Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0547 ATGAACAATCGGACAGGACTTCTTCGAATTCGCCTGTTGCGAGGCATGAATCTCGCCATTCGCGATGCTCCCACCCGCAGCAGCGATCCCTACGCTGTCATCTCCACCGCCAATCAGAAATTCAAATCTCGCGTGGTGAAAAAGAACTGCAATCCAGAATGGAACGAGGAATTCACGCTTTCGATCACAGATATCAACACACCAATCAAATTAGCACTGTTCGACAAAGATAGGTTCACAAAAGACGATACAATGGGGGATGCCGAGATCGACATAAAACCATACATAGAGTGTTTGAATATGGGATTAGAGAATCTGCCAAATGGGTGTGTGGTGAAAAGGGTTCAACCAAGCAGATTAAACAGCCTTGCAGATGAAAGCCCTTGTGTTTGGAACGATGGCAAGATAATCCAAGACATGACTCTCAGATTGCAGAATGTTGAATGTGGTGAAATCATGATTCAGCTTCAGTTGTTCAATGCCTCTGGGATTAGAGGTTTAAGAACCCAGTCTTTAGCCTGA 522 44.83 MNNRTGLLRIRLLRGMNLAIRDAPTRSSDPYAVISTANQKFKSRVVKKNCNPEWNEEFTLSITDINTPIKLALFDKDRFTKDDTMGDAEIDIKPYIECLNMGLENLPNGCVVKRVQPSRLNSLADESPCVWNDGKIIQDMTLRLQNVECGEIMIQLQLFNASGIRGLRTQSLA 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 64949248 64950868 + Hsped.01g05470.1 Hepe01g0547 559657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0547 173 CDD C2_ArfGAP 6 150 - -
Hepe01g0547 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 93 IPR035892 -
Hepe01g0547 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Hepe01g0547 173 Pfam C2 domain 6 94 IPR000008 -
Hepe01g0547 173 Gene3D C2 domain 1 166 IPR035892 -
Hepe01g0547 173 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Hepe01g0547 173 SMART C2_3c 7 104 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0547 Hepe-Chr1:64949248 Hepe07g2353 Hepe-Chr7:67880684 4.47e-68 dispersed
Hepe01g0547 Hepe-Chr1:64949248 Hepe02g2647 Hepe-Chr2:73966681 1.20e-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0547 - - - 0.0