Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g0974 | ATGGAAGGAAAGGGAAATGGATTTGCCAGTTTCATTGAAGGAGCACAGCCATATATAGCAATGATATCTCTTCAATTTGGATACTGTGGAATGAATATAATCACAAAGGTTGCTCTCAATCATGGCATGAGTCATTATGTTCTTGTTACTTATAGGCAAGCCTTTGCCACTGCAGCCCTTGCTCCTTTTGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAGATGACCTTTCGTATGTTCATGCAAATTTTCCTTCTGGGTCTGTTAGGTCCAGTGATTGATCAAAACTTCTATTATGCTGGTTTGAAGCTCACTTCTCCAACCTTCTCTTGTGCCTCCAGTAATATGCTTCCTGCAATGACATTCATCCTGGCTGTTCTTTGCAGGATGGAGAAGTTGGAGATAAAGAAAGTAAGATGCATAGCCAAGGTGGTGGGCACAATAGTCACAGTGGGAGGAGCCATATTGATGACATTATACAAAGGGAATGTCATAAACTTGTTCTGGTCTGATCATCTTCACCCTCTTCACTCAAATTACACCATGGAAACCAGTGATAAAGATTGGGTCAAGGGTTCCATTCTCCTCATTTTTGCCACTCTTGCTTGGTCCTTATTCTTCATCCTCCAGGCAGTGACACTGAAGAAGTACACAGCTCATCTCTCACTCACCACCCTTGTGTGCTTCTTGGGGACTCTGCAGTCTATGGCAGTCACTTTTGTGATGGAACAGAAATCTTCTGTTTGGAATATTGGTTGGAATATGAATCTTCTTGCTGCAGCTTATGCTGGAATTGTGTCATCAAGTATAGCATATTATGTTCAAGGGATGGTTATGCAAAAGAGAGGGCCTGTTTTTGTCACTGCATTTAGCCCTTTGATGATGATCATTGTAGCCATTATGGGCTCTTTCATGCTTTCTGAGAAAATTTATAGTGGACGTGTTCTTGGAGGTGTTGTGATAGTGATGGGGCTATATTCTGTGCTGTGGGGAAAGTACAAAGATTACAAAGAGAAGGATGCAGAAGAAGCCTTTGTTGAACCAGTGAAGGTATTTGTAGGAAACTTTAGTGTTGGAAAGTTGGCTACTGTACTTGAAGAAGACGAGTCGTCGCCATCAGACGACATCGAAATGCAGAAGAACAACACAACTCCCATTGTAGTCAATATTGCTTCACTTCCATGCCCACCAAAAGCTTAA | 1200 | 42.0 | MEGKGNGFASFIEGAQPYIAMISLQFGYCGMNIITKVALNHGMSHYVLVTYRQAFATAALAPFAFFLERKVRPKMTFRMFMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCASSNMLPAMTFILAVLCRMEKLEIKKVRCIAKVVGTIVTVGGAILMTLYKGNVINLFWSDHLHPLHSNYTMETSDKDWVKGSILLIFATLAWSLFFILQAVTLKKYTAHLSLTTLVCFLGTLQSMAVTFVMEQKSSVWNIGWNMNLLAAAYAGIVSSSIAYYVQGMVMQKRGPVFVTAFSPLMMIIVAIMGSFMLSEKIYSGRVLGGVVIVMGLYSVLWGKYKDYKEKDAEEAFVEPVKVFVGNFSVGKLATVLEEDESSPSDDIEMQKNNTTPIVVNIASLPCPPKA | 399 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 7272502 | 7274686 | - | evm.model.ptg000007l.974 | HCH9g0974 | 551606 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g0974 | 399 | PANTHER | WAT1-RELATED PROTEIN | 19 | 344 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| HCH9g0974 | 399 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 51 | 159 | - | - | |
| HCH9g0974 | 399 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 236 | 333 | - | - | |
| HCH9g0974 | 399 | Pfam | EamA-like transporter family | 31 | 149 | IPR000620 | GO:0016020(InterPro) | |
| HCH9g0974 | 399 | Pfam | EamA-like transporter family | 191 | 329 | IPR000620 | GO:0016020(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0160 | HCH-Chr12:855011 | HCH9g0974 | HCH-Chr9:7272502 | 7.00E-69 | dispersed | |
| HCH13g0120 | HCH-Chr13:760102 | HCH9g0974 | HCH-Chr9:7272502 | 1.90E-87 | dispersed | |
| HCH1g0598 | HCH-Chr1:54870536 | HCH9g0974 | HCH-Chr9:7272502 | 6.90E-128 | dispersed | |
| HCH2g0169 | HCH-Chr2:13568959 | HCH9g0974 | HCH-Chr9:7272502 | 6.20E-62 | dispersed | |
| HCH8g0033 | HCH-Chr8:1313879 | HCH9g0974 | HCH-Chr9:7272502 | 1.20E-28 | dispersed | |
| HCH8g0978 | HCH-Chr8:45909490 | HCH9g0974 | HCH-Chr9:7272502 | 2.30E-56 | dispersed | |
| HCH8g1139 | HCH-Chr8:47039148 | HCH9g0974 | HCH-Chr9:7272502 | 2.40E-63 | dispersed | |
| HCH9g0164 | HCH-Chr9:979713 | HCH9g0974 | HCH-Chr9:7272502 | 8.70E-42 | dispersed | |
| HCH9g0165 | HCH-Chr9:984966 | HCH9g0974 | HCH-Chr9:7272502 | 1.10E-47 | dispersed | |
| HCH9g0645 | HCH-Chr9:4288877 | HCH9g0974 | HCH-Chr9:7272502 | 7.00E-93 | dispersed | |
| HCH6g1508 | HCH-Chr6:48637171 | HCH9g0974 | HCH-Chr9:7272502 | 8.10E-78 | transposed | |
| HCH9g0974 | HCH-Chr9:7272502 | HCH9g1265 | HCH-Chr9:36718999 | 3.10E-136 | wgd |
Pathway information