Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0398 ATGGGAGACGACGGCAACAACAGCAATGGTGGCAGCCGGGTGGCGCCGCCGCGGGGTCCGGCGGAGCACTGTGTTGAAATTGTTCATCCGGTGGTTCCGCCGCCACGAAGAAGCGGAATGCAGAAACTGGGAAACCGGCTGAAGGAAACATTTTTTCCCGACGATCCCCTCCGGCAGTTCAAAGGGCAGTCTCCGGCGAGGAAATGGGTGATTGGAGCTCAATATTTTTTCCCAATTCTTCAATGGGGACCTCATTATAATCTTAGGCTTTTTAAATCCGATGTTGTTGCTGGCCTCACCATTGCTAGCTTGGCCATCCCTCAGGGTATTAGCTATGCTAAGCTTGCTAATTTGCCTCCAATTGTTGGGCTTTATTCAAGCTTTGTTCCACCACTGGTATATGCTGTTCTTGGAAGCTCAAGAGACCTAGCTGTTGGACCAGTGTCAATAGCATCACTAATATTGGGATCCATGTTGAGGCAAGAAGTTTCCCCCATCAAAGATCCTATTCTCTTTCTCCAACTCGGCTTCACTTCTACCTTCTTCGCCGGTCTCTTCCAGGCCTCGCTCGGCTTTCTAAGACTTGGGTTTATAATTGATTTTCTATCAAAGGCAACTCTGATTGGATTTATGGCTGGAGCAGCCATTATTGTGTCTCTACAACAACTTAAAGGGTTGCTTGGAATTACCCATTTCACCAAACAGATGGGTTTGATCCCTGTTTTGAGCTCAGTTTTTCATCACACTCACGAGTGGTCATGGCAGACTATACTCATGGGCTTTTGTTTCCTTCTCTTTCTTCTACTCACCAGACATATAAGTATGAGAAAGCCGAAGTTATTCTGGGTGTCAGCGGGAGCTCCTTTGGTGTCGGTGATTCTTTCTACCGTTTTAGTTTTTGCGTTCAAGGCCGATCGTCGTGGCATCAGTATAATAGGAAAGTTGCAACAAGGGTTGAACCCACCTTCATGGAACATGCTTCGTTTTCAAGGGTCGCATCTTGGCCTTGTTATCAAGACTGGCCTCGTCACTGGCATCATCTCTCTCACTGAAGGAATCGCAGTGGGGCGAACATTTGCAGCTATAAAAGACTATCGAGTCGATGGTAACAAAGAAATGATAGCAATCGGCCTCATGAACGTCGTGGGCTCGTTCACTTCTTGCTACATAACAACAGGTGCATTTTCAAGGTCGGCGGTGAACCATAACGCGGGGGCAAAAACAGCAGTGTCGAACATCGTCATGTCAGTGACGATAATGGTGACACTGCTGTTTTTGATGCCTTTGTTTGAGTACACGCCGAATCTGGTTCTGGCCGCCATCATCGTCACCGCCGTCATCGGCCTTATCGACGTTCCCGCCGCCTACGGCATTTGGAAGGTCGATAAGTTCGATTTTCTTGTCATGCTCTGTGCCTTCTTCGGCGTCATCCTCATCTCTGTTCAACACGGTCTCGCCATTGCTGTTGGGATATCCATTTTCAAGATCATCTTACAAATCACCAGACCAAAAACAGTGATGTTGGGGAATATACCAGGAACAGATATATATAGAAACCTTCACCATTACAAAGATGCAATGAATGTCCAAGGTTTCCTCATTTTAAGCATTGAAGCTCCAATCAACTTTGCCAACACAACATATCTCAATGAAAGGATTTTGAGATGGATTGAAGACTATGAAGCTGAAGATCATGTTAAGAAGGAGGGCTCTGGCCTTCAGTTTCTGATTTTAGAATTGTCAGCTGTGAGTGGTATAGACACCAGTGGAGTCCTACTCTTCAAGGATCTAAAAAGAGCATTGGAAAAGAAGAGTGTTGAGCTTGTGTTGGTGAACCCATTGGGTGAAGTTTTGGAGAAGTTGCAAAAAGCAGATGAAAATCAAGAGATTTTGAGGCCAAATAATGTGTTTTTGACAGTGGGAGAGGCCATTGCTTCACTATCAGCAACAATGAAGGGACAATCCTCAAATATATAG 1977 45.78 MGDDGNNSNGGSRVAPPRGPAEHCVEIVHPVVPPPRRSGMQKLGNRLKETFFPDDPLRQFKGQSPARKWVIGAQYFFPILQWGPHYNLRLFKSDVVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPIKDPILFLQLGFTSTFFAGLFQASLGFLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKGLLGITHFTKQMGLIPVLSSVFHHTHEWSWQTILMGFCFLLFLLLTRHISMRKPKLFWVSAGAPLVSVILSTVLVFAFKADRRGISIIGKLQQGLNPPSWNMLRFQGSHLGLVIKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYITTGAFSRSAVNHNAGAKTAVSNIVMSVTIMVTLLFLMPLFEYTPNLVLAAIIVTAVIGLIDVPAAYGIWKVDKFDFLVMLCAFFGVILISVQHGLAIAVGISIFKIILQITRPKTVMLGNIPGTDIYRNLHHYKDAMNVQGFLILSIEAPINFANTTYLNERILRWIEDYEAEDHVKKEGSGLQFLILELSAVSGIDTSGVLLFKDLKRALEKKSVELVLVNPLGEVLEKLQKADENQEILRPNNVFLTVGEAIASLSATMKGQSSNI 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55983863 55995341 + Hsped.01g03980.1 Hepe01g0398 559508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0398 658 Pfam STAS domain 526 643 IPR002645 -
Hepe01g0398 658 CDD STAS_SulP_like_sulfate_transporter 523 640 - -
Hepe01g0398 658 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Hepe01g0398 658 PANTHER SULFATE TRANSPORTER 46 645 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0398 658 SUPERFAMILY SpoIIaa-like 529 647 IPR036513 -
Hepe01g0398 658 FunFam Sulfate transporter 31 502 650 - -
Hepe01g0398 658 MobiDBLite consensus disorder prediction 1 20 - -
Hepe01g0398 658 Gene3D STAS domain 502 650 IPR036513 -
Hepe01g0398 658 ProSiteProfiles STAS domain profile. 522 647 IPR002645 -
Hepe01g0398 658 NCBIfam sulfate permease 78 642 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0398 658 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0398 Hepe-Chr1:55983863 Hepe03g2029 Hepe-Chr3:77628122 5.17e-255 dispersed
Hepe01g0398 Hepe-Chr1:55983863 Hepe03g1569 Hepe-Chr3:72488887 1.72e-285 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0398 K17471 - csv:101219163 1163.67