Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0177 ATGAAAATGGCAATGCCACAAGTAGTAGTAGTTGTTGCTTTGACGTTTTTGCTTTTGGGTATTGCATCTGATGCCCAACTTTCCTCTACATTTTACGATCAAACATGTCCCACTGCACTCACTACCATTAGAACTGTGATTAGGCAAGCAGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTTATTCGTCTCCATTTCCACGACTGCTTCGTTCAAGGCTGTGATGCATCTATATTGCTGGACGATACTCCTTCTATGATTGGCGAACAAAATGCAGCGCCCAATCGAAACTCTGCTAGAGGCTATGGTGTGATACACAAGGCTAAAATTGAAGTTGAGAAGATATGTCCAGGCGTCGTATCGTGTGCAGATATTCTTTCTGTGGCTGCAAGAGATGCTTCTTTTTCTGTTGGTGGTCCATCTTGGACGGTAAGACTTGGACGAAGAGACTCTATCACTGCAAGTAAAACTCTAGCAGAGAGTGAGCTTCCACATTTCCAAGAAGGTCTTGATAGACTTATTTCCATTTTTGAAAATAAAGGTCTTAATACAAGAGATATGGTCGCCCTATCAGGTTCTCATACTATAGGACAAGCCCAATGTTTTCTTTTCCGCAATAGAATATACAACCAAAGTAATATTGATGCAGGATTTGGTAGCACTCGTCGTAGAAATTGTCCAACATCTGGTGGGAATAACAATTTGGCTCCACTTGATTTGGTCACACCTAATTCCTTTGACAATAATTACTTCAAAAATCTTATTCAAAAGAAGGGTTTGCTAGAAACAGACCAAGTCCTCTTTAATGGAGGATCGACAGACAATATTGTCACAGAGTACAGTAGAAATCCGACCATATTCAAATCTGACTTTGCAGCTGCAATGATTAAAATGGGAGACATCCAACCTCTCACTGGTTTGGAAGGCCAAATAAGAAATATATGTGGTGTTGTCAACTAA 960 40.62 MKMAMPQVVVVVALTFLLLGIASDAQLSSTFYDQTCPTALTTIRTVIRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNRNSARGYGVIHKAKIEVEKICPGVVSCADILSVAARDASFSVGGPSWTVRLGRRDSITASKTLAESELPHFQEGLDRLISIFENKGLNTRDMVALSGSHTIGQAQCFLFRNRIYNQSNIDAGFGSTRRRNCPTSGGNNNLAPLDLVTPNSFDNNYFKNLIQKKGLLETDQVLFNGGSTDNIVTEYSRNPTIFKSDFAAAMIKMGDIQPLTGLEGQIRNICGVVN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29437069 29438732 + Hsped.01g01770.1 Hepe01g0177 559287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0177 319 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
Hepe01g0177 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 FunFam Peroxidase 30 176 - -
Hepe01g0177 319 Gene3D - 30 315 - -
Hepe01g0177 319 Pfam Peroxidase 43 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 Gene3D Peroxidase, domain 2 164 298 - -
Hepe01g0177 319 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 SUPERFAMILY Heme-dependent peroxidases 26 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0177 319 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe01g0177 319 FunFam Peroxidase 164 298 - -
Hepe01g0177 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Hepe01g0177 319 PANTHER PEROXIDASE 72-RELATED 12 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0177 Hepe-Chr1:29437069 Hepe01g0185 Hepe-Chr1:30392305 1.01e-208 dispersed
Hepe01g0177 Hepe-Chr1:29437069 Hepe01g0178 Hepe-Chr1:29443129 8.04e-195 tandem
Hepe01g0177 Hepe-Chr1:29437069 Hepe03g1083 Hepe-Chr3:61007049 1.07e-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0177 K00430 - csv:116403994 568.54