Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0877 ATGCTTAAACGCCCTAATAAATCACTACAATCCGATTCTCTCTCTAACAAGATCTATAGATTCAGAGGCGTTTTGCTTTTCATATCTGTTTCTCTTCTTCTTTTCGCTTTTGTTCGCTTTCTCATGCCTTCCAAAGAGGATTATTACTCTTTCAATAACCGTAAAGTTTCTCCTGATCAAAAATCGTCTTCTTTCAAGACGAGTTTTGCTGTTATTTTTGACGCTGGGAGCTCTGGGAGCCGTGTTCATGTCTTTTGCTTTGATGATCATCTTGATCTTATTCCTATTGGCAAAGATATCGAGCTTTTTGATCAACTTAAGCCTGGATTGAGTGCTTATGCTGATAACCCTAAGAAAGCTGCAGCTTCTTTAATTACTCTTTTGGAGAAAGCACAAAGTGTGGTTCCTCTAGAGTTGCGGTCAATGACCCCTGTTAGAGTTGGGGCAACTGCTGGCTTGAGAGCTCTGAAAGGTGATACGGCTGATAGAATATTGCAGGCGGTTAGGGATCTTCTGAGAGACAATAGCCCCCTCAAGTTGGAGCAAGATGGTGTGACTGTTATTGATGGTACTCAAGAGGGTTCTTATCAATGGGTGACAATAAACTACCTGCTTGGAAACTTGGGCAAAAAATATTCTGATACAGTTGGAGTAGTAGATCTTGGGGGAGGGTCTGTTCAAATGGCGTATGCCATCTCAGAGGAGGATGCTGCTCGATTATCAGATAGAGAGGGCGCGTACGTAAAAAAGATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTTACAGTTATTTGCATTATGGCCTACTAGCTGCTCGAGCAGAGATTTTGAGTGTCTCTGAAGATTCTAGCAATGACTGCATCCTGGCTGGTTTTGAAGGATCATACCAATATGGAGGAAAGGACTACAAAGCATCAGCTTCTCCATCTGGCTCCAGCTTGAATGGATGCAGAAGGACAGTTTTGAAGGCTCTCAAGGTTAATGAATCAACATGTACGCACATGAAGTGTACTTTTGGTGATGTTTGGAATGGAGGAGGAGGGGATGGCCAGAAGAATCTCTTTATCGCTTCATTTTTCTTTGATAGGGCTGCTGAGGCTGGTTTTGCTGATCCTAACAAGCCCGTTGCTAAAGTTCATCCTGCGGATTTTGAGGAAGCAGCTAAGCAGGCGTGCCAAATCAATGTTGAGGATGCCAAAATATACCCTAACGTCGAGAAGGATAACCTGCCATTCTTGTGTATGGATCTTGTATACCAATACACACTACTTGTTGATGGATTTGGTCTGGATCCATGGCAAGAGATCACATTGGTGAAGAAAGTTAAATACCACAATTCTTTGGTTGAAGCAGCATGGCCTCTAGGCAGTGCCATTGAGGCTGTCTCATCATTAGCCTAA 1404 42.74 MLKRPNKSLQSDSLSNKIYRFRGVLLFISVSLLLFAFVRFLMPSKEDYYSFNNRKVSPDQKSSSFKTSFAVIFDAGSSGSRVHVFCFDDHLDLIPIGKDIELFDQLKPGLSAYADNPKKAAASLITLLEKAQSVVPLELRSMTPVRVGATAGLRALKGDTADRILQAVRDLLRDNSPLKLEQDGVTVIDGTQEGSYQWVTINYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEEDAARLSDREGAYVKKMYLKGATYYLYVYSYLHYGLLAARAEILSVSEDSSNDCILAGFEGSYQYGGKDYKASASPSGSSLNGCRRTVLKALKVNESTCTHMKCTFGDVWNGGGGDGQKNLFIASFFFDRAAEAGFADPNKPVAKVHPADFEEAAKQACQINVEDAKIYPNVEKDNLPFLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYHNSLVEAAWPLGSAIEAVSSLA 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6297782 6302015 - evm.model.ptg000007l.877 HCH9g0877 551509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0877 467 FunFam Apyrase 1 189 444 - -
HCH9g0877 467 CDD NBD_sugar-kinase_HSP70_actin 71 230 - -
HCH9g0877 467 Gene3D Exopolyphosphatase. Domain 2 189 444 - -
HCH9g0877 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 463 IPR000407 GO:0016787(InterPro)
HCH9g0877 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 465 IPR000407 GO:0016787(InterPro)
HCH9g0877 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 188 203 IPR000407 GO:0016787(InterPro)
HCH9g0877 467 Gene3D - 69 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0566 HCH-Chr6:33190395 HCH9g0877 HCH-Chr9:6297782 1.60E-147 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0877 K14641 - csv:101220305 758.059