Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0872 | ATGGCTGCTTTTGCTTATGTTTTGTTCGATAATAGTAATAATAATAATACTTCTTACGACAACAGCCGAGGTTGTAGTCCACTGACTAGCGGCGGCGGTTCCACCACCAGCGACGAACAACAACAACAACAACCGCCGCCACCGCAAAGGTTGGCTAACGGCGGGAAAATGGTGAGGAAGAGAATAGCTTCGGAAATGGAAATAGAAGGACTAAACCCTAATAATAATAACGCAGCGGGTTCCGGCGCCGTGCATCCGCGTTTCTGCCGCCGTACCACGACGGAACGGGATTTCGCGACGGTGAATGGGAATTCCAACTACTCCACTACTACTGCTACTACTATTCAATCTTCTACAACTTTGGTGACGTCAGCAGAGGGGTCAAATTCAAATCTTATCGTTGACAGTACTACAACTACTACTAATGATAATATTATTATTCAGAATCTAAATCCTGCAGTTTGTGGATTTTCTGGGCTGCCTTTATTTCCTCCTGAATCTAATCAGAACCAGAGATATAGTAGTGAAAACGACAACTCCTTCCCGGTTTTTAACTCCGGTGGTGGTGGTGCTGGTGGGTTTTCTTCTCTCTCCGCCGTTGGTTCCGCCATGGATGATTCTTCCGCCACCGCGTGGATTGACGGTATTATTAAAGATCTTATTAACAGTTCTTCTAATATTTCTATTCCTCAGCTTATTCAAAACGTCAGAGAAATTATCTATCCTTGTAATCCGAATCTCGCTAATCTTTTGGAGTTCAGGCTCCGTTCTTTGACGGACCCTAATTTCACCGCCGATGACCGGATTAGAAGACTTCCTTTACCGTTACCGTCACCGTCTCCTTCGCCGTTACCGGTAGTCGGCGTGAGGCCATACAATCACGGAGGGAATCCTAATCTCTCTACTTTTCCCTCACAGTCTCCGTATGTGAATCAAGATTCGTTTTTGCCATGGACGGGGAATCCTCCACCTCCGACGCCGCCTCCCCAGCAGCAGTCAGTTACCGGTACTCCCACGGCCGCGGGTGAAGAGCCGATTCAGCGGGTTCCCGGTCATCTGTCGTCGGTTGTTGTAGAATCTTCAAAGCAACAAGAACAGCAAAACCCTAATCCGGGTACCGGTGGGAACACGAACCCGACGACGACGGCGTTATTGATAAGAGAGATAAAAGAGGAAATGAGGCAGCAAAAGAGAGATGAAGAAGGATTACATCTCTTAACATTGCTTCTGCAATGTGCAGAAGCTGTTTCTGCTGATAATTTAGAAGAAGCAAACAAGATGTTGTTAGAAATTTCAGAACTTTCAACGCCATTTGGAACATCAGCTCAAAGGGTAGCTGCATATTTCTCAGAAGCAATGTCAGCCAGGCTAGTGAGTTCATGTCTCGGAATTTACGCGGCATTGCCACCGGCATTGGTGCCGGTGACTCATAGCCAAAAGATAGCCTCAGCGTTTCAGGTGTTTAATGGGATTAGTCCATTTGTTAAATTCTCTCATTTCACAGCAAATCAAGCAATTCAAGAAGCTTTTGAAAGGGAAGAGAGAGTTCACATTATAGACTTGGATATTATGCAAGGATTGCAATGGCCAGGGTTGTTTCATATCCTTGCGTCTCGGCCCGGGGGGCCGCCATATGTACGATTAACTGGACTTGGGACTTCTAAGGAGGTTTTGGAGGGTACTGGGAAGAGGCTTACTGAATTTGCTGAGAAATTGGGGCTCCCTTTCGATTTCTTTCCGGTCGCCGAGAAGATTGGGAATTTGGATTTGGAGAGGCTGAATGTTAGTAAGAGGGAAGCTGTTGCTGTTCATTGGATGCAGCATTCTCTTTATGAAGTTACTGGGTCGGATTCTAACACACTTTGGCTTTTGCAAAGATTAGCTCCAAAAGTAGTGACTGTGGTAGAACAAGACCTGAGCCATACAGGTTCATTCCTAGGAAGGTTTGTGGAAGCAATTCATTACTACTCAGCATTGTTCGACTCATTAGGTGTCAGCTACGGTGAAGAGAGTGAGGAAAGGCATTTGGTGGAGCAGCAGTTGTTGTCGAGGGAGATCCGTAACGTGCTCGCTGTCGGAGGGCCGTCGAGGAGCGGCGAAGTCAAGTTCCAGAACTGGAGGGAGAAGCTACAGCAATCAGGATTTAAGGGAGTTTCGTTAGCTGGAAATGCAGCAACTCAGGCCACTCTCCTCTTAGGCATGTTTCCCTCTGATGGATATACGCTTGTAGAAGATAATGGAACTCTGAAATTGGGATGGAAGGATCTTTGCTTGCTTACTGCTTCTGCTTGGAAACTGCCATTTCAAGCATCAAATCCTAATCCCATTCCTCGATATTAA | 2340 | 46.28 | MAAFAYVLFDNSNNNNTSYDNSRGCSPLTSGGGSTTSDEQQQQQPPPPQRLANGGKMVRKRIASEMEIEGLNPNNNNAAGSGAVHPRFCRRTTTERDFATVNGNSNYSTTTATTIQSSTTLVTSAEGSNSNLIVDSTTTTTNDNIIIQNLNPAVCGFSGLPLFPPESNQNQRYSSENDNSFPVFNSGGGGAGGFSSLSAVGSAMDDSSATAWIDGIIKDLINSSSNISIPQLIQNVREIIYPCNPNLANLLEFRLRSLTDPNFTADDRIRRLPLPLPSPSPSPLPVVGVRPYNHGGNPNLSTFPSQSPYVNQDSFLPWTGNPPPPTPPPQQQSVTGTPTAAGEEPIQRVPGHLSSVVVESSKQQEQQNPNPGTGGNTNPTTTALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPALVPVTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSKEVLEGTGKRLTEFAEKLGLPFDFFPVAEKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGVSLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKLPFQASNPNPIPRY | 779 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6250684 | 6253511 | + | evm.model.ptg000007l.872 | HCH9g0872 | 551504 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0872 | 779 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 386 | 764 | IPR005202 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER) | |
HCH9g0872 | 779 | ProSiteProfiles | GRAS family profile. | 396 | 765 | IPR005202 | - | |
HCH9g0872 | 779 | MobiDBLite | consensus disorder prediction | 274 | 380 | - | - | |
HCH9g0872 | 779 | Pfam | GRAS domain family | 406 | 765 | IPR005202 | - | |
HCH9g0872 | 779 | MobiDBLite | consensus disorder prediction | 318 | 332 | - | - | |
HCH9g0872 | 779 | MobiDBLite | consensus disorder prediction | 295 | 317 | - | - | |
HCH9g0872 | 779 | MobiDBLite | consensus disorder prediction | 354 | 380 | - | - | |
HCH9g0872 | 779 | MobiDBLite | consensus disorder prediction | 12 | 55 | - | - | |
HCH9g0872 | 779 | MobiDBLite | consensus disorder prediction | 12 | 49 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH13g0958 | HCH-Chr13:14118343 | HCH9g0872 | HCH-Chr9:6250684 | 4.50E-82 | dispersed | |
HCH14g0363 | HCH-Chr14:32631160 | HCH9g0872 | HCH-Chr9:6250684 | 4.10E-37 | dispersed | |
HCH5g1321 | HCH-Chr5:50121650 | HCH9g0872 | HCH-Chr9:6250684 | 2.00E-94 | dispersed | |
HCH6g0508 | HCH-Chr6:20554156 | HCH9g0872 | HCH-Chr9:6250684 | 2.60E-131 | dispersed | |
HCH6g0938 | HCH-Chr6:44180497 | HCH9g0872 | HCH-Chr9:6250684 | 4.90E-65 | dispersed | |
HCH8g0794 | HCH-Chr8:44538125 | HCH9g0872 | HCH-Chr9:6250684 | 1.70E-57 | dispersed | |
HCH8g1450 | HCH-Chr8:48990978 | HCH9g0872 | HCH-Chr9:6250684 | 3.20E-48 | dispersed | |
HCH9g0872 | HCH-Chr9:6250684 | HCH9g0424 | HCH-Chr9:2657757 | 7.10E-60 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
34174 | PF03514 | GRAS | 2.20E-126 | CL0063 | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH9g0872 | K27742 | - | csv:101205286 | 926.776 |