Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0190 ATGGCTGCTCTTCACACCTTCTTCTTCCTCTCAATCCTTCTTCCCATCTCCTTCTTCCTCCAATTCCATCTCTCCCTTTCTCAAAACCCCACAATTTGTAATCCCGACGATTCCAAGGCCTTCCACGACTTCCACCGCGCTTTCCATTCCCAAATCGACGGATTGCACACGAACTGTTCGACGAATTGCTGCACTTGCATTGGCCTCACTTGCGACTCTTCTGGAAGGCTTGTTAAGATCGAGCTTCCATGGAGAAAGCTATTTGGTCAATTACCAAACTCAATTGCCAGATTCCAAAATCTCAGAGTTCTCAATTTGTCCTCCAATTCCCTCACTGGGTTTGTTCCTGTTGCTCTGCTTCAGCTCCCTTTCTTGGAAGTTCTTGATCTCAGCTCCAATGACTTCTCTGGGAGCTTCTCTTCAGGTACCATTAACTTGCCTTCCATTCGGGTTCTTATTGTTTCTCATAATTTATTCAAGGGTGTTCTTCCACTTGGGATTTGTGTTAACTCCTCTAGAATTGAGATTCTCAATCTGGGTTTCAATAGTTTCTTTGGTGTGTTTCCTGTTGAGCTTGCTGAATGTGTTTCCTTGAAGAGACTGTTTGTGGAATCGAATTTTATCAGTGGTGGGATTCCTGATGAGGCTTCTGGATTGAGGGAATTGACCCATTTTTCTGCTCAGAATAACAAGCTTTCTGGTTCTTTGAATGGTGTTGTTGGGAATCTCACTAGCCTTGTTCGGTTGGATTTGTCATCTAATGGGTTTTTTGGAGAAATTCCTGATGTTTTTTACAACTCTGTGAATTTGAGTGAGTTTGTTGCTGAGTCTAACAGGTTTAGTGGGAAGATTCCCAATTCTTTGTCAAACTCTGCTTCACTGACTGTTCTCAATTTGAGGAACAATTCAATTGAGGGAATTCTTGATCTTAACTGCTCAGCAATGTCAAGTTTGGTTACTCTTGACTTAGGCACTAATAGGTTTCATGGCTCTATACCTAGTAATCTTCCCTTTTGTACCCAACTGAGAAGTATTAACCTTGCTAGGAACAACCTTGGCGGTCAGATCCCCGAAAGCTTTAGGAATTTTCAGAGCCTCTCGTATTTGTCGCTTACGAATACGAGCATCGTTAACGTTTCGTCTGCCCTTAATGTCTTGCAACATTGCCAGAATTTGAGTACTGTGGTTCTTACCTTTAACTTCCATGGGGAAGTGTTGGGAGATGATCCTAACTTGCATTTCAAGAGCCTCCAAGTTTTGATAATTGCGAATTGTGGACTGAAGGGAATAATACCCCGGTGGTTGAGAGGTTCAACGGAGTTGCAGTTCTTGGATTTGTCTTGGAACCATCTTGAAGGAACTATTCCGTCGTGGTTTGGCGAGTTTAGGTCATTGTTTTACTTGGATTTATCTAATAATTCGTTCACCGGAGATATCCCGAAAGAGATGACTGAAATGAAGAGTTTCATTGATAGAAACTACTCGCTCGATGAACCTTCCTCACCCGATTTTTCCCTTTTCCTGAAAAGAAATGGAACTGGTTTGCAGTACAATCAAGTATTGAGATTCCCACCCACTTTGAACCTCAGTATCAACAAACTCAGCGGGCCAATCTGGCCAGAGTTTGGAAATTTTAAGGAGATTCTAGTCCTTGATCTGAAAATCAACAATTTGTCAGGATCGATTCCGAGCAGTCTCTCTGGGATGGTTAGCTTAGAGACTCTGGATCTTTCTCACAACAATCTTTCAGGAACAATTCCACCTTCACTACAAAAGCTCAATTTTTTGTCTAAGTTCAGTGTTGCATACAATCAATTACATGGGACGATTCCTGAAGGAGGTCAATTTCATAGCTTTGAAAACGGTAGCTTTGAAGGAAACAATTTTTGCTTCCGAGACGATTTCTGTGCATCAATTGACAGAGATCCTCTTATGCCATCCCACAAATCAAGAATGGCTACAGGGACTCTTATAGGTATGGTTTTCGGTATTGTGTTCGGAATCATGTTTCTTGTAACTCTCTTGGTTATGTTTATGCTTCGGGCACCTCAGGGAAGAGTTGGTGATCCCGAAAACGAACTATCCAACACTGACGATAATGACTTGGAGGAAGTCAAGGCAGGATTGGTAGTTTTGTTCCAAAACACTAACAATGGAAGTCTCTCGCTGGAGGACATTTTGAAATCGACTAATAACTTTGATCAAGAAAATATCATTGGGTGTGGGGGTTTTGGTTTAGTTTACAAGGCCACCCTTCCTGATGGTAGAAAGGTCGCTATAAAACGGTTGTCTGGTGATTGTGGTCAAATGGAAAGAGAATTTCGAGCAGAAATCGAAACGCTTTCTGGCGCTCAGCATCCAAATCTTGTTCTTCTTCAGGGGTATTGTATGTATAAAAATGACAGGCTTTTGATTTATTCTTTCATGGAGAATGGTAGCTTAGATTACTGGTTACATGAAAAACCTGATGGCCCGGCTTGCCTCGACTGGGATACCAGACTGCAGATTGCTCGGGGGGCTGCCGTGGGGCTGGCTTATTTACATCAATCCTGTGAACCCCATATCCTCCACCGAGATATCAAGTCGAGTAACATTCTTTTAGACAAAAGTTTCAAAGCTCACTTAGCTGATTTCGGTCTTGCCAGGCTCATTCTTCCCTATGATTCTCATGTAACAACCGATCTTGTTGGTACATTGGGCTACATTCCACCTGAGTACGGACAATCCCCGGTGGCAACGTACAAAGGAGATGTGTACAGTTTTGGAGTTGTTCTATTAGAGCTTTTGACTGGCAAAAGGCCAATCGATATGTGCAGATCGAAAGGACTTCGAGACTTGATCTCTTGGGTGTTCCAAATGAAGAAAGACAGAAAAGAAAGCGAGGTGTTCGATCCATTGATATACGAGAAGCAGCACGAGACAGCGATGACTGAAGTTCTCGATATAGCATGCCTTTGCGTATGTATGGTACCTAAAGAGAGGCCTTCAACTCAACAGCTAGTTTCTTTGCTTGATAAAGTAAGTTAA 3027 42.45 MAALHTFFFLSILLPISFFLQFHLSLSQNPTICNPDDSKAFHDFHRAFHSQIDGLHTNCSTNCCTCIGLTCDSSGRLVKIELPWRKLFGQLPNSIARFQNLRVLNLSSNSLTGFVPVALLQLPFLEVLDLSSNDFSGSFSSGTINLPSIRVLIVSHNLFKGVLPLGICVNSSRIEILNLGFNSFFGVFPVELAECVSLKRLFVESNFISGGIPDEASGLRELTHFSAQNNKLSGSLNGVVGNLTSLVRLDLSSNGFFGEIPDVFYNSVNLSEFVAESNRFSGKIPNSLSNSASLTVLNLRNNSIEGILDLNCSAMSSLVTLDLGTNRFHGSIPSNLPFCTQLRSINLARNNLGGQIPESFRNFQSLSYLSLTNTSIVNVSSALNVLQHCQNLSTVVLTFNFHGEVLGDDPNLHFKSLQVLIIANCGLKGIIPRWLRGSTELQFLDLSWNHLEGTIPSWFGEFRSLFYLDLSNNSFTGDIPKEMTEMKSFIDRNYSLDEPSSPDFSLFLKRNGTGLQYNQVLRFPPTLNLSINKLSGPIWPEFGNFKEILVLDLKINNLSGSIPSSLSGMVSLETLDLSHNNLSGTIPPSLQKLNFLSKFSVAYNQLHGTIPEGGQFHSFENGSFEGNNFCFRDDFCASIDRDPLMPSHKSRMATGTLIGMVFGIVFGIMFLVTLLVMFMLRAPQGRVGDPENELSNTDDNDLEEVKAGLVVLFQNTNNGSLSLEDILKSTNNFDQENIIGCGGFGLVYKATLPDGRKVAIKRLSGDCGQMEREFRAEIETLSGAQHPNLVLLQGYCMYKNDRLLIYSFMENGSLDYWLHEKPDGPACLDWDTRLQIARGAAVGLAYLHQSCEPHILHRDIKSSNILLDKSFKAHLADFGLARLILPYDSHVTTDLVGTLGYIPPEYGQSPVATYKGDVYSFGVVLLELLTGKRPIDMCRSKGLRDLISWVFQMKKDRKESEVFDPLIYEKQHETAMTEVLDIACLCVCMVPKERPSTQQLVSLLDKVS 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30929819 30933131 + Hsped.01g01900.1 Hepe01g0190 559300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0190 1008 SUPERFAMILY L domain-like 386 630 - -
Hepe01g0190 1008 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 Pfam Leucine Rich Repeat 341 363 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 Pfam Leucine Rich Repeat 464 483 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 Pfam Leucine Rich Repeat 441 461 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 Pfam Leucine Rich Repeat 571 593 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 SMART LRR_typ_2 146 170 IPR003591 -
Hepe01g0190 1008 SMART LRR_typ_2 122 141 IPR003591 -
Hepe01g0190 1008 SMART LRR_typ_2 315 339 IPR003591 -
Hepe01g0190 1008 SMART LRR_typ_2 569 592 IPR003591 -
Hepe01g0190 1008 SMART LRR_typ_2 98 121 IPR003591 -
Hepe01g0190 1008 SMART LRR_typ_2 243 266 IPR003591 -
Hepe01g0190 1008 PANTHER LEUCINE RICH REPEAT KINASE 2 384 1006 IPR051420 -
Hepe01g0190 1008 Gene3D Phosphorylase Kinase; domain 1 695 808 - -
Hepe01g0190 1008 ProSiteProfiles Protein kinase domain profile. 733 1008 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0190 1008 FunFam Leucine-rich repeat receptor protein kinase MSP1 695 808 - -
Hepe01g0190 1008 FunFam Tyrosine-sulfated glycopeptide receptor 1 312 640 - -
Hepe01g0190 1008 SMART serkin_6 733 1008 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0190 1008 ProSiteProfiles Leucine-rich repeat profile. 571 594 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 ProSiteProfiles Leucine-rich repeat profile. 100 121 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 SUPERFAMILY Protein kinase-like (PK-like) 717 1004 IPR011009 -
Hepe01g0190 1008 Gene3D Ribonuclease Inhibitor 35 309 IPR032675 -
Hepe01g0190 1008 Gene3D Transferase(Phosphotransferase) domain 1 809 1008 - -
Hepe01g0190 1008 ProSitePatterns Protein kinases ATP-binding region signature. 739 761 IPR017441 GO:0005524(InterPro)
Hepe01g0190 1008 PRINTS Leucine-rich repeat signature 441 454 - -
Hepe01g0190 1008 PRINTS Leucine-rich repeat signature 569 582 - -
Hepe01g0190 1008 Pfam Leucine rich repeat 96 135 IPR001611 GO:0005515(InterPro)
Hepe01g0190 1008 Gene3D Ribonuclease Inhibitor 310 633 IPR032675 -
Hepe01g0190 1008 Pfam Protein kinase domain 734 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0190 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g0190 1008 SUPERFAMILY RNI-like 76 400 - -
Hepe01g0190 1008 FunFam Leucine-rich repeat receptor protein kinase EMS1 188 286 - -
Hepe01g0190 1008 FunFam Leucine-rich repeat receptor-like protein kinase 809 1008 - -
Hepe01g0190 1008 ProSiteProfiles Leucine-rich repeat profile. 293 314 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0190 Hepe-Chr1:30929819 Hepe03g1689 Hepe-Chr3:73713346 3.37e-140 dispersed
Hepe09g0579 Hepe-Chr9:5393455 Hepe01g0190 Hepe-Chr1:30929819 5.26e-55 dispersed
Hepe02g2566 Hepe-Chr2:72612653 Hepe01g0190 Hepe-Chr1:30929819 2.80e-38 transposed
Hepe02g2807 Hepe-Chr2:77133293 Hepe01g0190 Hepe-Chr1:30929819 7.78e-73 transposed
Hepe01g0190 Hepe-Chr1:30929819 Hepe04g0325 Hepe-Chr4:49899240 3.41e-41 wgd
Hepe01g0190 Hepe-Chr1:30929819 Hepe04g0285 Hepe-Chr4:48007645 3.73e-41 wgd
Hepe01g0190 Hepe-Chr1:30929819 Hepe07g0984 Hepe-Chr7:13399979 2.89e-61 wgd
Hepe01g0190 Hepe-Chr1:30929819 Hepe07g1016 Hepe-Chr7:14323610 8.03e-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72439 PF00069 Pkinase 2.00E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0190 K27625 - csv:116404121 1636.7