Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g1348 ATGGCATCAATGATGAAGTCTATTTTCTTCGTTATTCTGCTTCTTCTGTTCCCTGTTATGGGATATTGCAAGGATCATAAACCACAACAAGAAGCTTACATTGTTTACTTTGGAGAACACAGTGGAGAGAAAGCGTTATATGAAATAGAAGCAAATCATCACTCTTATTTGCTTTCTGTTAAAGATGACAATCAAGAAGATGCCAAGTCTTCTCTTCTTTATAGCTACAAACACACCATCAATGGCTTTGCTGCTCTTCTTACGAAACAACAAGCTTCCAAACTCAAAGATATGGAAGAGGTGATATCCGTTATTCCGAATCAAGAATACAAAATGCACACAACAAGGTCATGGGAGTTTTCAGGCGTTGAACAAGATGAACCAAAACCTAATGACTTGGTTTCCCAAGCTCAACATGGAAAAGATGTCATCGTTGCCATTATGGATAGCGGTGTGTGGCCAGAATCTAAAAGTTTTAGTGATGGAAAGATGGGACCCATTCCAAAATCATGGAATGTGAATGGAATTTGTCAGACAGGAACTGCTTTTAATGCATCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTCAGTGGTTATGAGAGCTTTCACGGTCCTCTTAATGAGACACAAGACTACAAATCTCCCCGTGACAAAGATGGTCATGGATCTCACACAGCTTCAATTGTCGGTGGTCGAAGAGTCCATAATGTCTCTGCTTTTCATGGCGTTGCCAGCGGCACTGCTTCTGGTGGCGCTCCAAATGTGAGACTTGCCATATACAAAGTCTGTTGGGCAGCTCCCAATCAAATGAAAGCCAATGGAAACACTTGCTTCAACACAGACATACTGGCTGCCATGGATGATGCCATTGCTGATGGGGTTGATGTTATGAGCTTATCACTTGGAACTGCTAAGCATACCAGTTATATGGAAGATGCTGTTGCTATTGGAGCATTGCATGCCCTTAAGAAAGACATTGTAGTGTCTGCTAGTGCCGGCAGCTTTGGTCCTATTCCTTCCAATTTGGCTAATGTTGCTCCATGGATCATAACTGTTGGAGCTAGTACTATAGACACAGAATTTTACTCTAATGTTGTTCTAGGAAATGGACTGAACATCGAGGGAATGTCAATGTCTCCATTGAAGATGGACAACGAGATGTATCCATTAGTATATGCAGGTTATATTTCTAATGAAAATGTAACCCAATACCAAGCAGGACAGTGCCTTCCAAACTTTCTTTCACCTGAAAAAGCAAAGGGGAAGATAGTATTATGCATGAGAGGAATGGGAGAAGAAATATATACCAGTAGCTTGGAAGTGAAAAGGGCTGGTGGAGTTGGAATGATATTAGCAGATATCCCACAACTTGGAAGCAAGCCATATAGTTATCCTCATTTTCTTCCTGCCACGGTTGTGTCTTATGATGATGCAAACACCATCATGAATTACATTGGCACTTGCAATTGTATGCACCCAAAGGCAAACATTCTTCCGCCAACCACCGTGTATGGCTCCAAGCCGGCTCCACAAATGGCTGAGTTTTCAAGTAGAGGTCCTAATACTATTGACCCCTACATCCTCAAGCCTGACATAACAGCTCCAGGAGTTAATATATTAGCAGCATGGACTGAAGAGGATTCACCCACAAGGCTACCGCGAGATATAGATTCTCGAGTTGTTCAATACAATCTGTTTTCTGGAACCTCAATGTCTTGCCCACATGTATCTGCTGCTGCAGCCCTTCTTAAAGCCGTTCACCCTGATTGGAGTAGTGCTGCTATAAGATCTGCCCTCATGACGACCGCTACAACAACCGACTCAACGGGTTCATTGATGACCGAAGAAATAGATGGCAGCTTAGCAACTCCATTTGCATATGGGGCCGGCCACTTCCGACCCTCATTGGCAGCCGACCCTGGCCTAGTATATGATGCAAACTACACACACTACCTTGACTACCTATGTAGCCTTGGGATGAACAATACTGATACGACATTCAAGTGTCCATCAGAAGTTGCTCCTTCATTCAACCTCAATTACCCTTCAATCGCAATCCCGAATTTCAGAGGGTCGGTGAGCGTGGAAAGGACTGTTACAAATGTTGGTGGAAACAACACAGTGTATTACTTCTATAGTGACCCACCAACAGGAATTACAATAACATCTTCACCAAATGTCTTGGAATTTGATAAAGTTGGTCAGAAGAAGAACTTCACCATAACAGTCGCCGGACACGGGCTAATCGAAGTTGATCAAAACGGACACTCTTTTGGTTGGTACACTTGGAGTGATGGAGTCCACAACGTCAGAAGTCCGATTGCACTCTCATTTACTTAA 2349 42.78 MASMMKSIFFVILLLLFPVMGYCKDHKPQQEAYIVYFGEHSGEKALYEIEANHHSYLLSVKDDNQEDAKSSLLYSYKHTINGFAALLTKQQASKLKDMEEVISVIPNQEYKMHTTRSWEFSGVEQDEPKPNDLVSQAQHGKDVIVAIMDSGVWPESKSFSDGKMGPIPKSWNVNGICQTGTAFNASHCNRKIIGARYYLSGYESFHGPLNETQDYKSPRDKDGHGSHTASIVGGRRVHNVSAFHGVASGTASGGAPNVRLAIYKVCWAAPNQMKANGNTCFNTDILAAMDDAIADGVDVMSLSLGTAKHTSYMEDAVAIGALHALKKDIVVSASAGSFGPIPSNLANVAPWIITVGASTIDTEFYSNVVLGNGLNIEGMSMSPLKMDNEMYPLVYAGYISNENVTQYQAGQCLPNFLSPEKAKGKIVLCMRGMGEEIYTSSLEVKRAGGVGMILADIPQLGSKPYSYPHFLPATVVSYDDANTIMNYIGTCNCMHPKANILPPTTVYGSKPAPQMAEFSSRGPNTIDPYILKPDITAPGVNILAAWTEEDSPTRLPRDIDSRVVQYNLFSGTSMSCPHVSAAAALLKAVHPDWSSAAIRSALMTTATTTDSTGSLMTEEIDGSLATPFAYGAGHFRPSLAADPGLVYDANYTHYLDYLCSLGMNNTDTTFKCPSEVAPSFNLNYPSIAIPNFRGSVSVERTVTNVGGNNTVYYFYSDPPTGITITSSPNVLEFDKVGQKKNFTITVAGHGLIEVDQNGHSFGWYTWSDGVHNVRSPIALSFT 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44523204 44526297 - evm.model.ptg000007l.1348 HCH9g1348 551980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g1348 782 MobiDBLite consensus disorder prediction 210 230 - -
HCH9g1348 782 FunFam subtilisin-like protease SBT1.5 361 507 - -
HCH9g1348 782 Pfam PA domain 391 484 IPR003137 -
HCH9g1348 782 CDD PA_subtilisin_like 367 490 - -
HCH9g1348 782 ProSiteProfiles Serine proteases, subtilase domain profile. 117 641 - -
HCH9g1348 782 Pfam Subtilase family 140 617 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH9g1348 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 777 IPR045051 -
HCH9g1348 782 Gene3D - 361 507 - -
HCH9g1348 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
HCH9g1348 782 Pfam Peptidase inhibitor I9 33 113 IPR010259 -
HCH9g1348 782 Pfam Fibronectin type-III domain 681 778 IPR041469 -
HCH9g1348 782 Gene3D Peptidase S8/S53 domain 142 654 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH9g1348 782 FunFam Subtilisin-like protease SBT1.5 142 372 - -
HCH9g1348 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
HCH9g1348 782 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
HCH9g1348 782 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
HCH9g1348 782 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
HCH9g1348 782 FunFam Subtilisin-like protease SBT5.3 22 113 - -
HCH9g1348 782 Gene3D - 658 781 - -
HCH9g1348 782 SUPERFAMILY Subtilisin-like 112 645 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH9g1348 782 CDD Peptidases_S8_3 110 603 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH9g1348 HCH-Chr9:44523204 HCH9g1349 HCH-Chr9:44535517 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g1348 - - - 0.0