Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g1348 ATGGCATCAATGATGAAGTCTATTTTCTTCGTTATTCTGCTTCTTCTGTTCCCTGTTATGGGATATTGCAAGGATCATAAACCACAACAAGAAGCTTACATTGTTTACTTTGGAGAACACAGTGGAGAGAAAGCGTTATATGAAATAGAAGCAAATCATCACTCTTATTTGCTTTCTGTTAAAGATGACAATCAAGAAGATGCCAAGTCTTCTCTTCTTTATAGCTACAAACACACCATCAATGGCTTTGCTGCTCTTCTTACGAAACAACAAGCTTCCAAACTCAAAGATATGGAAGAGGTGATATCCGTTATTCCGAATCAAGAATACAAAATGCACACAACAAGGTCATGGGAGTTTTCAGGCGTTGAACAAGATGAACCAAAACCTAATGACTTGGTTTCCCAAGCTCAACATGGAAAAGATGTCATCGTTGCCATTATGGATAGCGGTGTGTGGCCAGAATCTAAAAGTTTTAGTGATGGAAAGATGGGACCCATTCCAAAATCATGGAATGTGAATGGAATTTGTCAGACAGGAACTGCTTTTAATGCATCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTCAGTGGTTATGAGAGCTTTCACGGTCCTCTTAATGAGACACAAGACTACAAATCTCCCCGTGACAAAGATGGTCATGGATCTCACACAGCTTCAATTGTCGGTGGTCGAAGAGTCCATAATGTCTCTGCTTTTCATGGCGTTGCCAGCGGCACTGCTTCTGGTGGCGCTCCAAATGTGAGACTTGCCATATACAAAGTCTGTTGGGCAGCTCCCAATCAAATGAAAGCCAATGGAAACACTTGCTTCAACACAGACATACTGGCTGCCATGGATGATGCCATTGCTGATGGGGTTGATGTTATGAGCTTATCACTTGGAACTGCTAAGCATACCAGTTATATGGAAGATGCTGTTGCTATTGGAGCATTGCATGCCCTTAAGAAAGACATTGTAGTGTCTGCTAGTGCCGGCAGCTTTGGTCCTATTCCTTCCAATTTGGCTAATGTTGCTCCATGGATCATAACTGTTGGAGCTAGTACTATAGACACAGAATTTTACTCTAATGTTGTTCTAGGAAATGGACTGAACATCGAGGGAATGTCAATGTCTCCATTGAAGATGGACAACGAGATGTATCCATTAGTATATGCAGGTTATATTTCTAATGAAAATGTAACCCAATACCAAGCAGGACAGTGCCTTCCAAACTTTCTTTCACCTGAAAAAGCAAAGGGGAAGATAGTATTATGCATGAGAGGAATGGGAGAAGAAATATATACCAGTAGCTTGGAAGTGAAAAGGGCTGGTGGAGTTGGAATGATATTAGCAGATATCCCACAACTTGGAAGCAAGCCATATAGTTATCCTCATTTTCTTCCTGCCACGGTTGTGTCTTATGATGATGCAAACACCATCATGAATTACATTGGCACTTGCAATTGTATGCACCCAAAGGCAAACATTCTTCCGCCAACCACCGTGTATGGCTCCAAGCCGGCTCCACAAATGGCTGAGTTTTCAAGTAGAGGTCCTAATACTATTGACCCCTACATCCTCAAGCCTGACATAACAGCTCCAGGAGTTAATATATTAGCAGCATGGACTGAAGAGGATTCACCCACAAGGCTACCGCGAGATATAGATTCTCGAGTTGTTCAATACAATCTGTTTTCTGGAACCTCAATGTCTTGCCCACATGTATCTGCTGCTGCAGCCCTTCTTAAAGCCGTTCACCCTGATTGGAGTAGTGCTGCTATAAGATCTGCCCTCATGACGACCGCTACAACAACCGACTCAACGGGTTCATTGATGACCGAAGAAATAGATGGCAGCTTAGCAACTCCATTTGCATATGGGGCCGGCCACTTCCGACCCTCATTGGCAGCCGACCCTGGCCTAGTATATGATGCAAACTACACACACTACCTTGACTACCTATGTAGCCTTGGGATGAACAATACTGATACGACATTCAAGTGTCCATCAGAAGTTGCTCCTTCATTCAACCTCAATTACCCTTCAATCGCAATCCCGAATTTCAGAGGGTCGGTGAGCGTGGAAAGGACTGTTACAAATGTTGGTGGAAACAACACAGTGTATTACTTCTATAGTGACCCACCAACAGGAATTACAATAACATCTTCACCAAATGTCTTGGAATTTGATAAAGTTGGTCAGAAGAAGAACTTCACCATAACAGTCGCCGGACACGGGCTAATCGAAGTTGATCAAAACGGACACTCTTTTGGTTGGTACACTTGGAGTGATGGAGTCCACAACGTCAGAAGTCCGATTGCACTCTCATTTACTTAA 2349 42.78 MASMMKSIFFVILLLLFPVMGYCKDHKPQQEAYIVYFGEHSGEKALYEIEANHHSYLLSVKDDNQEDAKSSLLYSYKHTINGFAALLTKQQASKLKDMEEVISVIPNQEYKMHTTRSWEFSGVEQDEPKPNDLVSQAQHGKDVIVAIMDSGVWPESKSFSDGKMGPIPKSWNVNGICQTGTAFNASHCNRKIIGARYYLSGYESFHGPLNETQDYKSPRDKDGHGSHTASIVGGRRVHNVSAFHGVASGTASGGAPNVRLAIYKVCWAAPNQMKANGNTCFNTDILAAMDDAIADGVDVMSLSLGTAKHTSYMEDAVAIGALHALKKDIVVSASAGSFGPIPSNLANVAPWIITVGASTIDTEFYSNVVLGNGLNIEGMSMSPLKMDNEMYPLVYAGYISNENVTQYQAGQCLPNFLSPEKAKGKIVLCMRGMGEEIYTSSLEVKRAGGVGMILADIPQLGSKPYSYPHFLPATVVSYDDANTIMNYIGTCNCMHPKANILPPTTVYGSKPAPQMAEFSSRGPNTIDPYILKPDITAPGVNILAAWTEEDSPTRLPRDIDSRVVQYNLFSGTSMSCPHVSAAAALLKAVHPDWSSAAIRSALMTTATTTDSTGSLMTEEIDGSLATPFAYGAGHFRPSLAADPGLVYDANYTHYLDYLCSLGMNNTDTTFKCPSEVAPSFNLNYPSIAIPNFRGSVSVERTVTNVGGNNTVYYFYSDPPTGITITSSPNVLEFDKVGQKKNFTITVAGHGLIEVDQNGHSFGWYTWSDGVHNVRSPIALSFT 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44523204 44526297 - evm.model.ptg000007l.1348 HCH9g1348 551980

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g1348 782 MobiDBLite consensus disorder prediction 210 230 - -
HCH9g1348 782 FunFam subtilisin-like protease SBT1.5 361 507 - -
HCH9g1348 782 Pfam PA domain 391 484 IPR003137 -
HCH9g1348 782 CDD PA_subtilisin_like 367 490 - -
HCH9g1348 782 ProSiteProfiles Serine proteases, subtilase domain profile. 117 641 - -
HCH9g1348 782 Pfam Subtilase family 140 617 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH9g1348 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 777 IPR045051 -
HCH9g1348 782 Gene3D - 361 507 - -
HCH9g1348 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
HCH9g1348 782 Pfam Peptidase inhibitor I9 33 113 IPR010259 -
HCH9g1348 782 Pfam Fibronectin type-III domain 681 778 IPR041469 -
HCH9g1348 782 Gene3D Peptidase S8/S53 domain 142 654 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH9g1348 782 FunFam Subtilisin-like protease SBT1.5 142 372 - -
HCH9g1348 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
HCH9g1348 782 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
HCH9g1348 782 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
HCH9g1348 782 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
HCH9g1348 782 FunFam Subtilisin-like protease SBT5.3 22 113 - -
HCH9g1348 782 Gene3D - 658 781 - -
HCH9g1348 782 SUPERFAMILY Subtilisin-like 112 645 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH9g1348 782 CDD Peptidases_S8_3 110 603 IPR034197 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g1348 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH9g1348 HCH-Chr9:44523204 HCH9g1349 HCH-Chr9:44535517 0.00E+00 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
HCH8g0429 . 17 767 Subtilisin-like Serine Gene Family AT1G01900 58.9 1.4e-238 822.8
HCH5g0130 . 11 771 Subtilisin-like Serine Gene Family AT1G04110 69.0 0.0e+00 1078.2
HCH12g0105 . 4 773 Subtilisin-like Serine Gene Family AT1G20150 53.5 5.5e-230 794.3
HCH12g0105 . 1 513 Subtilisin-like Serine Gene Family AT1G20160 59.3 7.3e-168 587.4
HCH14g1153 . 8 839 Subtilisin-like Serine Gene Family AT1G30600 66.2 0.0e+00 1085.9
HCH12g1415 . 62 773 Subtilisin-like Serine Gene Family AT1G32940 54.7 1.4e-224 776.2
HCH6g1198 . 34 237 Subtilisin-like Serine Gene Family AT1G32940 50.9 3.5e-61 233.4
HCH12g1415 . 62 773 Subtilisin-like Serine Gene Family AT1G32950 56.0 9.7e-229 790.0
HCH6g1198 . 34 237 Subtilisin-like Serine Gene Family AT1G32950 50.4 1.9e-59 227.6
HCH12g1415 . 34 773 Subtilisin-like Serine Gene Family AT1G32960 55.0 3.1e-233 805.1
HCH6g1198 . 34 237 Subtilisin-like Serine Gene Family AT1G32960 50.4 5.4e-60 229.6
HCH7g0364 . 35 773 Subtilisin-like Serine Gene Family AT2G04160 64.8 4.0e-289 990.7
HCH6g0901 . 29 769 Subtilisin-like Serine Gene Family AT2G04160 60.6 5.8e-264 907.1
HCH6g0906 . 30 767 Subtilisin-like Serine Gene Family AT2G04160 59.3 1.9e-259 892.1
HCH3g1044 . 31 774 Subtilisin-like Serine Gene Family AT2G04160 56.7 4.9e-247 850.9
HCH6g0900 . 30 771 Subtilisin-like Serine Gene Family AT2G04160 54.9 4.8e-234 807.7
HCH8g0597 . 23 760 Subtilisin-like Serine Gene Family AT2G05920 74.4 0.0e+00 1101.3
HCH14g0343 . 24 757 Subtilisin-like Serine Gene Family AT2G05920 56.1 3.1e-230 795.0
HCH4g0597 . 33 770 Subtilisin-like Serine Gene Family AT2G05920 54.5 8.9e-217 750.4
HCH11g1168 . 28 772 Subtilisin-like Serine Gene Family AT2G05920 53.1 9.8e-216 746.9
HCH4g1519 . 33 761 Subtilisin-like Serine Gene Family AT2G05920 52.2 4.0e-209 724.9
HCH2g0544 . 31 766 Subtilisin-like Serine Gene Family AT2G05920 51.1 3.5e-205 711.8
HCH4g1548 . 22 765 Subtilisin-like Serine Gene Family AT2G05920 50.7 6.0e-197 684.5
HCH10g0224 . 40 835 Subtilisin-like Serine Gene Family AT2G19170 82.7 0.0e+00 1349.0
HCH4g1519 . 25 763 Subtilisin-like Serine Gene Family AT3G14067 65.6 4.6e-285 977.2
HCH14g0343 . 5 757 Subtilisin-like Serine Gene Family AT3G14067 53.6 3.5e-224 775.0
HCH8g0597 . 4 758 Subtilisin-like Serine Gene Family AT3G14067 53.8 1.5e-222 769.6
HCH4g0597 . 3 770 Subtilisin-like Serine Gene Family AT3G14067 50.2 2.7e-208 722.2
HCH4g1548 . 27 773 Subtilisin-like Serine Gene Family AT3G14240 77.1 0.0e+00 1182.2
HCH2g0544 . 33 774 Subtilisin-like Serine Gene Family AT3G14240 57.4 6.3e-242 833.9
HCH14g0343 . 25 753 Subtilisin-like Serine Gene Family AT3G14240 52.8 2.0e-216 749.2
HCH8g0597 . 26 754 Subtilisin-like Serine Gene Family AT3G14240 52.2 7.2e-214 740.7
HCH11g1168 . 31 771 Subtilisin-like Serine Gene Family AT3G14240 50.1 6.3e-210 727.6
HCH4g1519 . 33 759 Subtilisin-like Serine Gene Family AT3G14240 51.7 1.6e-208 723.0
HCH4g0597 . 36 766 Subtilisin-like Serine Gene Family AT3G14240 50.2 8.8e-204 707.2
HCH11g0395 . 22 566 Subtilisin-like Serine Gene Family AT4G00230 50.9 2.7e-144 509.2
HCH12g1415 . 62 773 Subtilisin-like Serine Gene Family AT4G10510 54.6 3.1e-227 785.0
HCH12g1415 . 36 773 Subtilisin-like Serine Gene Family AT4G10520 56.7 3.4e-232 801.6
HCH12g1415 . 36 773 Subtilisin-like Serine Gene Family AT4G10530 55.2 1.8e-222 769.2
HCH12g1415 . 23 773 Subtilisin-like Serine Gene Family AT4G10540 53.3 6.1e-229 790.8
HCH12g1415 . 62 773 Subtilisin-like Serine Gene Family AT4G10550 54.5 1.0e-225 780.0
HCH14g1153 . 9 839 Subtilisin-like Serine Gene Family AT4G20430 68.5 0.0e+00 1138.6
HCH3g0579 . 5 285 Subtilisin-like Serine Gene Family AT4G21320 77.0 1.6e-129 459.1
HCH12g1415 . 32 770 Subtilisin-like Serine Gene Family AT4G21630 52.0 4.4e-208 721.5
HCH12g1415 . 32 770 Subtilisin-like Serine Gene Family AT4G21650 51.7 2.7e-213 738.8
HCH2g1496 . 22 750 Subtilisin-like Serine Gene Family AT4G26330 54.8 1.8e-230 795.8
HCH10g0224 . 40 835 Subtilisin-like Serine Gene Family AT4G30020 82.7 0.0e+00 1338.2
HCH2g0544 . 10 774 Subtilisin-like Serine Gene Family AT4G34980 72.3 0.0e+00 1127.1
HCH4g1548 . 20 773 Subtilisin-like Serine Gene Family AT4G34980 53.6 5.2e-225 777.7
HCH11g1168 . 9 776 Subtilisin-like Serine Gene Family AT4G34980 51.0 1.6e-210 729.6
HCH14g0343 . 8 753 Subtilisin-like Serine Gene Family AT4G34980 51.0 2.6e-208 722.2
HCH8g0597 . 8 754 Subtilisin-like Serine Gene Family AT4G34980 51.0 1.7e-207 719.5
HCH4g1519 . 21 759 Subtilisin-like Serine Gene Family AT4G34980 50.2 1.8e-204 709.5
HCH9g0505 . 4 561 Subtilisin-like Serine Gene Family AT5G03620 59.4 3.8e-183 638.3
HCH11g0395 . 9 564 Subtilisin-like Serine Gene Family AT5G03620 56.3 6.0e-181 630.9
HCH8g0749 . 294 1053 Subtilisin-like Serine Gene Family AT5G19660 80.6 0.0e+00 1285.0
HCH14g1153 . 33 613 Subtilisin-like Serine Gene Family AT5G44530 70.7 1.3e-245 845.9
HCH9g1349 . 79 778 Subtilisin-like Serine Gene Family AT5G45640 52.3 5.6e-195 677.9
HCH9g1348 . 79 780 Subtilisin-like Serine Gene Family AT5G45640 52.0 4.0e-193 671.8
HCH2g0636 . 60 734 Subtilisin-like Serine Gene Family AT5G45640 50.1 1.4e-182 636.7
HCH14g1025 . 6 779 Subtilisin-like Serine Gene Family AT5G45650 57.8 1.1e-257 886.3
HCH9g1349 . 13 778 Subtilisin-like Serine Gene Family AT5G45650 54.1 8.4e-234 807.0
HCH9g1348 . 13 780 Subtilisin-like Serine Gene Family AT5G45650 53.8 6.0e-232 800.8
HCH2g0636 . 10 734 Subtilisin-like Serine Gene Family AT5G45650 53.0 1.9e-222 769.2
HCH11g1168 . 3 776 Subtilisin-like Serine Gene Family AT5G51750 70.9 0.0e+00 1136.7
HCH14g0343 . 20 757 Subtilisin-like Serine Gene Family AT5G51750 52.9 1.4e-228 789.6
HCH4g0597 . 12 770 Subtilisin-like Serine Gene Family AT5G51750 51.5 2.5e-222 768.8
HCH8g0597 . 23 758 Subtilisin-like Serine Gene Family AT5G51750 52.1 2.8e-221 765.4
HCH12g1571 . 35 731 Subtilisin-like Serine Gene Family AT5G59190 50.1 6.7e-187 651.0
HCH3g1044 . 21 778 Subtilisin-like Serine Gene Family AT5G59810 62.0 8.1e-274 939.9
HCH6g0901 . 4 769 Subtilisin-like Serine Gene Family AT5G59810 60.8 9.0e-265 909.8
HCH7g0364 . 19 773 Subtilisin-like Serine Gene Family AT5G59810 58.7 8.4e-263 903.3
HCH6g0906 . 16 767 Subtilisin-like Serine Gene Family AT5G59810 58.9 4.5e-256 880.9
HCH6g0900 . 26 771 Subtilisin-like Serine Gene Family AT5G59810 54.7 2.8e-226 781.9
HCH3g1060 . 12 715 Subtilisin-like Serine Gene Family AT5G59810 52.0 3.5e-216 748.4
HCH3g1058 . 18 693 Subtilisin-like Serine Gene Family AT5G59810 50.8 2.5e-206 715.7
HCH14g0343 . 22 757 Subtilisin-like Serine Gene Family AT5G67360 72.3 0.0e+00 1079.7
HCH4g0597 . 16 771 Subtilisin-like Serine Gene Family AT5G67360 65.6 3.4e-293 1004.2
HCH8g0597 . 7 759 Subtilisin-like Serine Gene Family AT5G67360 56.4 5.9e-237 817.4
HCH11g1168 . 31 772 Subtilisin-like Serine Gene Family AT5G67360 56.4 1.2e-232 803.1
HCH4g1519 . 1 760 Subtilisin-like Serine Gene Family AT5G67360 53.8 1.5e-219 759.6
HCH2g0544 . 2 769 Subtilisin-like Serine Gene Family AT5G67360 51.2 8.9e-209 723.8
HCH4g1548 . 18 768 Subtilisin-like Serine Gene Family AT5G67360 51.4 1.1e-203 706.8