Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0559 ATGATAAAGCAACCGCACTCATTGATTCAAATTCCCAACAAATTTGAATTCATCGGAAGCATTAGCAGAGTCAGATTCTGTTCCTCGATCCTTCCTTCCTCCGCCTTCCAAATCAAATCGCTGGGGAATCTCACCTCCACTCGCTCCCGCAACCACCATCGCCGGCCGCCCATGGCCGCCTCCTCCTCCTCTTCCCCGGGCAACCCTTCATCCTCCTCCAGCTCTTTCATTTTCTCCCCCGATTCTCCCCCTAGACTTTCCCTCACACCCCATCAGATTAAGCTTTGTTCCCAAGCTCTTGAGGCCTTCAGGGAGAAGCTCCACATGCCTGATGTCATCGATCTGGAGTTCGCCCGATTGGAGGCCAAGAGAATAACTGTATCTGATATGAGGAGAAGTTGCTCTGTGGCTTTTGACAACGTCAACATAGACAAAAATCGTTACACGAATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGTAAGGATTACAGACCTTCTGCAAGGGGTTATATCAATGCAAGCTTTATTTCGACTCCCTCCTCAACAAGAATTTCTAAGTTTATTGCCACACAAGGTCCATTACCACACACGTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACACGTCTTGTTGATAATTACAAGATGGTGAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATCTATTTGTCGTCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAATCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTGCATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTACTGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCACTTACCGCCCAATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGCGCTATTCATAACACAATTCAGAGAATCCTTACCGGAGACATGTCTGCTTTAGATCTTGTCAGTACCATTTCCACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATATTTTTTCTGCTATAGAACCATTGTTGATGAACTAGAAGACCTTATATCTGTTCCGCAATAG 1176 44.73 MIKQPHSLIQIPNKFEFIGSISRVRFCSSILPSSAFQIKSLGNLTSTRSRNHHRRPPMAASSSSSPGNPSSSSSSFIFSPDSPPRLSLTPHQIKLCSQALEAFREKLHMPDVIDLEFARLEAKRITVSDMRRSCSVAFDNVNIDKNRYTNVLPFDETRVVLDSCKDYRPSARGYINASFISTPSSTRISKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLFVVSKWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPTDTLAVREMLKRLYHLPPNLGPIVVHCSAGIGRTGTYCAIHNTIQRILTGDMSALDLVSTISTFRSQRIGMVQTLDQYFFCYRTIVDELEDLISVPQ 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 65602921 65612602 + Hsped.01g05590.1 Hepe01g0559 559669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0559 391 FunFam Tyrosine-protein phosphatase non-receptor type 12 90 389 - -
Hepe01g0559 391 Gene3D Protein tyrosine phosphatase superfamily 88 386 IPR029021 -
Hepe01g0559 391 Pfam Protein-tyrosine phosphatase 142 380 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 CDD PTPc_plant_PTP1 174 376 - -
Hepe01g0559 391 ProSitePatterns Tyrosine specific protein phosphatases active site. 319 329 IPR016130 GO:0016311(InterPro)
Hepe01g0559 391 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 55 383 IPR050348 GO:0004725(PANTHER)
Hepe01g0559 391 MobiDBLite consensus disorder prediction 56 82 - -
Hepe01g0559 391 PRINTS Protein tyrosine phosphatase signature 173 180 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 PRINTS Protein tyrosine phosphatase signature 278 295 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 PRINTS Protein tyrosine phosphatase signature 316 334 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 PRINTS Protein tyrosine phosphatase signature 365 375 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 PRINTS Protein tyrosine phosphatase signature 349 364 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 PRINTS Protein tyrosine phosphatase signature 191 211 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 MobiDBLite consensus disorder prediction 46 82 - -
Hepe01g0559 391 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 384 IPR029021 -
Hepe01g0559 391 SMART ptp_7 279 381 IPR003595 -
Hepe01g0559 391 SMART PTPc_3 112 384 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 ProSiteProfiles PTP type protein phosphatase domain profile. 113 382 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Hepe01g0559 391 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 298 373 IPR000387 GO:0016311(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0559 - - - 0.0