Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0576 ATGTTCATTCCCGCTGCCATTAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTCGCCGACGGGTAGGCTTCAGCAAACCTTGGCCGGATGTCTGGAGTTGAGTGGGACTTCTCTTCACTCGGGGACGGTTTCGAAAGTGAAGTTATGTCCGGAATTTGCTGGCAGAGGGAGGTATTTTGATTTCAAGTCCAAATTCATTCCTGCGTCGATTGATTATGCCGAAGATTCGCCTCTTTGTACCACGCTCTCTAAGGATGGGCTTAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCCTGGAGGCCATGGGGGTTGACAATTGTAGGATCGAGATAGGGAATGAAGATGCTGAAGATACTGAAGTCGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCGATAGAGGAGGTTGGTCTTAAGTTGGCTATAGACCAGTGTGGAAATTGCTGTGAGAAAATGGCACCATATGTAAATGAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTCGTATTACTTATGGAATTGACTTTCCTCAGGTGTCTGGCATTGGCTGCCAATGGTTTTCTACTGCTCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCCCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAACAAATGCGTAATATTGGACTCATAAAAGGAGGCTCAATAGAAAATGCTTTAGTTTGCAGTATTAGTAAAGGTTGGATCAATCCCCCATTGCGTTTCCACGATGAACCTTGTCGCCACAAGGTTTTAGATTTTATTGGCGATCTCTCACTTTTTGCTCAGTTTGGCAGTCAAGGGCTTCCAATGGCACACATATTGGTTTACAAGGGTGGTCATGCTATGCATGCCAATTTTGTTCGCCGCTTATCCGAAAACATTCAAGTGGACAAGTAG 954 45.07 MFIPAAINALKSSRSISWSPTGRLQQTLAGCLELSGTSLHSGTVSKVKLCPEFAGRGRYFDFKSKFIPASIDYAEDSPLCTTLSKDGLKIRTVEHLLSALEAMGVDNCRIEIGNEDAEDTEVEVPIFDGSAGKWVDAIEEVGLKLAIDQCGNCCEKMAPYVNEPVHVWRNDCYLVAFPASAVRITYGIDFPQVSGIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNIGLIKGGSIENALVCSISKGWINPPLRFHDEPCRHKVLDFIGDLSLFAQFGSQGLPMAHILVYKGGHAMHANFVRRLSENIQVDK 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 66702871 66717795 - Hsped.01g05760.1 Hepe01g0576 559686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0576 317 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 25 312 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Hepe01g0576 317 Gene3D lpxc deacetylase, domain 1 23 148 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
Hepe01g0576 317 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 314 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Hepe01g0576 317 Gene3D lpxc deacetylase, domain 2 160 317 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Hepe01g0576 317 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 144 IPR020568 -
Hepe01g0576 317 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 311 IPR020568 -
Hepe01g0576 317 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 310 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Hepe01g0576 317 Hamap UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 23 314 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0576 K02535 - csv:101205101 577.015