Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g1132 | ATGGAGGATTTCCAAAGCTACATCATTCTCTTCCTCGTTTGGCTAATTTCAACCATAACAATTCGAACCATTTTTGCAAGGAAAAGAACAAACTCTCGTCTTCCTCCAAGCCCTCTAGCCCTTCCTATCATCGGCCATCTCCATCTCCTCGGACCATTACCTCACCAAGCTTTTCATAAGCTATCAAACCGCCATGGACCCCTTATTCACCTCTTCCTCGGATCCGTCCCTTGCCTAGTCGTTTCCTCTTCAGAGATGGCTAAAGAATTCCTCAAAACTCATGAATCTTCCTTTTCAAATAGACCCCATTTGGCTGCAGTTGACTATTTAACCTACGGCTCTGCTGATTTCTCCTTTGCTCCCTATGGACCTTACTGGAAGTTCATGAAAAAGCTTTGCATGTCGGAACTCCTCGGTGGCCGGACACTCGATCATCTCGGTCCGGTTAGGCACGACGAGATGAGGCGGTTTTTATCGATGTTGTGGAGGAAGGCGGAGGAGGGGGAGGAAGTTGATATAGGAGGAGAGCTTCTGAGGCTATCAAACAATGTTATATCAAGAATGACATTGAGTAAGCGATGTTCAGAGAAAGAAAATGAAGCTGATGAAATAAGGAAGCTGGTGAAGGATATATCATTGCTAACAGGGACGTTTAATCTTTCAGATTATATTTGGTTTTGCAAGAATTTGGATTTGCAGGGCCTTAAAAGGAGGTTGAAGGAAGTTAGAGATAGATTTGATGAAATGATGGAGAGGATAATGAAGGAGCATGAAGTGAATAGAAAGATGGAGATCATGGTTGGATCAGAGGATGATGCCAAAGTGAAGGATTTGCTTCATATTTTGCTTGATAGGTTTGAGGATGAAAACGCTGAGGTGAAATTAACAAGAGAAAACATCAAGGCCTTTGTCCTGGACATATTTGCAGCTGGGACAGACACATCTGCAATTACAACAGAATGGGCACTGGCAGAGCTAATCAACCACCCAAAAATAATGAAGAAAGCCAAACAAGAACTTGATACAGTTGTAGGAAAGAGCAAATTAGTGGAAGAATCAGATATTGTAAATCTTCCATATCTCCAAGCAATAGTAAAAGAGACACTAAGGCTTCATTCAAGTCCATTGATAGTAAGAGAGTCAACAGAAAACTGCATGATAAATGGATACGAGATTCCAGCAAAAACTCAGTTGTATGTGAATGTATGGGCCATTGGAAGAGACCCAAATCATTGGGAAAACCCACTCGAGTTTAAACCAGAGAGATTTATAGATAAAGATGGGAGTGGAAAGAGTGTGAATAATTCAGATTTGAGAGGACAGAATTTCCAGCTTTTGCCATTTGGGAGTGGAAGAAGAAGCTGCCCTGGAACCACACTTGCATTGCTGATGGTTCAGACAACTCTTGCTTCAATGGTTCAATGCTTTGATTGGAAAGTTAATGGAGGAGATGGAAAAGTTGATATGGAAGAAGGGCCTGGCCTTACGCTTCCTAGGGCTAAGCCTTTAGTTTGTGTTCCAATTGCTTGTTTTAATCCTTTTCCAACAGTCTGA | 1554 | 41.96 | MEDFQSYIILFLVWLISTITIRTIFARKRTNSRLPPSPLALPIIGHLHLLGPLPHQAFHKLSNRHGPLIHLFLGSVPCLVVSSSEMAKEFLKTHESSFSNRPHLAAVDYLTYGSADFSFAPYGPYWKFMKKLCMSELLGGRTLDHLGPVRHDEMRRFLSMLWRKAEEGEEVDIGGELLRLSNNVISRMTLSKRCSEKENEADEIRKLVKDISLLTGTFNLSDYIWFCKNLDLQGLKRRLKEVRDRFDEMMERIMKEHEVNRKMEIMVGSEDDAKVKDLLHILLDRFEDENAEVKLTRENIKAFVLDIFAAGTDTSAITTEWALAELINHPKIMKKAKQELDTVVGKSKLVEESDIVNLPYLQAIVKETLRLHSSPLIVRESTENCMINGYEIPAKTQLYVNVWAIGRDPNHWENPLEFKPERFIDKDGSGKSVNNSDLRGQNFQLLPFGSGRRSCPGTTLALLMVQTTLASMVQCFDWKVNGGDGKVDMEEGPGLTLPRAKPLVCVPIACFNPFPTV | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 14652877 | 14655017 | + | evm.model.ptg000007l.1132 | HCH9g1132 | 551764 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g1132 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH9g1132 | 517 | CDD | CYP93 | 66 | 507 | - | - | |
| HCH9g1132 | 517 | SUPERFAMILY | Cytochrome P450 | 28 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | Coils | Coil | 232 | 256 | - | - | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PANTHER | CYTOCHROME P450 93A3-LIKE | 7 | 508 | - | - | |
| HCH9g1132 | 517 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | Pfam | Cytochrome P450 | 35 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | Gene3D | Cytochrome P450 | 25 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1132 | 517 | FunFam | Cytochrome P450 family protein | 26 | 505 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH6g0342 | HCH-Chr6:5330015 | HCH9g1132 | HCH-Chr9:14652877 | 7.00E-117 | dispersed | |
| HCH6g0343 | HCH-Chr6:5374454 | HCH9g1132 | HCH-Chr9:14652877 | 9.10E-120 | dispersed | |
| HCH8g1433 | HCH-Chr8:48908128 | HCH9g1132 | HCH-Chr9:14652877 | 3.30E-85 | dispersed | |
| HCH12g0870 | HCH-Chr12:5714016 | HCH9g1132 | HCH-Chr9:14652877 | 3.80E-110 | transposed | |
| HCH8g1251 | HCH-Chr8:47794809 | HCH9g1132 | HCH-Chr9:14652877 | 6.50E-102 | transposed | |
| HCH11g0586 | HCH-Chr11:11243630 | HCH9g1132 | HCH-Chr9:14652877 | 1.10E-114 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH9g1132 | K24188 | - | csv:101213143 | 802.742 |