Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g0623 | ATGGGGGAGGCCCAGAAATTAAAGAGAGAATACACAATTGTTGCAGGCCCATTATACACGTACTCGACAGGGAGTCGGCAGCATCTGTACGCCAACAAGGTGGATCTGGTGAAGGATTTGAGCCTCTCCAACAATCTCCATTTGGGCAAACCTTTCTATGTAACGAAGAAGCTCGCGCCGATTCTCGGCCACAGCGTCGTCAGATCCAACGGCGCGGTTTGGGCGCTGCAGCGTAAGATCATCGCGCCGGAGTTCTTCATGGACCGTGTCCGGGCCATGGCGGCGATGATGCCGGAGGCGGCGGCGACGCTACTGGAGAAATGGGAAGGGAGGATCGGAGAGGGAGAGGGAGCGACGGCGGAGATTGACGTGGATGAGGATCTGAGAGGATTCTCGGCGGATGTGATTTCTAGGGCTTGCTTTGGGAGCTCGTATGTGAAGGGGAAGGAGATTTTTTCTAAGCTTAGGGATCTTCAGAAGTTGCTTAGCGAGGAGAGTTTTCTATTTGGCCATAGTTCTTTCAGTGACAGATTTTTTCAACCAAGCAAACACAGAAGAATAAAAAAGTTGGAGAAGGAGATCGAGTCATTAATATGGGAGACAGTTCAACAACGACAAAAAGAATGCTCCAAAACGTCGTCGTTGGAGAAGGATTTGTTGCAGCTGATAATGGAGGGCGCCATGAATGACCCAAGTGTAGGTGCCTGCAATGAGTCCTCAAAAAACTTCATCGTCGATAACTGCAAGAGCATCTACTTTGCCGGCCATGAGTCCACTGCCGTTGCTGCTACCTGGTCCTTGATGCTCCTCGCCCTCCACCCCGAATGGCAACACCGCATCCGCTCCGAGTTCGCTCAAGCTTGCCCCGACGGTCGCCCCGATACGACCGCGATCTCTCACCTCAAATCGGTGAGTATGGTGGTTCAAGAAACACTACGACTGTACCCGCCCGCAGCATTCGTAGCAAGGGAGACATTTGCCGAGACGCGGTTGGGGAATGTGGTGGTTCCGAAGGGCGTATGCTTATGGACTTTGATTCCGACGCTGCATAGAGAAGTCGAAATATGGGGAGAAGATGCGAATGAGTTCAAGCCAGAGCGGTTCGCGAATGGCATAGCGAAGGCCTGCAAGTTCCCTCAGGCCTACGTGCCATTCGGGGCAGGTCCTCGACTATGCTTAGGGAAGAACTTCGCATTGGTTCAGTTGAAGATCATCATTTCTCTTGTAGTTTCCAAGTTTAAATTTTCACTGTCTCCTGAGTATCGCCATTCTCCTTCTTATAGAATGATTGTGGAGCCTGCCGATGGGGTGAAGATTGTCTTCCAAAGGCTTTGA | 1335 | 51.46 | MGEAQKLKREYTIVAGPLYTYSTGSRQHLYANKVDLVKDLSLSNNLHLGKPFYVTKKLAPILGHSVVRSNGAVWALQRKIIAPEFFMDRVRAMAAMMPEAAATLLEKWEGRIGEGEGATAEIDVDEDLRGFSADVISRACFGSSYVKGKEIFSKLRDLQKLLSEESFLFGHSSFSDRFFQPSKHRRIKKLEKEIESLIWETVQQRQKECSKTSSLEKDLLQLIMEGAMNDPSVGACNESSKNFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQHRIRSEFAQACPDGRPDTTAISHLKSVSMVVQETLRLYPPAAFVARETFAETRLGNVVVPKGVCLWTLIPTLHREVEIWGEDANEFKPERFANGIAKACKFPQAYVPFGAGPRLCLGKNFALVQLKIIISLVVSKFKFSLSPEYRHSPSYRMIVEPADGVKIVFQRL | 444 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 67908073 | 67913544 | + | Hsped.01g06230.1 | Hepe01g0623 | 559733 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g0623 | 444 | Coils | Coil | 187 | 207 | - | - | |
| Hepe01g0623 | 444 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 385 | 394 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe01g0623 | 444 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 17 | 434 | IPR050665 | GO:0004497(PANTHER) | |
| Hepe01g0623 | 444 | PRINTS | E-class P450 group I signature | 243 | 260 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | E-class P450 group I signature | 392 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | E-class P450 group I signature | 382 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | E-class P450 group I signature | 131 | 149 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | E-class P450 group I signature | 263 | 289 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | Gene3D | Cytochrome P450 | 2 | 444 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | P450 superfamily signature | 254 | 271 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | P450 superfamily signature | 306 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | P450 superfamily signature | 383 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | Pfam | Cytochrome P450 | 6 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g0623 | 444 | SUPERFAMILY | Cytochrome P450 | 14 | 442 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0623 | Hepe-Chr1:67908073 | Hepe02g0978 | Hepe-Chr2:11869814 | 2.68e-89 | dispersed | |
| Hepe03g0370 | Hepe-Chr3:5263724 | Hepe01g0623 | Hepe-Chr1:67908073 | 2.10e-133 | transposed | |
| Hepe03g0392 | Hepe-Chr3:5625874 | Hepe01g0623 | Hepe-Chr1:67908073 | 1.63e-142 | transposed | |
| Hepe01g0623 | Hepe-Chr1:67908073 | Hepe02g3261 | Hepe-Chr2:82220943 | 7.58e-90 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g0623 | K20661 | - | csv:101216582 | 739.569 |