Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g0559 | ATGATAAAGCAACCGCACTCATTGATTCAAATTCCCAACAAATTTGAATTCATCGGAAGCATTAGCAGAGTCAGATTCTGTTCCTCGATCCTTCCTTCCTCCGCCTTCCAAATCAAATCGCTGGGGAATCTCACCTCCACTCGCTCCCGCAACCACCATCGCCGGCCGCCCATGGCCGCCTCCTCCTCCTCTTCCCCGGGCAACCCTTCATCCTCCTCCAGCTCTTTCATTTTCTCCCCCGATTCTCCCCCTAGACTTTCCCTCACACCCCATCAGATTAAGCTTTGTTCCCAAGCTCTTGAGGCCTTCAGGGAGAAGCTCCACATGCCTGATGTCATCGATCTGGAGTTCGCCCGATTGGAGGCCAAGAGAATAACTGTATCTGATATGAGGAGAAGTTGCTCTGTGGCTTTTGACAACGTCAACATAGACAAAAATCGTTACACGAATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGTAAGGATTACAGACCTTCTGCAAGGGGTTATATCAATGCAAGCTTTATTTCGACTCCCTCCTCAACAAGAATTTCTAAGTTTATTGCCACACAAGGTCCATTACCACACACGTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACACGTCTTGTTGATAATTACAAGATGGTGAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATCTATTTGTCGTCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAATCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTGCATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTACTGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCACTTACCGCCCAATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGCGCTATTCATAACACAATTCAGAGAATCCTTACCGGAGACATGTCTGCTTTAGATCTTGTCAGTACCATTTCCACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATATTTTTTCTGCTATAGAACCATTGTTGATGAACTAGAAGACCTTATATCTGTTCCGCAATAG | 1176 | 44.73 | MIKQPHSLIQIPNKFEFIGSISRVRFCSSILPSSAFQIKSLGNLTSTRSRNHHRRPPMAASSSSSPGNPSSSSSSFIFSPDSPPRLSLTPHQIKLCSQALEAFREKLHMPDVIDLEFARLEAKRITVSDMRRSCSVAFDNVNIDKNRYTNVLPFDETRVVLDSCKDYRPSARGYINASFISTPSSTRISKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLFVVSKWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPTDTLAVREMLKRLYHLPPNLGPIVVHCSAGIGRTGTYCAIHNTIQRILTGDMSALDLVSTISTFRSQRIGMVQTLDQYFFCYRTIVDELEDLISVPQ | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 65602921 | 65612602 | + | Hsped.01g05590.1 | Hepe01g0559 | 559669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g0559 | 391 | FunFam | Tyrosine-protein phosphatase non-receptor type 12 | 90 | 389 | - | - | |
Hepe01g0559 | 391 | Gene3D | Protein tyrosine phosphatase superfamily | 88 | 386 | IPR029021 | - | |
Hepe01g0559 | 391 | Pfam | Protein-tyrosine phosphatase | 142 | 380 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | CDD | PTPc_plant_PTP1 | 174 | 376 | - | - | |
Hepe01g0559 | 391 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 319 | 329 | IPR016130 | GO:0016311(InterPro) | |
Hepe01g0559 | 391 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 55 | 383 | IPR050348 | GO:0004725(PANTHER) | |
Hepe01g0559 | 391 | MobiDBLite | consensus disorder prediction | 56 | 82 | - | - | |
Hepe01g0559 | 391 | PRINTS | Protein tyrosine phosphatase signature | 173 | 180 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | PRINTS | Protein tyrosine phosphatase signature | 278 | 295 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | PRINTS | Protein tyrosine phosphatase signature | 316 | 334 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | PRINTS | Protein tyrosine phosphatase signature | 365 | 375 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | PRINTS | Protein tyrosine phosphatase signature | 349 | 364 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | PRINTS | Protein tyrosine phosphatase signature | 191 | 211 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | MobiDBLite | consensus disorder prediction | 46 | 82 | - | - | |
Hepe01g0559 | 391 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 90 | 384 | IPR029021 | - | |
Hepe01g0559 | 391 | SMART | ptp_7 | 279 | 381 | IPR003595 | - | |
Hepe01g0559 | 391 | SMART | PTPc_3 | 112 | 384 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 113 | 382 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Hepe01g0559 | 391 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 298 | 373 | IPR000387 | GO:0016311(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g0559 | - | - | - | 0.0 |