Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g1267 | ATGCATTATCTTCATGGGGCTTTATCAGAAACTATGCGCATGTACCCGCCTGTACCGGTGGACACGAAAGCTTGCCTAAATGATGATATCTTATTGGACGGTACATTTATCGGTAAGAGTTGGTTCGTGACTTACCATTCTTATGCTATGGGAAGGATGGAGAGCTTGTGGGGAAGGAACTATGATGAATTTTTACCGGAACGGTGGCTGGAAATTGGAATTTATCGACCGGAGAACCCATTGCGGTTTCAGATATTTCATGAAGGGCCTAGAATGTGTCTTGGAAAAGACATGGCTTATATTCAGATGAAGTCTATAGCAGCAGCGGTGGTTGAGAGGTTTGAGATTGGTGTGGACGAAAAGAACAAGTTTCCACAGCACTTGTTGTCGCTGACTTTGAGAATGAAAGATGGGTTACATGTGAGAGTGAACAAGAAAGAGATGGGGGTTAACACTTGA | 459 | 43.57 | MHYLHGALSETMRMYPPVPVDTKACLNDDILLDGTFIGKSWFVTYHSYAMGRMESLWGRNYDEFLPERWLEIGIYRPENPLRFQIFHEGPRMCLGKDMAYIQMKSIAAAVVERFEIGVDEKNKFPQHLLSLTLRMKDGLHVRVNKKEMGVNT | 152 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 37110165 | 37110623 | - | evm.model.ptg000007l.1267 | HCH9g1267 | 551899 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g1267 | 152 | Pfam | Cytochrome P450 | 1 | 128 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1267 | 152 | PANTHER | CYTOCHROME P450 | 1 | 139 | - | - | |
| HCH9g1267 | 152 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 86 | 95 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH9g1267 | 152 | Gene3D | Cytochrome P450 | 1 | 150 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1267 | 152 | SUPERFAMILY | Cytochrome P450 | 1 | 145 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1267 | 152 | PRINTS | E-class P450 group I signature | 5 | 23 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1267 | 152 | PRINTS | E-class P450 group I signature | 93 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1267 | 152 | PRINTS | E-class P450 group I signature | 83 | 93 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g1267 | 152 | PRINTS | E-class P450 group I signature | 47 | 71 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH9g1267 | HCH-Chr9:37110165 | HCH1g0254 | HCH-Chr1:41739573 | 6.70E-07 | dispersed | |
| HCH9g1267 | HCH-Chr9:37110165 | HCH9g1269 | HCH-Chr9:37181708 | 3.40E-83 | proximal | |
| HCH1g0243 | HCH-Chr1:39877282 | HCH9g1267 | HCH-Chr9:37110165 | 1.30E-28 | wgd |
Pathway information