Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0317 ATGGTTGACAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTTATAGGTAGAGGGAGCTATGGGGTTGTTGCATCTGCCATAGACACTCACTCTGGTGAGAAAGTTGCCATCAAGAAGATCAATAATGTCTTCGAGCATGTTTCTGATGCCACGAGGATTCTAAGAGAAATTAAGCTTCTTCGGTTTCTTCGTCATCCCGATATTGTTGATATAAAACATATAATGCTCCCTCCTTGCAGAAGGGAGTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTCTGATCTTCATGATGTACTCAAGGCTAATGATGATCTCACCCCTCAGCATCATCAATTTTTCTTGTATCAGCTTCTTAGAGCCTTGAAGTATATACATTCAGCCCATGTGTTCCATAGAGATTTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAACTGAAGATCTGTGACTTTGGGCTTGCTCGTGCATCTTTTACTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCAAGCAAGCCTTTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTTGATCTAATAACTGACTTACTCGGTACTCCTTCGGCTGAATGTATTGCAAAGATTCGTAATGAAAAGGCTAAAAGATATTTGAATAGCATGAAAAAAAAGCATCCAGTTCCTCTGTCAAGGAAGTTCCCTAATGCCGATCCACTAGCTCTTCGTTTACTTGAACGACTGCTTGCATTTGATCCTGAAGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCATATTTCCATGGACTGGCAAATCTGGAGGATGAACCATCCAGGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGATGTCAAAGAGCTTGTTTATAGAGAAATTTTAGAGTATCACCCTCAAATGCTACAGGAGTACCTTCAAGGTTCTGGGAGTCACTTCTTGTATCCCAGTGGAATTGATCGATTCAAGCGTCAATTTGATAATCTTGAGGAACATTCTGGTAAAGATGGGAGAGGTAGTCCAGTTCTAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATGTACACCAAGAGATGAAGATGATGACGAAAATGGTAAGACAGAACAACGAAATGCAGCTTCAGCTGAACGTGGAACGCTGCAAAGCCCTCCTGGACCTGGTTATTCATTAACTGCTCAGAATGGTTCTGTTCAAGTAGACTGCAGTAATTATAACCTGTTGAAGAGTGCAAGTATAAATTGTTCTAAATGGGTGGATTAA 1422 40.86 MVDKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHIMLPPCRREFKDLYIVFELMESDLHDVLKANDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLNSMKKKHPVPLSRKFPNADPLALRLLERLLAFDPEDRPSAEEALADPYFHGLANLEDEPSRQPISKLEFEFERRKLTKDDVKELVYREILEYHPQMLQEYLQGSGSHFLYPSGIDRFKRQFDNLEEHSGKDGRGSPVLRKHASLPRERICTPRDEDDDENGKTEQRNAASAERGTLQSPPGPGYSLTAQNGSVQVDCSNYNLLKSASINCSKWVD 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 47132701 47142229 + Hsped.01g03170.1 Hepe01g0317 559427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0317 473 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0317 473 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Hepe01g0317 473 FunFam Mitogen-activated protein kinase 102 330 - -
Hepe01g0317 473 SMART serkin_6 16 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0317 473 MobiDBLite consensus disorder prediction 425 445 - -
Hepe01g0317 473 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0317 473 Gene3D Phosphorylase Kinase; domain 1 32 353 - -
Hepe01g0317 473 MobiDBLite consensus disorder prediction 383 424 - -
Hepe01g0317 473 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0317 473 FunFam Mitogen-activated protein kinase 5 109 - -
Hepe01g0317 473 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524(InterPro)
Hepe01g0317 473 CDD STKc_TDY_MAPK 15 352 - -
Hepe01g0317 473 Gene3D Transferase(Phosphotransferase) domain 1 102 330 - -
Hepe01g0317 473 MobiDBLite consensus disorder prediction 383 445 - -
Hepe01g0317 473 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 348 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0317 Hepe-Chr1:47132701 Hepe09g0380 Hepe-Chr9:3381297 4.56e-257 dispersed
Hepe07g2563 Hepe-Chr7:70065391 Hepe01g0317 Hepe-Chr1:47132701 8.46e-28 transposed
Hepe02g3315 Hepe-Chr2:82747067 Hepe01g0317 Hepe-Chr1:47132701 1.41e-29 transposed
Hepe01g0317 Hepe-Chr1:47132701 Hepe01g0473 Hepe-Chr1:61566435 0.0 wgd
Hepe01g0317 Hepe-Chr1:47132701 Hepe07g1598 Hepe-Chr7:55767256 1.74e-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72440 PF00069 Pkinase 1.40E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0317 - - - 0.0