Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0478 ATGAAACATTTCATTGTTTTTCTGGAAAGTAATCCTGTTTTACATGAGGTTGATGCAGCAGAATCACATCTAAATGTTCTCATGTCAGTGAAGGAAAGTCATGTCGAGGCAAAGAAGTCCATTGTCTATAGTTACACAAAAAGCTTCAATGCATTTGCTGCCAAACTTACTGAAGAGGAAGCTCAAACAGTGTCAAAGAGAGAAGATGTGCATAATGTGATCCAAAACAAGTATAGAAAGCTACAAACAACAAGATCATGGGACTTCATTGGATTGCCTTCCAATGCAAAAAGAAATACCCAACAGGAGAGTGATATTATTGTGGGTTTATTTGATACTGGGATCACACCAACAGCAGAGAGTTTTAAAGATGACGGGTTTGGTCCTCCACCCCAAAAATGGAAAGGCACTTGTCTCCAGTATGCCAATTTCACTGGCTGCAACAACAAACTCATCGGAGCAAGATATTTCAAGCTCGATGGCAGCCCCAATCCCCTCGACATCTTGTCGCCGATAGACGTTGATGGCCACGGCACGCACACATCCACAACAGCAACCGGCAATGCAATCCCCGGAGCCAGCCTCTCCGGTCTGGCCGAAGGAACCGCTCGTGGCGGTGTGCCGTCGGCAAGAGTTGCCATGTACAAGGTCTGTTGGGTCGGCATTGGGTGCTCCGATATGGATCTTTTGGCCGCCTTCGATGCCGCCATACAGGACAACGTCGATGTCATTTCAATATCGATAGGCGGCCAAGGCTTCGGCAATTACTCTGAGGACGCAATCTCCATCGGCGCGTTTCATGCCACGAAGAGGGGCATCATCACTGTGACCGCCGCCGGGAATTACGTTGCTGCCAGTGAAATTGATCGGAAATTTATCACCCCATTGGAGTTGGGCAATGGGGACAACATCTATGGAGAAGGAATAAACATATTCAATCCCGAGCAAAAAATGTACCCTTTAGTGAGTGGAGTTGATGCGGCTATGAACCCAGAGAGCAAAGAAAGTGCAAGATTTTGCGTTGATGCGGCTGGCCTCGTCCAGTACGTAAATTTTTCCGACAAAAAAAAAGTCGTCGGGAGGATCGTCAAAATATCCTCGTCAGGAAGACCTTTGCCGACGCCACAACACACGACGTTCAGAAAGGCTACGTTTGCAGACGCGACTACACTGTGGAGACTCACTGTTTTTTTTTTTTTTTTTTTTTTGTTTAGTCTAAGAAATGTAACACGAACCGCAGTCATATACAAAACAAGACAACTCAATAGAACAACTCCAATGGTCGCTTCCTTCTCATCTAGAGGCCCCAATCGAGGCTCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGATATATTGGCTGGTTACACCCCATTGAAGTCACTGACTGGGTTGAAGGGTGACACTCAATTCTCCAAATCCACCCTCATGTCGGGTACTTCTATGGCCTGCCCCCACGTCGCTGCCACCGCCGCCTATGTCAAGTCTTTCAACCCTCTTTGGTCTCCGGCCGCCATTCGATCCGCCTTGATCACCACCGCAATACCAATGAGTCGAGAACTGAATCCCGACGGAGAATTCGCGTACGGTGCGGGCAACCTAAATCCAGCTAAAGCCAAAAACCCTGGCTTAGTCTACGATGTCAATGAAACGTCATACATCCAATTCCTTTGCAGCGAAGGCTACACCGGATCTTCAATTTCCATTCTCACCGAAACCAAATCCATAAACTGCTCCACTCTAATCCCCGGCTCGAGCTACGATTCTCTAAATTACCCAACCTTTCAACTTAGCCTCAACAGCAGCGAACAACCAACGACTGTCGTGTTCTGGCGGGAAGTCACCAACGTCGGTCTCCCCAACTCCATCTACAACGCCACCATCACGACTCCCCCTGGGGTGGAGATCACAGTGGTGCCGACGACTCTGTCGTTCTCGCAACTGCTGCAGAAGCAAAGCTTTAAAGTTACTGTGAAGGCTAGTCCTTTTCCATCAGTGAACATGGTGTCGGGTTCCCTTGCTTGGGTTGATGCCCAACATGTCGTGAGAAGTCCTATTGTTATTTATAGCCCGTGA 2085 48.2 MKHFIVFLESNPVLHEVDAAESHLNVLMSVKESHVEAKKSIVYSYTKSFNAFAAKLTEEEAQTVSKREDVHNVIQNKYRKLQTTRSWDFIGLPSNAKRNTQQESDIIVGLFDTGITPTAESFKDDGFGPPPQKWKGTCLQYANFTGCNNKLIGARYFKLDGSPNPLDILSPIDVDGHGTHTSTTATGNAIPGASLSGLAEGTARGGVPSARVAMYKVCWVGIGCSDMDLLAAFDAAIQDNVDVISISIGGQGFGNYSEDAISIGAFHATKRGIITVTAAGNYVAASEIDRKFITPLELGNGDNIYGEGINIFNPEQKMYPLVSGVDAAMNPESKESARFCVDAAGLVQYVNFSDKKKVVGRIVKISSSGRPLPTPQHTTFRKATFADATTLWRLTVFFFFFFLFSLRNVTRTAVIYKTRQLNRTTPMVASFSSRGPNRGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKSTLMSGTSMACPHVAATAAYVKSFNPLWSPAAIRSALITTAIPMSRELNPDGEFAYGAGNLNPAKAKNPGLVYDVNETSYIQFLCSEGYTGSSISILTETKSINCSTLIPGSSYDSLNYPTFQLSLNSSEQPTTVVFWREVTNVGLPNSIYNATITTPPGVEITVVPTTLSFSQLLQKQSFKVTVKASPFPSVNMVSGSLAWVDAQHVVRSPIVIYSP 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 61708891 61717446 + Hsped.01g04780.1 Hepe01g0478 559588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0478 694 Gene3D - 289 367 - -
Hepe01g0478 694 Gene3D - 412 421 - -
Hepe01g0478 694 PRINTS Subtilisin serine protease family (S8) signature 103 122 IPR015500 -
Hepe01g0478 694 PRINTS Subtilisin serine protease family (S8) signature 481 497 IPR015500 -
Hepe01g0478 694 PRINTS Subtilisin serine protease family (S8) signature 173 186 IPR015500 -
Hepe01g0478 694 SUPERFAMILY Subtilisin-like 81 547 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe01g0478 694 Pfam Subtilase family 104 533 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Hepe01g0478 694 Pfam Fibronectin type-III domain 593 691 IPR041469 -
Hepe01g0478 694 Gene3D - 560 693 - -
Hepe01g0478 694 CDD Peptidases_S8_3 80 518 IPR034197 -
Hepe01g0478 694 ProSitePatterns Serine proteases, subtilase family, serine active site. 482 492 IPR023828 -
Hepe01g0478 694 Pfam Peptidase inhibitor I9 4 82 IPR010259 -
Hepe01g0478 694 ProSiteProfiles Serine proteases, subtilase domain profile. 86 543 - -
Hepe01g0478 694 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Hepe01g0478 694 Gene3D Peptidase S8/S53 domain 105 288 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe01g0478 694 Gene3D Peptidase S8/S53 domain 422 556 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe01g0478 694 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 690 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0478 Hepe-Chr1:61708891 Hepe01g0480 Hepe-Chr1:61817997 0.0 dispersed
Hepe01g0477 Hepe-Chr1:61688266 Hepe01g0478 Hepe-Chr1:61708891 0.0 tandem
Hepe01g0478 Hepe-Chr1:61708891 Hepe01g0479 Hepe-Chr1:61735172 0.0 tandem
Hepe01g0478 Hepe-Chr1:61708891 Hepe06g0101 Hepe-Chr6:3197718 6.17e-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0478 - - - 0.0