Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0185 ATGACAATGTCTCGAGTAGTTGTTGTTGCGTTGATGATCTTGCTTTTGGGTATCGCTTGCAATGCCCAACTTTCCTCTACATTTTACGATAAAACTTGTCCCACTGCCCTCAATACCATCCGAACTGTTATTAGGCAAGCCGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTCATTCGCCTCCATTTCCATGATTGTTTCGTTCAAGGTTGTGATGCGTCGATATTGCTTGATGATACTCCCTCTATGATCGGCGAACAAAATGCCGCACCGAATCGAAACTCTGCAAGAGGTTATGGAGTGATACACAAGGCTAAGACTGAAGTTGAGAAGATATGTCCTGGTGTCGTATCTTGTGCAGACATTCTCGCTACGGCCGCAAGAGATGCGTCTTTTTCGGTTGGTGGTCCATCTTGGACAGTAAAGCTAGGAAGAAGAGACTCTACCACTGCAAGCAAAACCCTAGCAGAGAGCGAGCTTCCGCACTTCCAAGAAAGCCTTGATAGACTTATTTCCATTTTTTCAAATAAAGGTCTTAATGCAAGAGATATGGTTGCACTATCAGGTGCTCACACCATAGGACAAGCTCAATGCTTTCTTTTCCGCAATAGAATATACAACCAAAGTAATATTGATGCAGGATTTGGTAGCACTCGTCGTAGAAATTGTCCAACATCTGGTGGGAATAACAATTTGGCTCCTCTTGATTTGGTCACACCTAATTCCTTTGACAATAATTACTTCAAAAATCTTATTCAAAGAAAAGGATTGCTTGAAACAGATCAAGTCCTCTTTAATGGAGGATCCACGGATAGTATTGTCACAGATTATAGTAATAATCCATCCACATTCAAATCCGACTTTGCAACTGCAATGATTAAAATGGGAGACATTCAACCACTCACTGCTTTAGAAGGCCAAATAAGAAATATATGTGGAGTTGTCAACTAA 951 41.54 MTMSRVVVVALMILLLGIACNAQLSSTFYDKTCPTALNTIRTVIRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILATAARDASFSVGGPSWTVKLGRRDSTTASKTLAESELPHFQESLDRLISIFSNKGLNARDMVALSGAHTIGQAQCFLFRNRIYNQSNIDAGFGSTRRRNCPTSGGNNNLAPLDLVTPNSFDNNYFKNLIQRKGLLETDQVLFNGGSTDSIVTDYSNNPSTFKSDFATAMIKMGDIQPLTALEGQIRNICGVVN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30392305 30393983 + Hsped.01g01850.1 Hepe01g0185 559295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0185 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Hepe01g0185 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Hepe01g0185 316 FunFam Peroxidase 27 176 - -
Hepe01g0185 316 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 Pfam Peroxidase 40 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 FunFam Peroxidase 161 295 - -
Hepe01g0185 316 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 Gene3D Peroxidase, domain 2 161 295 - -
Hepe01g0185 316 PANTHER PEROXIDASE 72-RELATED 11 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g0185 316 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Hepe01g0185 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe01g0185 316 Gene3D - 27 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0177 Hepe-Chr1:29437069 Hepe01g0185 Hepe-Chr1:30392305 1.01e-208 dispersed
Hepe01g0185 Hepe-Chr1:30392305 Hepe02g3288 Hepe-Chr2:82486076 2.15e-128 dispersed
Hepe10g1840 Hepe-Chr10:55130923 Hepe01g0185 Hepe-Chr1:30392305 1.45e-49 dispersed
Hepe01g0178 Hepe-Chr1:29443129 Hepe01g0185 Hepe-Chr1:30392305 2.49e-210 proximal
Hepe01g0185 Hepe-Chr1:30392305 Hepe01g0321 Hepe-Chr1:47579624 3.76e-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0185 K00430 - csv:116403994 557.755