Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g1409 | ATGGAGTTTGTAGGAGACAAGAAGGAAGTAGATTCAGCCAACGATATTAACAAGCTCAATACTTCTCTTGATTCTTCTTATTCACTTTCACTCCCTGCTGAAAATACTAAAGAAGCTGAAGATTTACGTGAACGCCTTGCTCGAGATCTTAAAGATGGCCTTCATCCCCTTAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCGTATGAGGATAATATAAAAAAGCTTGTGGACTTTAGCACGGTTGAAAGTTTTTGGGTAAGTTATTGCCATTTGGCTCGTCCCGCTTCATTGCCAAGTCCTACAGATTTGCATCTTTTCAAGGAAGGGATTCGCCCACTTTGGGAGGATTCTGCTAACTGCAATGGTGGAAAATGGATAATACGCTTTAAGAAAATGGTGTCAGGCCGCTTTTGGGAAGATCTAGTTCTTGCATTAGTGGGTGACCAACTTGATTATGGAGATAACATATGTGGTGCTGTGCTTAGTACTCGTTTCAATGAGGATATTTTGAGCGTCTGGAATCGCAATGCATCTGATCATCAGGCAGTAATGGGTCTGAGAGATTCAATCAAACGCCATTTAAAGCTCCCACATGGATATGTTATGGAATACAAACCCCACGACGCTTCTCTACGTGATAACTCATCATATCGAAACACGTGGCTGCGAGGGTAA | 705 | 42.27 | MEFVGDKKEVDSANDINKLNTSLDSSYSLSLPAENTKEAEDLRERLARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKLVDFSTVESFWVSYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKMVSGRFWEDLVLALVGDQLDYGDNICGAVLSTRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 46480960 | 46492296 | - | evm.model.ptg000007l.1409 | HCH9g1409 | 552041 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g1409 | 234 | SUPERFAMILY | eIF4e-like | 33 | 230 | IPR023398 | - | |
HCH9g1409 | 234 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 35 | 222 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
HCH9g1409 | 234 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 29 | 227 | IPR023398 | - | |
HCH9g1409 | 234 | Pfam | Eukaryotic initiation factor 4E | 56 | 214 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
HCH9g1409 | 234 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 112 | 135 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
HCH9g1409 | 234 | FunFam | Eukaryotic translation initiation factor NCBP | 28 | 227 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH6g1472 | HCH-Chr6:48359840 | HCH9g1409 | HCH-Chr9:46480960 | 5.60E-25 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH9g1409 | K03259 | - | csv:101204290 | 434.106 |