chr9:5944635 | 1.90E-189 | dispersed | |
| HCH4g1491 | HCH-Chr4:11291545 | HCH9g0840 | HCH-Chr9:5944635 | 2.30E-190 | dispersed | |
| HCH9g0840 | HCH-Chr9:5944635 | HCH9g1360 | HCH-Chr9:45094899 | 3.70E-13 | dispersed | |
| HCH13g0299 | HCH-Chr13:1991655 | HCH9g0840 | HCH-Chr9:5944635 | 0.00E+00 | transposed | |
| HCH7g0131 | HCH-Chr7:879768 | HCH9g0840 | HCH-Chr9:5944635 | 2.40E-162 | transposed | |
| HCH1g0823 | HCH-Chr1:56880617 | HCH9g0840 | HCH-Chr9:5944635 | 1.10E-189 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH9g0840 | K14802 | - | csv:101206692 | 2195.24 |