Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g1264 | ATGGCTCTCGCTCTCATCGCTCTCTCTCTTATCTTCCTCATCCTCGCTTACAACCTCTATCAACGGCTGAGATATAAACTCCCTCCAGGCCCACGGCCGCTACCAGTCGTCGGAAACCTTTACGATATAAAGCCGGTGAGATTCCGATGCTATGCGGAGTGGGCTCAGAATTTCGGACCTATAATATCGGTATGGTTTGGATCCACATTAAACGTGATAGTGTCAAATACGGAACTGGCTAAAGAATTGTTGAAGGAGAATGATCAGCAGTTAGCGGACCGGCATCGGAGCCGATCGGCAGCGAGGTTCAGTAGAGATGGAAAGGATCTTATTTGGGCTGATTACGGACCTCATTACGTGAAAGTGAGGAAAGTTTGTACGATCGAGCTTTTCTCTCCGAAGAGGCTTGAGTCTCTTAGACCCATTAGAGAAGATGAGGTTACTGCTATGGTTGAAGACGTTTTTAAGGATTCTACTAATCCAGAGAACCATGGAAAGAGTTTAGAATTGAGGAAGTATTTGGGAGCAGTGTCATTCAACAACATCACAAGACTTGCATTTGGTAAAAGGTTTGTGAACTCGGATGGCATAATGGACGAGCAGGGGCTTGAATTCAAGGCCATTGTATCCAACGGCATTAAGATCGGTGCTTCCCTGGCCATGGCTGAGCACATCCCATGGCTCCGCTGGATGTTTCCACTCGAAGAAGAGGCATTTGCCAAGCACGCTGCCCGTCGTGATCGTCTCACTCGCGTCATCATGGAAGAGCACACGCAGGCTCGTAACAAGAGTGGCAATGTCAAGAATCACTTCTTTGATGCCCTTGTTACTTTGAAAGATAAATATGACCTTAGCGAAGACACCATCATTGGACTCCTCTGGGACATGATCACAGCGGGAATGGACACAACTTCCATCTCGGTTGAATGGGCAATGGCTGAGATCGTCAAGAACCCAAGAGTACAACAAAAGGTCCAAGAAGAGTTAGATAATGTAATTGGTTTAGATCGGATTATGACAGAGCTTGACTTCTCAAATCTCCCTTATCTCCAATGTGTTGTCAAAGAAGCAATGAGATTACATCCGCCAACGCCCCTCATGCTGCCTCACCGTGCTAATGCAGATGTCAAAATCGGTGGCTACGACATACCAAAGGGCTCTAATGTCCATGTCAATGTATGGGCGGTAGCTCGTGACCCAGCGGTATGGAAAAATCCACTTGAATTTCGACCAGAGAGATTCCTTGAGGAGGATGTTGATATGAAAGGTCATGATCTTCGGTTGCTTCCGTTTGGGTCCGGTCGACGGGTGTGCCCTGGAGCTCAACTTGGTATCAATTTGGTTACATCCATGTTGGGTCATTTGCTGCATCACTTTGAATGGCGGCCATCATCGGGATTGTCGCCGGAGGAGATTGATATGTCTGAAAGCCCAGGGATGGTGACCTACATGAGGACTCCACTGTTGGCTGTTGCTAGTCCGAGGTTGCCTTCTGAATTGTACGAACGTGTGGCTGTGGATATGTAA | 1527 | 47.48 | MALALIALSLIFLILAYNLYQRLRYKLPPGPRPLPVVGNLYDIKPVRFRCYAEWAQNFGPIISVWFGSTLNVIVSNTELAKELLKENDQQLADRHRSRSAARFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVTAMVEDVFKDSTNPENHGKSLELRKYLGAVSFNNITRLAFGKRFVNSDGIMDEQGLEFKAIVSNGIKIGASLAMAEHIPWLRWMFPLEEEAFAKHAARRDRLTRVIMEEHTQARNKSGNVKNHFFDALVTLKDKYDLSEDTIIGLLWDMITAGMDTTSISVEWAMAEIVKNPRVQQKVQEELDNVIGLDRIMTELDFSNLPYLQCVVKEAMRLHPPTPLMLPHRANADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPLEFRPERFLEEDVDMKGHDLRLLPFGSGRRVCPGAQLGINLVTSMLGHLLHHFEWRPSSGLSPEEIDMSESPGMVTYMRTPLLAVASPRLPSELYERVAVDM | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 36129205 | 36134261 | - | evm.model.ptg000007l.1264 | HCH9g1264 | 551896 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g1264 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH9g1264 | 508 | SUPERFAMILY | Cytochrome P450 | 28 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PANTHER | CYTOCHROME P450 98A9 | 4 | 502 | - | - | |
| HCH9g1264 | 508 | Pfam | Cytochrome P450 | 28 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | CDD | CYP98 | 58 | 490 | - | - | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 177 | 195 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 288 | 305 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 308 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 351 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | Gene3D | Cytochrome P450 | 20 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1264 | 508 | FunFam | Cytochrome P450 | 21 | 499 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0664 | HCH-Chr12:4048622 | HCH9g1264 | HCH-Chr9:36129205 | 2.40E-48 | dispersed | |
| HCH2g0975 | HCH-Chr2:53060292 | HCH9g1264 | HCH-Chr9:36129205 | 9.20E-77 | dispersed | |
| HCH3g1508 | HCH-Chr3:53046371 | HCH9g1264 | HCH-Chr9:36129205 | 2.00E-71 | dispersed | |
| HCH9g1264 | HCH-Chr9:36129205 | HCH14g0531 | HCH-Chr14:34236760 | 3.50E-84 | dispersed | |
| HCH9g1264 | HCH-Chr9:36129205 | HCH3g0380 | HCH-Chr3:2401957 | 3.40E-79 | transposed | |
| HCH9g1264 | HCH-Chr9:36129205 | HCH8g1432 | HCH-Chr8:48903513 | 3.40E-79 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH9g1264 | K09754 | - | cit:102624231 | 863.603 |