Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0214 ATGGATGAATCTAGGAGGGTTGGTATAATCGGAAAGATAATTGTTCACTCTCCACCTTACAATTTAGATCAACAAGCCATAGGGCGATCCAACAAGATCAACAAGCCAGAGGTCGATCGATCATCCAAGGAGATCAACAAGTCAAAGGTCGATCCAATAAGATCAACAAGCCAAAAGCCGATCATCCAAACTAGGGCGATCCAACAAGATCAACAAGCCATAGGGCGATCCAACAAGATCAACAAGCCAGAGGTCGATCGATCATCCAAGGAGATCAACAAGTCAAAGGTCGGTCCAATAAGATCAACAAGCCAAAAGTCGATCATCCAAGCAGATCAAAAAGCCCAAGCCGATCATCCAAGCAGATCAAAAAGCCCAGCCAGAGGTCGATCGATCATCCAAGGAGATCACCAAGTCAAAGATCAACAAGCCAAAAGTCGATCATCCAAGCAGATCAAAAAGCTCAAGGCATGTCGATCGATCATCCAAGCAGATCAAAAAGCCCAGAGCAGGTCGATCGATCATCCAAGGAGATCAACAACGGTGCATCAGATCGAAATCAGATCAACCTCATGTGTAGACCAACGACGACTTGAACAACGACGTCGACATCTTCCCCAGCGGCTACCTTCTTCTTTAGACGCCGCCGCCGCCTGTAACCCCTCTCTCTCAGACGCCGCCGCCGCCGACTGGTTTCTCTCTGGTTTTAACTTCACAAAGTACCAAATAAGACATCCGCAACTTGTTTGCACAAGGACAGCCAAGATGTCGCGGAAGGGTTTGATGGAACAGGACTTAAAGAAATTGGATGTGACGAAGCTCCATCCACTTTCTCCAGAAGTTATATCTCGTCAAGCTACCATTAATATTGGTACTATTGGTCATGTGGCACATGGGAAATCTACAGTGGTAAAAGCAATTTCAGGAGTCCAGACTGTACGTTTTAAGAACGAGCTGGAGCGTAACATTACCATTAAGCTGGGGTATGCTAATGCAAAGATATACAAATGTGAAGATGACAAGTGCCCTCGGCCTATGTCCTACAAGGCATATGGAAGTGGAAAGGAAGACACTCCTTTATGTGACGTGCCTGGGTTTGAAAATTGCAGGATGAAACTATTGCGACACGTATCCTTTGTCGACTGCCCGGGGCACGATATTCTTATGGCTACCATGCTTAACGGAGCAGCCATTATGGATGGAGCGTTACTTCTGATAGCTGCCAATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCACCTTGCTGCTGTTGAAATTATGCGCCTTCAACATATTATAATCCTCCAGAATAAAGTTGATCTTATACAGGAAAATGTAGCAATCAATCAACATGAAGCAATTCAAAAATTTATTCAGGGAACTGTTGCCGATGGTGCACCAGTAGTACCGATTTCTGCTCAGCTGAAGTATAATATTGATGTTGTTTGCGAGTATATAGTGAAAAAGATTCCAATTCCTGAAAGGAATTTTGTCTCACCTCCTAATATGATCGTGATTCGTTCTTTTGATGTTAACAAACCTGGATTTGAAGTTGATGAGATCAAAGGTGGTGTGGCTGGGGGTAGCATATTACGGGGTGTTTTAAAGGTGAATCAGTTTATTGAAGTTCGTCCGGGGATTGTTGTTAAGGATGAAAGTGGTAACATCAAGTGCACCCCAATATACTCGAGGATTGTTTCTTTGTATGCGGAGCAAAATGAGCTGCAATTTGCAGTCCCTGGAGGTCTCATTGGGGTTGGTACAACCATGGATCCCACTTTGACTCGTGCTGACAGATTGGTCGGTCAGGTTCTCGGAGAAGTTGGATCACTTCCTGATATTTTTGTTGAGTTAGAGGTAAACTTTTTCCTTTTGCGGCGACTCCTAGGTGTGAGGACAAAAGGATCAGAAAGGCAGGGAAAAGTATCAAAACTGGCGAAGGGGGAGATTCTAATGTTGAACATAGGATCAATGTCAACGGGAGCTAGAGTACTTGCAGTAAAGAACGATTTAGCAAAGTTGCAGCTTACTTCTCCTGTTTGCACCAGCAAGGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATAGGCTGGGGTCAAATTCAAGCTGGAACTACTCTTGATGTCCCTCCCTGCCCCATCTGA 2160 44.86 MDESRRVGIIGKIIVHSPPYNLDQQAIGRSNKINKPEVDRSSKEINKSKVDPIRSTSQKPIIQTRAIQQDQQAIGRSNKINKPEVDRSSKEINKSKVGPIRSTSQKSIIQADQKAQADHPSRSKSPARGRSIIQGDHQVKDQQAKSRSSKQIKKLKACRSIIQADQKAQSRSIDHPRRSTTVHQIEIRSTSCVDQRRLEQRRRHLPQRLPSSLDAAAACNPSLSDAAAADWFLSGFNFTKYQIRHPQLVCTRTAKMSRKGLMEQDLKKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKCPRPMSYKAYGSGKEDTPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDIFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPPCPI 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33019288 33030325 + Hsped.01g02140.1 Hepe01g0214 559324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0214 719 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 610 707 IPR009001 -
Hepe01g0214 719 CDD eIF2_gamma 288 495 IPR044128 GO:0005525(InterPro)
Hepe01g0214 719 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 285 494 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe01g0214 719 MobiDBLite consensus disorder prediction 95 116 - -
Hepe01g0214 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 278 497 IPR027417 -
Hepe01g0214 719 CDD eIF2_gamma_III 612 706 IPR015256 -
Hepe01g0214 719 Gene3D Translation factors 497 611 - -
Hepe01g0214 719 Pfam Elongation factor Tu GTP binding domain 287 491 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe01g0214 719 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 259 714 IPR050543 GO:0000049(PANTHER)|GO:0001731(PANTHER)|GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005850(PANTHER)
Hepe01g0214 719 Pfam Elongation factor Tu domain 2 523 605 IPR004161 GO:0005525(InterPro)
Hepe01g0214 719 MobiDBLite consensus disorder prediction 51 78 - -
Hepe01g0214 719 Gene3D Translation factors 612 711 - -
Hepe01g0214 719 PRINTS GTP-binding elongation factor signature 289 302 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe01g0214 719 PRINTS GTP-binding elongation factor signature 432 441 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe01g0214 719 PRINTS GTP-binding elongation factor signature 378 388 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe01g0214 719 PRINTS GTP-binding elongation factor signature 394 405 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Hepe01g0214 719 CDD eIF2_gamma_II 496 609 IPR044127 GO:0000049(InterPro)
Hepe01g0214 719 Pfam Initiation factor eIF2 gamma, C terminal 617 706 IPR015256 -
Hepe01g0214 719 MobiDBLite consensus disorder prediction 20 154 - -
Hepe01g0214 719 FunFam Eukaryotic translation initiation factor 2 subunit gamma 285 495 - -
Hepe01g0214 719 Gene3D - 285 495 IPR027417 -
Hepe01g0214 719 FunFam Eukaryotic translation initiation factor 2 subunit gamma 612 711 - -
Hepe01g0214 719 FunFam Eukaryotic translation initiation factor 2 subunit gamma 496 611 - -
Hepe01g0214 719 MobiDBLite consensus disorder prediction 80 94 - -
Hepe01g0214 719 SUPERFAMILY Translation proteins 495 609 IPR009000 -
Hepe01g0214 719 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0214 Hepe-Chr1:33019288 Hepe03g1972 Hepe-Chr3:76898951 1.86e-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0214 K03242 - csv:116403970 904.82