Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0227 ATGGGCAACCACGGAGGAGCAGAAGCTTGGAGTTTCATCAAACAAGTTGTAGCAGGACGATGGTTTATGGTATTCGCCTCGTTTTTAATCATGATTGGCAACGGTTCAACTTACATATTCGGAACATACTCGAAAGTGATCAAGACTGAATTTGATTATAGTCAAACCCAAGTTAACACCTTGGGATTTGCCAAAGATCTCGGCTCGAACTTTGGGATTTTCGCAGGGCTTTTAGACGAGGTGGCTCCACGGTGGGCTCTATTGATGTGCGGTGCATTTTTAAACTTCATCAGTTATTTCATGATTTGGCTATCCATAACTCGTCGTATTGCCAAACCCCAATTTTGGCAAATGTTCCTTTACATTTGCTTGGGTACTAATTCAGCAAATTTCTCCAACACCGCTGTTATGGTCACTAACGTTGGAAACTTTCCTGATCGACGAGGCATTATTTTGGGGCTTCTTAAAGGATTTGTTGGCATTGGAGGTGCCATTATAACCCAATTGTATTTAGCCTTTTACGGCCACGATGACCCATCTAATCTTGTTCTTCTTTATTCTTGGCTTCCCACTATCGTAATTCTGCTCGTTTTCATCACAATCAGACCTATCAATATCCGTAAACATCCCGAAGAACTCAAAGTATTTTACCACTTACTTTACATCTCCATAGTTTTGGCTCTTTTCATCTTTTTTTTGACATTAGCACAAAAAGAAGTTGTTTTCTCTCACGTTGGCTATGTGAGTGGCGCGTCTGTTATCGTTGGCTTGTTATGCCTACCGCTTCTCATCGCGTTCAGAGAAGAATTTTTTATCTACAAACTCAACAAACAAAATTGCGGTGATTCTTCGGTCATTGTTTCAATTGCTGAGCAAAAACCTCCGGTTGTAAATGTCCCTACCAAATCGGTGTCCGCATTGGAGGAAATAGCTGAAATTCCGCCCTCGTGTTTCGAAAACATATTTAACAAGCCTAAAAGAGGGGAAAATTTCACCATCCTTCAAGCGGTTTTCAGCAAAGATATGGGTCTTATTTTTTTAGCTACTTTTTCTGGATGTGGGTCCTCTCTTGCGGCCATCGATAATTTAGGCCAAATTGGTGAATCACTTGGCTACCCAGCACAAGCCATAAGTATCTTCGTTTCGTGGTTTTCTATATTCAATTTCTTCGGTCGAGTCTTCTCTGGTTTCATCTCTGAGACCTTGATGGCCAAATATCAATTACCACGTCCTCTAATGTTTTCTTTTGCATTTCTCCTCACTTCCATTGGTCAGCTTTGTATCGCCTATCCAACTTCGGGTTCGGTTTACATGGCTTCAATGATTATTGGGTTTGGGTTTGGAGCTCAAGGTCCATTGCTATATGCGATAATCTCTGAGCTTTTTGGGCTCAAGCATTTCTCAGTGTTATTCAATTGTGGGCAATTTGTTGTCCCATTTGGGTCTTATATACTAAATGTGGATATAGTTGGGAAGTTGTATGATATGGAAGCTGCACGTGGAGGTGGAAAAAAGGTGATGGGTAAGGGGATAACTTGCATTGGAGCTCATTGCTTTAGTGGGTCTTTCACAATTTTGGCTGCAGTGACATTGTTTGGAGCTATAATTATGCTTGTGTTGGCTTATAGGACTCGAGAATTTTACAAAGGTGATGTATATAACAAGGGCAGAGAGGACTTGTGGATTCCAAAATCAGAAATAGAGTTCTATCGTTTGAATAACAGGAAGAACATTGGTGACTACACCAAAACTTGA 1755 40.85 MGNHGGAEAWSFIKQVVAGRWFMVFASFLIMIGNGSTYIFGTYSKVIKTEFDYSQTQVNTLGFAKDLGSNFGIFAGLLDEVAPRWALLMCGAFLNFISYFMIWLSITRRIAKPQFWQMFLYICLGTNSANFSNTAVMVTNVGNFPDRRGIILGLLKGFVGIGGAIITQLYLAFYGHDDPSNLVLLYSWLPTIVILLVFITIRPINIRKHPEELKVFYHLLYISIVLALFIFFLTLAQKEVVFSHVGYVSGASVIVGLLCLPLLIAFREEFFIYKLNKQNCGDSSVIVSIAEQKPPVVNVPTKSVSALEEIAEIPPSCFENIFNKPKRGENFTILQAVFSKDMGLIFLATFSGCGSSLAAIDNLGQIGESLGYPAQAISIFVSWFSIFNFFGRVFSGFISETLMAKYQLPRPLMFSFAFLLTSIGQLCIAYPTSGSVYMASMIIGFGFGAQGPLLYAIISELFGLKHFSVLFNCGQFVVPFGSYILNVDIVGKLYDMEAARGGGKKVMGKGITCIGAHCFSGSFTILAAVTLFGAIIMLVLAYRTREFYKGDVYNKGREDLWIPKSEIEFYRLNNRKNIGDYTKT 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35181853 35183607 - Hsped.01g02270.1 Hepe01g0227 559337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0227 584 SUPERFAMILY MFS general substrate transporter 8 210 IPR036259 -
Hepe01g0227 584 SUPERFAMILY MFS general substrate transporter 222 546 IPR036259 -
Hepe01g0227 584 Gene3D MFS general substrate transporter like domains 14 215 IPR036259 -
Hepe01g0227 584 Gene3D MFS general substrate transporter like domains 342 549 IPR036259 -
Hepe01g0227 584 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 555 - GO:0016020(PANTHER)
Hepe01g0227 584 Pfam Nodulin-like 20 265 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0227 Hepe-Chr1:35181853 Hepe10g1064 Hepe-Chr10:42450318 0.0 dispersed
HepeContig71g0007 Hepe-ChrContig71:3885995 Hepe01g0227 Hepe-Chr1:35181853 0.0 transposed
Hepe01g0227 Hepe-Chr1:35181853 Hepe10g1059 Hepe-Chr10:42266266 3.54e-208 wgd
Hepe01g0227 Hepe-Chr1:35181853 Hepe10g0988 Hepe-Chr10:38435255 2.91e-68 wgd
Hepe01g0227 Hepe-Chr1:35181853 Hepe10g0746 Hepe-Chr10:12452836 0.0 wgd
Hepe01g0227 Hepe-Chr1:35181853 Hepe04g0388 Hepe-Chr4:52688208 1.73e-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0227 - - - 0.0