Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0172 ATGCATGATTGGATTCTGGGTTACCTTAATCTCTCAAAATCTGTTGTGGTTCCTATGCCTTTCACTACATATACTTACATTGTCGACCATGCCAATGTTCAACACATTCTGAAGACCAACTTTGCTAATTATCTTAAGGGATTAGTATATCATTCGTACATGGAAGTGCTTCTTGGAGATAGGATATTCAACGTAGATGGAGAGTTGTGGAGGAAACAAAGGAAAACTGTGAGCTTTGAATTTGCATCGAAGAATTTGAGGGATTTCAGTACAATAGTTTTCAGAGAGTAG 291 37.46 MHDWILGYLNLSKSVVVPMPFTTYTYIVDHANVQHILKTNFANYLKGLVYHSYMEVLLGDRIFNVDGELWRKQRKTVSFEFASKNLRDFSTIVFRE 96
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29194504 29194933 - Hsped.01g01720.1 Hepe01g0172 559282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0172 96 PANTHER CYTOCHROME P450 1 96 - -
Hepe01g0172 96 SUPERFAMILY Cytochrome P450 14 94 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0172 96 Gene3D Cytochrome P450 2 96 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0172 Hepe-Chr1:29194504 HepeContig68g0005 Hepe-ChrContig68:438426 3.73e-58 dispersed
Hepe01g0172 Hepe-Chr1:29194504 Hepe02g1708 Hepe-Chr2:23283658 1.59e-13 wgd
Hepe01g0172 Hepe-Chr1:29194504 Hepe03g0561 Hepe-Chr3:10977193 4.58e-14 wgd
Hepe01g0172 Hepe-Chr1:29194504 Hepe08g1776 Hepe-Chr8:35653496 3.73e-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0172 K20495 - csv:101222076 178.333