Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0299 ATGATCCCAAATGGTGCCTTCCCGGAACCATTACGGTCACTGCCACCAACTTCTGCCCCCCCAACTACACTCTGCCCAACGACAACGGTGGCTGGTGCAACCCTCCCCTCCAACACTTCGACTTGGCTGTGCCTGCCTTCCTCCAGATCGCTCAGTACTCCGCCGGGATCGTCCCCGTATCCTTTCGAAGTCCCATGCATGAAGAAAGGGGGAGTGAGGTTCACAATCAACGGCAACTCCTACTTCAACTTAGTCTTAATCACCAACGTGGGCGGTGCCGGGGACGTTCACTCGGTGTCGATAAAGGGCGCTCGAACCGGATGGCAGGCGATGTCCCGAAATTGGGGCCAAAACTGGCAGAGCAACAACTATCTCAATGGCCAAGGCTTATCCTTTCAAGTCACTCTTAGCGATGGTCGAACTCTCACTGCCTATAATCTTGCCCCTTCCAATTGGCAGTTTGGCCAAACCTATGAAGGCCCCCAATTCTAA 492 54.27 MIPNGAFPEPLRSLPPTSAPPTTLCPTTTVAGATLPSNTSTWLCLPSSRSLSTPPGSSPYPFEVPCMKKGGVRFTINGNSYFNLVLITNVGGAGDVHSVSIKGARTGWQAMSRNWGQNWQSNNYLNGQGLSFQVTLSDGRTLTAYNLAPSNWQFGQTYEGPQF 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 44207017 44211142 - Hsped.01g02990.1 Hepe01g0299 559409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0299 163 SUPERFAMILY PHL pollen allergen 68 160 IPR036749 -
Hepe01g0299 163 PRINTS Expansin/Lol pI family signature 146 160 IPR007118 GO:0005576(InterPro)
Hepe01g0299 163 PRINTS Expansin/Lol pI family signature 108 122 IPR007118 GO:0005576(InterPro)
Hepe01g0299 163 PRINTS Expansin signature 17 27 IPR002963 GO:0009664(InterPro)
Hepe01g0299 163 PRINTS Expansin signature 117 138 IPR002963 GO:0009664(InterPro)
Hepe01g0299 163 PRINTS Expansin signature 70 82 IPR002963 GO:0009664(InterPro)
Hepe01g0299 163 PRINTS Expansin signature 146 162 IPR002963 GO:0009664(InterPro)
Hepe01g0299 163 PRINTS Expansin signature 82 103 IPR002963 GO:0009664(InterPro)
Hepe01g0299 163 Pfam Expansin C-terminal domain 72 149 IPR007117 -
Hepe01g0299 163 Gene3D - 69 163 IPR036749 -
Hepe01g0299 163 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 81 160 IPR007117 -
Hepe01g0299 163 FunFam Expansin 71 163 - -
Hepe01g0299 163 PANTHER EXPANSIN-A15 63 163 IPR002963 GO:0009664(InterPro)
Hepe01g0299 163 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0299 Hepe-Chr1:44207017 Hepe01g0330 Hepe-Chr1:48956851 2.84e-70 dispersed
Hepe01g0295 Hepe-Chr1:44093800 Hepe01g0299 Hepe-Chr1:44207017 4.53e-71 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0299 - - - 0.0