Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0428 ATGTTGATGTTGAGTGATTTGAAGATTTCTAATCTGTTCTCTGCGATGAAAATGTTGTTTGTCTTGTTGGTTTGGGTACTTCCTCTGGTTCGAGCTGGAGATGCAGAAGCTTTGTTAGCATTGAAAGAATCTCTCGATCCTGGGAACTCGCTTCCATGGCGAGGAAGCTCTGTCTGCAACTGGGAAGGGGTGAAAGAGTGCAGAAATGGAAGGGTAACTAAGCTCGTTTTGGAGCATCTAAATCTCTCTGGTGTTCTTAACAACAAGATTTTGAATCGTTTAGATCAGCTTCGAGTTCTTAGTTTCAAAGGAAATTCACTTTCCGGCCAAATCCCTGATCTCTCCAGTCTCGTTAATCTCAAATCCCTCTATCTAAGCGACAACAATTTCTCCGGTGAGTTTCCGAGCTCCATCTCTGATCTCCACCGCTTGAAGGTCGTCGTTCTTTCCGGTAACCAAATGTCTGGCCCCATTCCAGATTCGCTCCTCAAACTCCGGCGTCTCTATGTTCTACACCTACAGGACAACCAATTCACCGGCTCCATCCCTCCTTTCAACCAAACCAGCCTCCGATTCTTCAATGTCTCTAACAACCACCTCTCCGGCGACATCCCAGTAACCCCCACCTTGGTCCGATTCAACGTGTCGTCATTCTCCGGCAATCTGGAGCTTTGCGGAGAACAAATTCAAAACCCATGTGGAAATGATTCCGTTGCACCATCATTAAGTCCCTCGTATCCACAAGTCCTGAGCTCAAGATCGTCTTCAAGACGGAACAAATTGGTGAAGATAATAGCAGGAAGCGTTGGTGGGTTTGTCGGACTTCTATTAATCATCCTTCTACTGTGTATGATTTGTAAATGTAGGGAAAGAAAGAGCCTGGCGGAGGTTAGAAACAAAGGAATCGGCGACGAGGGGATGACGGAGGAAGCATCAGGAACAGGAACTGGAACTGGAAGTGCCGGCGGTGGTGGCCACGGCGGAAAGCAAGGGGGATTTTCATGGGAAAGTGAAGGATTAGGGAGTTTAGTGTTCTGTGGAGCAGGGGATCAGAAAATGACATATAGTTTGGAAGATCTGTTGAAAGCTTCGGCGGAGACATTGGGGAGAGGGACGATCGGAAGCACATACAAGGCGGTGATGGAATCTGGGTATATTGTGACGGTGAAACGGCTGAAGGATGCAAGGTACCCACGGCCGGAGGAATTCGGACGGCAGCTGGAGATTCTGGGGCGGCTGAGACACCCTAATTTGGTTCCTCTCAGGGCGTATTTCCAGGCTAAGGAGGAACGCTTGCTCGTATACGATTATTTCCCCAATGGCAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGGGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATAGCTGAAGACTTGGCCAATGGTCTGCTCTATATCCACCAAAACCCAGGCACAACACATGGAAACCTCAAATCCTCAAACGTACTATTAGGATCCGATTTCGAGTCTTGTCTTACTGATTACGGTCTTAATTTATTCCGAGATCCCGATTCACTCGAAGAACCCAGTGCAACTTCACTCTTTTACCGAGCTCCCGAATGCCGCGACATCCGTAAGGCAACCACACAACAAGCCGACGTCTATAGCTTTGGTGTTCTTCTGTTAGAGCTTCTAACTGGAAAAACACCATTCCAAGATCTAGTTCAAGAACACGGTTCCGACATTCCCAAGTGGGTTAGTTCAGTTAGAGAAGAGGAGACGGAGTCCGGGGACGATCCCGCGTCTGGAAACGAGGCATCGGAAGAGAAACTTCAAGCTCTTTTGAACATTGCAATGGCTTGTGTTTCGCTTATGCCGCATAACCGACCTACGATGAGGGAAGTTCTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGTAGTGATCATTCACCAGGGAGATGGTCAGATATTGTCCAGAGTTTGCCAAGGGAAGAACATTTAAGCATTTGA 2004 47.6 MLMLSDLKISNLFSAMKMLFVLLVWVLPLVRAGDAEALLALKESLDPGNSLPWRGSSVCNWEGVKECRNGRVTKLVLEHLNLSGVLNNKILNRLDQLRVLSFKGNSLSGQIPDLSSLVNLKSLYLSDNNFSGEFPSSISDLHRLKVVVLSGNQMSGPIPDSLLKLRRLYVLHLQDNQFTGSIPPFNQTSLRFFNVSNNHLSGDIPVTPTLVRFNVSSFSGNLELCGEQIQNPCGNDSVAPSLSPSYPQVLSSRSSSRRNKLVKIIAGSVGGFVGLLLIILLLCMICKCRERKSLAEVRNKGIGDEGMTEEASGTGTGTGSAGGGGHGGKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDARYPRPEEFGRQLEILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGTTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKATTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLMPHNRPTMREVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57757642 57764263 + Hsped.01g04280.1 Hepe01g0428 559538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0428 667 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Hepe01g0428 667 Gene3D Phosphorylase Kinase; domain 1 345 437 - -
Hepe01g0428 667 ProSiteProfiles Protein kinase domain profile. 362 640 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0428 667 Gene3D Transferase(Phosphotransferase) domain 1 438 653 - -
Hepe01g0428 667 FunFam Nuclear pore complex protein NUP107 31 184 - -
Hepe01g0428 667 MobiDBLite consensus disorder prediction 577 598 - -
Hepe01g0428 667 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515(InterPro)
Hepe01g0428 667 Gene3D Ribonuclease Inhibitor 188 236 IPR032675 -
Hepe01g0428 667 SUPERFAMILY L domain-like 34 225 - -
Hepe01g0428 667 MobiDBLite consensus disorder prediction 638 652 - -
Hepe01g0428 667 Pfam Leucine rich repeat N-terminal domain 33 64 IPR013210 -
Hepe01g0428 667 SUPERFAMILY Protein kinase-like (PK-like) 366 634 IPR011009 -
Hepe01g0428 667 MobiDBLite consensus disorder prediction 638 667 - -
Hepe01g0428 667 MobiDBLite consensus disorder prediction 304 329 - -
Hepe01g0428 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 639 IPR046959 -
Hepe01g0428 667 SMART serkin_6 362 640 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0428 667 Pfam Protein kinase domain 365 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0428 Hepe-Chr1:57757642 Hepe04g1261 Hepe-Chr4:68140587 4.97e-127 dispersed
Hepe01g0428 Hepe-Chr1:57757642 Hepe07g1707 Hepe-Chr7:58888489 2.73e-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72441 PF00069 Pkinase 8.60E-36 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0428 - - - 0.0