Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g0178 | ATGACAATGTCTCGAGTAGTTGTTGTTGCGTTGATGATCTTGCTTTTGGGTATGGCTTGCAATGCCCAACTTTCCTCTACATTTTACGATAAAACTTGTCCCACCGCCCTCAATACTATCCGAACTGTTATTAGGCAAGCCGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTCATTCGCCTCCATTTCCATGATTGTTTCGTTCAAGGTTGTGATGCGTCGATATTGCTTGATGATACTCCCTCTATTATCGGCGAACAAAATGCAGCACCGAATCGAAACTCCGCAAGAGGTTATGGAGTGATACACAAGGCTAAGACTGAAGTTGAGAAGATATGTCCTGGTGTCGTATCTTGTGCAGACATTCTCGCTACGGCCGCAAGAGATGCGTCTTTTTCGGTTGGTGGTCCATCTTGGACAGTAAAGCTTGGAAGAAGAGACTCTACCACTGCAAGCAAAACCCTAGCAGAGAGCGAGCTTCCCCACTTCCAAGAAAGTCTTGATAGACTTATCTCCATTTTTTCAAATAAAGGTCTTAATGCAAGAGATATGGTTGCACTATCAGGTTCTCACACCATAGGACAAGCTCAATGCTTTCTTTTCCGCAATAGAATATACAACCAAAGTAATATTGAGGCAGGATTTGGTAGCACTCGTCGTAGAAATTGTCCGACATCTGGTGGGAATGGAAATTTGGCAGCACTTGATTTAGTCACACCCAATTCCTTTGACAATAACTATTTCAAAAATCTTATTCAAAGAAAAGGATTGCTTGAAACAGATCAAGTCCTCTTTAATGGAGGATCCACGGATAGTATTGTCACAAAGTATAGTAATAATCCATCCACATTCAAATCCGACTTTGCAACTGCAATGATTAAAATGGGAGACATTCAACCGCTCACGGTTCTTGAACTTCTGCTTTGTTATGTTGTGTTCAAGGTGAGAATGGTGGTTGATGAAGATCTTGAAGGGTTTGGCTTCAGTGGAAAGAATGAAGTGATAAATGGAAAAGCAGCAGTGATTGGCTTCTTGTTGTTGTTGGATTTTGATCTCCTAACTGGTAAGGGTCTTCTCAAGGGAACTGGCTTCTTGGACTTCATTTATTCTGCTTCAGATGCTTTCAAATAG | 1131 | 41.82 | MTMSRVVVVALMILLLGMACNAQLSSTFYDKTCPTALNTIRTVIRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSIIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILATAARDASFSVGGPSWTVKLGRRDSTTASKTLAESELPHFQESLDRLISIFSNKGLNARDMVALSGSHTIGQAQCFLFRNRIYNQSNIEAGFGSTRRRNCPTSGGNGNLAALDLVTPNSFDNNYFKNLIQRKGLLETDQVLFNGGSTDSIVTKYSNNPSTFKSDFATAMIKMGDIQPLTVLELLLCYVVFKVRMVVDEDLEGFGFSGKNEVINGKAAVIGFLLLLDFDLLTGKGLLKGTGFLDFIYSASDAFK | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 29443129 | 29446157 | + | Hsped.01g01780.1 | Hepe01g0178 | 559288 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g0178 | 376 | CDD | secretory_peroxidase | 23 | 302 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Hepe01g0178 | 376 | FunFam | Peroxidase | 27 | 176 | - | - | |
Hepe01g0178 | 376 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | - | - | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 234 | 249 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 290 | 303 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 182 | 194 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Plant peroxidase signature | 250 | 267 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 183 | 193 | IPR019793 | - | |
Hepe01g0178 | 376 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 331 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | SUPERFAMILY | Chlorophyll a-b binding protein | 318 | 360 | - | - | |
Hepe01g0178 | 376 | Gene3D | Peroxidase, domain 2 | 161 | 295 | - | - | |
Hepe01g0178 | 376 | Gene3D | - | 27 | 302 | - | - | |
Hepe01g0178 | 376 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 302 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Haem peroxidase superfamily signature | 183 | 198 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Haem peroxidase superfamily signature | 236 | 251 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | FunFam | Peroxidase | 161 | 295 | - | - | |
Hepe01g0178 | 376 | Pfam | Peroxidase | 40 | 280 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Hepe01g0178 | 376 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601(InterPro) | |
Hepe01g0178 | 376 | PANTHER | PEROXIDASE 72-RELATED | 11 | 303 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0178 | Hepe-Chr1:29443129 | Hepe02g3288 | Hepe-Chr2:82486076 | 4.55e-121 | dispersed | |
Hepe04g0055 | Hepe-Chr4:21658232 | Hepe01g0178 | Hepe-Chr1:29443129 | 1.18e-24 | dispersed | |
Hepe09g1017 | Hepe-Chr9:10506637 | Hepe01g0178 | Hepe-Chr1:29443129 | 1.75e-33 | dispersed | |
Hepe01g0178 | Hepe-Chr1:29443129 | Hepe01g0185 | Hepe-Chr1:30392305 | 2.49e-210 | proximal | |
Hepe01g0177 | Hepe-Chr1:29437069 | Hepe01g0178 | Hepe-Chr1:29443129 | 8.04e-195 | tandem | |
Hepe01g0178 | Hepe-Chr1:29443129 | Hepe10g0859 | Hepe-Chr10:20071105 | 2.89e-12 | wgd | |
Hepe01g0178 | Hepe-Chr1:29443129 | Hepe06g0379 | Hepe-Chr6:14277534 | 1.26e-32 | wgd | |
Hepe01g0178 | Hepe-Chr1:29443129 | Hepe08g1795 | Hepe-Chr8:38911502 | 1.19e-34 | wgd | |
Hepe01g0178 | Hepe-Chr1:29443129 | HepeContig65g0003 | Hepe-ChrContig65:19462 | 3.38e-23 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g0178 | K00430 | - | csv:116403992 | 532.332 |