Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0913 | ATGGCGACCAAATTCTTATCTTTAGCATGTATTCGTACTCAAACCAGCCGGGATCTGACTCCACGGCCTCGTTATCCTTCTATGCCAAAATATCCAGCTGGGGTTTCCCTGCAAGAGACTAGTTTTCCAGGGACCGATACGACGGCGTTCTTTTCCGTTACGGGTATGACTTGCTCGGCTTGTGCTGGCTCCGTTGAGAAAGCTATCAAACGCCTTCCTGGGATTCGTGAAGCTGTCGTTGATGTTTTGAATGCCAAAGCTCGTGTCCAGTTTTACCCTTCTTTCGTCCATGTGGATCAAATATGTGAGGCTATTAACGATGCAGGCTTTCAAGCAGCCGTGATCGAAGATGATATGATTGAAAGATGTCGAATCCGTGTAATTGGAATGACCTGCACTTCTTGTTCCACGACTTTGGAATCTACTTTACAAGCAATTCGTGGGGTTCAGAATGCCCAAGTTGCATTAGCCACAGAAGAGGCAGAAGTTTGTTATGATCCAAGAATTTTGAGCTACAACCAGCTTCTCCAAGCTGTTGAAGATTCTGGATTTGAAGCTTTGCTTATCAGCACGGAAGAAGATATGAGCAAGATACAGTTAAAAGTGGATGGTGTGAGGACTGAGAATTCAATGAGAATGATTGGACACTCTCTTGAAGCACTTCCAGGTATCCAAGGTATCGATATTGATCCTGTGCTGAGAAAACTTTCCTTGTCTTACAAGCCAGATGTCACAGGACCTCGTAGTATGATCGAAGTGATTGAATCGACTGGATCTGGTCGATTTAGAGCATCAATATTTCCTGAAGGACAGGGTAGAGAGGCTTATAAAAAAGAGGAAATTAAGCAATATTACAGATCATTCTTATGGAGTCTGATATTTACAATTCCAATATTTTTAACCTCCATGGTCTTCATGTATATACCTGGTATTAAGGATGGACTAGATACCAAAATTGTTAATATGATGGGTGTTGGAGAGTTGCTGAGGTGGGTGCTATCAACTCCTGTGCAATTCATTATTGGAAGGCGATTCTATACTGGTTCTTACAAAGCATTGCGTCAAGGCTCTGCAAATATGGACGTTCTGATCGCATTAGGAACAAATGCAGCATACTTCTATTCAGTCTACTTGGTATTAAGATCCGCAACCTCAAGTGATTTCATGGCCACAGACTTCTTTGAGACCAGTTCCATGCTTATATCATTCATTCTCCTCGGGAAATATCTTGAGGTCTTGGCCAAGGGAAAGACATCAGAGGCTATTGCCAAGCTTATGAAGTTGGTGCCTGAAACAGCAACTTTGCTGACCCTTGATAACGATGGAAATGTCCTCAGGGAAGAAGAAATCGATAGTCGATTGATACAAAAGAATGATGTGATTAAAGTCATTCCAGGGGCAAAGGTTGCTTCAGATGGAGTTGTCACTTGGGGACAAAGTCATGTCAATGAAAGCATGATAACTGGGGAATCTAAGCCAGTGGCAAAGAGGATGGGCGATATGGTGATAGGAGGCACCTTGAATGAAAATGGAGTGCTACATGTGAAGGCAACACGTGTCGGATCTGAAAGTGCTCTTTCGCAGATTGTGCGACTCGTTGAATCCGCTCAGATGGCCAAGGCTCCAGTTCAAAAAATTGCAGATCGTGTCTCAAAATATTTTGTACCAATGGTTATTGTCTTTTCATTTACAACTTGGCTTGTCTGGTTTCTGACCGGGAAGTATGGTGGCTACCCAAAGTCCTGGATACCTTCTTCCATGGATAGCTTTGAGCTTGCACTCCAGTTCGGCATTTCGGTTATGGTCATAGCATGCCCTTGTGCTTTGGGCCTGGCAACTCCAACTGCTGTCATGGTTGGAACCGGAGTTGGTGCAACTAAAGGTGTTTTAATCAAAGGGGGCCAAGCATTAGAGAGTGCTCATAAGGTGAACTGCATTGTGTTTGACAAGACTGGAACTCTTACTGTGGGGAAGCCGGTTGTGGTCAATACAAAGCTATTAAAAAATATGGCTCTGAAAGAATTCTATGAATTAGTCGCCGCAACCGAGGTGAATAGCGAGCATCCATTGGCCAAAGCCATTGTTGAGTATGCTAAAAAGTTCAAAGAAGAGGATGAGAACCAAACTTGGCCAGAAGCCTTGGATTTTATCTCCATTACAGGTCATGGAGTTAAGGCCATTGTTCAAAACAAAGAGATAATTGCCGGAAACAAGAGTCTTATGATGGATCAGAACATCTTCATACCTGTTGAAGCTGAAGAAATATTAAAAGAAATTGAAGAAATGGCTCAAACTGGAATTTTGGTATCCATAGACAGGAAGTTGACTGGTGTTCTTGCCATATCTGACCCATTAAAACCAAGTGCACGTGATGTTATTTCCATACTTAAGTCAATGAAAGTTAAAAGCATCGTGGTGACAGGCGATAATTGGGGGACAGCAAAATCCATAGCCAAGGAGGTCGGAATTGATGACATAATTGCAGAAGCCAAACCCGAGCAGAAAGCAGAAGAAGTGAAGAAGTTGCAGTCTTTGGGCTACACGGTGGCAATGGTGGGAGATGGCATCAACGACTCGCCGGCACTCGTGGCTGCAGATGTAGGGATGGCAATTGGTGCGGGCACAGACATCGCCATCGAGGCAGCTGACATAGTTCTCATGAAAAGCAACTTGGAGGATGTCATAACAGCCATTGACCTTTCGAGGAAAACATTTTCCAGGATCCGTTTGAACTATATATGGGCTCTGGGTTACAATCTTCTCGGTATCCCAATCGCAGCGGGAGTCCTATTCCCATCTACTCGGTTTCGGTTGCCGCCATGGATTGCAGGAGCAGCAATGGCAGCCTCTTCAGTTAGTGTTGTTTGCAGTTCTCTCTTGCTCAAGTATTACAAACGACCAAAGAAACTAGATTCCCTTGAGATTCAAGGCATTAGAGTAGAATGA | 2946 | 43.79 | MATKFLSLACIRTQTSRDLTPRPRYPSMPKYPAGVSLQETSFPGTDTTAFFSVTGMTCSACAGSVEKAIKRLPGIREAVVDVLNAKARVQFYPSFVHVDQICEAINDAGFQAAVIEDDMIERCRIRVIGMTCTSCSTTLESTLQAIRGVQNAQVALATEEAEVCYDPRILSYNQLLQAVEDSGFEALLISTEEDMSKIQLKVDGVRTENSMRMIGHSLEALPGIQGIDIDPVLRKLSLSYKPDVTGPRSMIEVIESTGSGRFRASIFPEGQGREAYKKEEIKQYYRSFLWSLIFTIPIFLTSMVFMYIPGIKDGLDTKIVNMMGVGELLRWVLSTPVQFIIGRRFYTGSYKALRQGSANMDVLIALGTNAAYFYSVYLVLRSATSSDFMATDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMKLVPETATLLTLDNDGNVLREEEIDSRLIQKNDVIKVIPGAKVASDGVVTWGQSHVNESMITGESKPVAKRMGDMVIGGTLNENGVLHVKATRVGSESALSQIVRLVESAQMAKAPVQKIADRVSKYFVPMVIVFSFTTWLVWFLTGKYGGYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATKGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVNTKLLKNMALKEFYELVAATEVNSEHPLAKAIVEYAKKFKEEDENQTWPEALDFISITGHGVKAIVQNKEIIAGNKSLMMDQNIFIPVEAEEILKEIEEMAQTGILVSIDRKLTGVLAISDPLKPSARDVISILKSMKVKSIVVTGDNWGTAKSIAKEVGIDDIIAEAKPEQKAEEVKKLQSLGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLDSLEIQGIRVE | 981 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6734602 | 6739213 | + | evm.model.ptg000007l.913 | HCH9g0913 | 551545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0913 | 981 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 1 | 980 | - | - | |
HCH9g0913 | 981 | SUPERFAMILY | Calcium ATPase, transduction domain A | 447 | 533 | IPR008250 | - | |
HCH9g0913 | 981 | CDD | HMA | 51 | 113 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | ProSiteProfiles | Heavy-metal-associated domain profile. | 121 | 187 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | FunFam | Probable copper-transporting ATPase HMA5 | 750 | 909 | - | - | |
HCH9g0913 | 981 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 395 | 920 | IPR023298 | - | |
HCH9g0913 | 981 | Gene3D | - | 734 | 783 | IPR023299 | GO:0000166(InterPro) | |
HCH9g0913 | 981 | Gene3D | - | 654 | 733 | IPR023299 | GO:0000166(InterPro) | |
HCH9g0913 | 981 | ProSitePatterns | Heavy-metal-associated domain. | 53 | 82 | IPR017969 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | FunFam | ATPase copper transporting beta | 119 | 194 | - | - | |
HCH9g0913 | 981 | Pfam | haloacid dehalogenase-like hydrolase | 644 | 866 | - | - | |
HCH9g0913 | 981 | ProSitePatterns | Heavy-metal-associated domain. | 127 | 156 | IPR017969 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase 1 signature | 103 | 123 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase 1 signature | 48 | 73 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase 1 signature | 145 | 166 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase 1 signature | 74 | 97 | - | - | |
HCH9g0913 | 981 | SUPERFAMILY | HAD-like | 646 | 958 | IPR036412 | - | |
HCH9g0913 | 981 | ProSiteProfiles | Heavy-metal-associated domain profile. | 47 | 113 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | CDD | P-type_ATPase_Cu-like | 286 | 948 | - | - | |
HCH9g0913 | 981 | NCBIfam | HAD-IC family P-type ATPase | 400 | 934 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
HCH9g0913 | 981 | Gene3D | - | 415 | 537 | - | - | |
HCH9g0913 | 981 | FunFam | Copper-transporting ATPase HMA5 | 46 | 117 | - | - | |
HCH9g0913 | 981 | NCBIfam | heavy metal translocating P-type ATPase | 360 | 961 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
HCH9g0913 | 981 | PRINTS | P-type cation-transporting ATPase superfamily signature | 483 | 497 | - | - | |
HCH9g0913 | 981 | PRINTS | P-type cation-transporting ATPase superfamily signature | 799 | 809 | - | - | |
HCH9g0913 | 981 | PRINTS | P-type cation-transporting ATPase superfamily signature | 875 | 887 | - | - | |
HCH9g0913 | 981 | PRINTS | P-type cation-transporting ATPase superfamily signature | 777 | 788 | - | - | |
HCH9g0913 | 981 | PRINTS | P-type cation-transporting ATPase superfamily signature | 852 | 871 | - | - | |
HCH9g0913 | 981 | PRINTS | P-type cation-transporting ATPase superfamily signature | 647 | 661 | - | - | |
HCH9g0913 | 981 | SFLD | p-type atpase | 629 | 904 | IPR044492 | - | |
HCH9g0913 | 981 | NCBIfam | copper ion binding protein | 51 | 112 | IPR006122 | GO:0005507(InterPro) | |
HCH9g0913 | 981 | FunFam | Copper-transporting ATPase 1, putative | 415 | 537 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase signature | 556 | 570 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase signature | 925 | 939 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase signature | 345 | 364 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase signature | 417 | 435 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase signature | 829 | 846 | - | - | |
HCH9g0913 | 981 | PRINTS | Copper-transporting ATPase signature | 397 | 416 | - | - | |
HCH9g0913 | 981 | SUPERFAMILY | HMA, heavy metal-associated domain | 46 | 117 | IPR036163 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 649 | 655 | IPR018303 | - | |
HCH9g0913 | 981 | Gene3D | - | 193 | 266 | - | - | |
HCH9g0913 | 981 | SUPERFAMILY | HMA, heavy metal-associated domain | 192 | 260 | IPR036163 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | ProSiteProfiles | Heavy-metal-associated domain profile. | 196 | 262 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | SFLD | Haloacid Dehalogenase | 629 | 904 | - | - | |
HCH9g0913 | 981 | Gene3D | - | 44 | 115 | - | - | |
HCH9g0913 | 981 | Pfam | Heavy-metal-associated domain | 125 | 185 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | Pfam | Heavy-metal-associated domain | 51 | 110 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | Pfam | E1-E2 ATPase | 428 | 626 | - | - | |
HCH9g0913 | 981 | CDD | HMA | 125 | 186 | IPR006121 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | SUPERFAMILY | HMA, heavy metal-associated domain | 122 | 192 | IPR036163 | GO:0046872(InterPro) | |
HCH9g0913 | 981 | Gene3D | - | 614 | 909 | IPR023214 | - | |
HCH9g0913 | 981 | Gene3D | - | 120 | 192 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g1171 | HCH-Chr14:38516124 | HCH9g0913 | HCH-Chr9:6734602 | 1.90E-246 | dispersed | |
HCH2g1385 | HCH-Chr2:55631797 | HCH9g0913 | HCH-Chr9:6734602 | 2.60E-271 | dispersed | |
HCH5g0502 | HCH-Chr5:3416009 | HCH9g0913 | HCH-Chr9:6734602 | 0.00E+00 | dispersed | |
HCH9g0913 | HCH-Chr9:6734602 | HCH8g1049 | HCH-Chr8:46443646 | 8.60E-63 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH9g0913 | K17686 | - | csv:101218801 | 1694.09 |