Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0588 ATGGCAGAACTGTCGAATCTCTCCTCGAGCCCCAGCCAAGAAACTCCGAACGTGCTGCAGAAACATGTGGCGTTCTTCGATAGGAACAAAGACGGCGTCGTTTATCCTTGGGAAACCTTCAAGGGCTTCCGAGCAATCGGAGCCAATTTGTTCTTGTCCACCGTCAGTGCTGTTTTTATTAACGTTGGACTCAGCTCGAAAACCCGACCGGGGAAATTTCCTAACCTTCTGTTCCCAATTGAGATAAAGAACATTCAACTTGGCAAGCATGGAAGTGATTCTGGTGTTTATGATACTGAAGGAAGGTTTGTTGCATCAAGATTTGAAGAAATTTTCAAGAAGCATGCACTAACCTATCCAGATGCCTTGACAGAAGAAGAGCTTAAAGCTTTGCTCAAGGCAAATAGAGAGCCCAAAGACTACGCAGGATGGGTTGGTGCATGGGCAGAATGGACAACTCTGTACAGCCTTTGCAAAGATGAGAATGGTTTACTTACAAAGAAAACTGTGGAGGCTGTTTATGATGGAAGCTTATTTGAACATATGGAGAGAGAGAAGAAGACAGCATTACAAATTAAGAAATGA 585 43.76 MAELSNLSSSPSQETPNVLQKHVAFFDRNKDGVVYPWETFKGFRAIGANLFLSTVSAVFINVGLSSKTRPGKFPNLLFPIEIKNIQLGKHGSDSGVYDTEGRFVASRFEEIFKKHALTYPDALTEEELKALLKANREPKDYAGWVGAWAEWTTLYSLCKDENGLLTKKTVEAVYDGSLFEHMEREKKTALQIKK 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 66891531 66906765 + Hsped.01g05880.1 Hepe01g0588 559698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0588 194 Pfam Caleosin related protein 17 182 IPR007736 -
Hepe01g0588 194 PANTHER PEROXYGENASE 3-RELATED 11 187 IPR007736 GO:0004497(PANTHER)|GO:0005509(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0573 Hepe-Chr1:66408163 Hepe01g0588 Hepe-Chr1:66891531 1.68e-120 dispersed
Hepe01g0588 Hepe-Chr1:66891531 Hepe03g0310 Hepe-Chr3:4277812 1.63e-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0588 K17991 - csv:101213829 318.546