Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0974 ATGGAAGGAAAGGGAAATGGATTTGCCAGTTTCATTGAAGGAGCACAGCCATATATAGCAATGATATCTCTTCAATTTGGATACTGTGGAATGAATATAATCACAAAGGTTGCTCTCAATCATGGCATGAGTCATTATGTTCTTGTTACTTATAGGCAAGCCTTTGCCACTGCAGCCCTTGCTCCTTTTGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAGATGACCTTTCGTATGTTCATGCAAATTTTCCTTCTGGGTCTGTTAGGTCCAGTGATTGATCAAAACTTCTATTATGCTGGTTTGAAGCTCACTTCTCCAACCTTCTCTTGTGCCTCCAGTAATATGCTTCCTGCAATGACATTCATCCTGGCTGTTCTTTGCAGGATGGAGAAGTTGGAGATAAAGAAAGTAAGATGCATAGCCAAGGTGGTGGGCACAATAGTCACAGTGGGAGGAGCCATATTGATGACATTATACAAAGGGAATGTCATAAACTTGTTCTGGTCTGATCATCTTCACCCTCTTCACTCAAATTACACCATGGAAACCAGTGATAAAGATTGGGTCAAGGGTTCCATTCTCCTCATTTTTGCCACTCTTGCTTGGTCCTTATTCTTCATCCTCCAGGCAGTGACACTGAAGAAGTACACAGCTCATCTCTCACTCACCACCCTTGTGTGCTTCTTGGGGACTCTGCAGTCTATGGCAGTCACTTTTGTGATGGAACAGAAATCTTCTGTTTGGAATATTGGTTGGAATATGAATCTTCTTGCTGCAGCTTATGCTGGAATTGTGTCATCAAGTATAGCATATTATGTTCAAGGGATGGTTATGCAAAAGAGAGGGCCTGTTTTTGTCACTGCATTTAGCCCTTTGATGATGATCATTGTAGCCATTATGGGCTCTTTCATGCTTTCTGAGAAAATTTATAGTGGACGTGTTCTTGGAGGTGTTGTGATAGTGATGGGGCTATATTCTGTGCTGTGGGGAAAGTACAAAGATTACAAAGAGAAGGATGCAGAAGAAGCCTTTGTTGAACCAGTGAAGGTATTTGTAGGAAACTTTAGTGTTGGAAAGTTGGCTACTGTACTTGAAGAAGACGAGTCGTCGCCATCAGACGACATCGAAATGCAGAAGAACAACACAACTCCCATTGTAGTCAATATTGCTTCACTTCCATGCCCACCAAAAGCTTAA 1200 42.0 MEGKGNGFASFIEGAQPYIAMISLQFGYCGMNIITKVALNHGMSHYVLVTYRQAFATAALAPFAFFLERKVRPKMTFRMFMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCASSNMLPAMTFILAVLCRMEKLEIKKVRCIAKVVGTIVTVGGAILMTLYKGNVINLFWSDHLHPLHSNYTMETSDKDWVKGSILLIFATLAWSLFFILQAVTLKKYTAHLSLTTLVCFLGTLQSMAVTFVMEQKSSVWNIGWNMNLLAAAYAGIVSSSIAYYVQGMVMQKRGPVFVTAFSPLMMIIVAIMGSFMLSEKIYSGRVLGGVVIVMGLYSVLWGKYKDYKEKDAEEAFVEPVKVFVGNFSVGKLATVLEEDESSPSDDIEMQKNNTTPIVVNIASLPCPPKA 399
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 7272502 7274686 - evm.model.ptg000007l.974 HCH9g0974 551606
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0974 399 PANTHER WAT1-RELATED PROTEIN 19 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
HCH9g0974 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 159 - -
HCH9g0974 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 333 - -
HCH9g0974 399 Pfam EamA-like transporter family 31 149 IPR000620 GO:0016020(InterPro)
HCH9g0974 399 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0160 HCH-Chr12:855011 HCH9g0974 HCH-Chr9:7272502 7.00E-69 dispersed
HCH13g0120 HCH-Chr13:760102 HCH9g0974 HCH-Chr9:7272502 1.90E-87 dispersed
HCH1g0598 HCH-Chr1:54870536 HCH9g0974 HCH-Chr9:7272502 6.90E-128 dispersed
HCH2g0169 HCH-Chr2:13568959 HCH9g0974 HCH-Chr9:7272502 6.20E-62 dispersed
HCH8g0033 HCH-Chr8:1313879 HCH9g0974 HCH-Chr9:7272502 1.20E-28 dispersed
HCH8g0978 HCH-Chr8:45909490 HCH9g0974 HCH-Chr9:7272502 2.30E-56 dispersed
HCH8g1139 HCH-Chr8:47039148 HCH9g0974 HCH-Chr9:7272502 2.40E-63 dispersed
HCH9g0164 HCH-Chr9:979713 HCH9g0974 HCH-Chr9:7272502 8.70E-42 dispersed
HCH9g0165 HCH-Chr9:984966 HCH9g0974 HCH-Chr9:7272502 1.10E-47 dispersed
HCH9g0645 HCH-Chr9:4288877 HCH9g0974 HCH-Chr9:7272502 7.00E-93 dispersed
HCH6g1508 HCH-Chr6:48637171 HCH9g0974 HCH-Chr9:7272502 8.10E-78 transposed
HCH9g0974 HCH-Chr9:7272502 HCH9g1265 HCH-Chr9:36718999 3.10E-136 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0974 - - - 0.0