Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0637 ATGGCTTCTTCTTCTTCTTCTTCAATCAAATGGGTCTCTGAAAATGGCTTCCAACCCCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAAAAATTGCTCAAAAACTCCTCTTGTAAAGTAACGACTGCAGAAAATGGTCGAAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGATCATCAACACAGCAACTTAGAATGCACCACTAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCTGGATACGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAATTCCTGTGGTGATTGTATCATCGGAGAATGTGCCCACTCGTATCAACAAGTGTTTGGAGGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAGCAATCTGATATGGTGAAACTCAAGTGCCAGTTGATGAACTAA 456 40.13 MASSSSSSIKWVSENGFQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHSNLECTTRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEIPVVIVSSENVPTRINKCLEEGAEMFMLKPLKQSDMVKLKCQLMN 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68251939 68254592 - Hsped.01g06370.1 Hepe01g0637 559747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0637 151 SUPERFAMILY CheY-like 19 145 IPR011006 -
Hepe01g0637 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 145 IPR045279 GO:0009736(InterPro)
Hepe01g0637 151 CDD REC_typeA_ARR 21 145 - -
Hepe01g0637 151 ProSiteProfiles Response regulatory domain profile. 20 150 IPR001789 GO:0000160(InterPro)
Hepe01g0637 151 SMART REC_2 19 146 IPR001789 GO:0000160(InterPro)
Hepe01g0637 151 Gene3D - 15 151 - -
Hepe01g0637 151 Pfam Response regulator receiver domain 21 144 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0637 Hepe-Chr1:68251939 Hepe02g2525 Hepe-Chr2:71971938 8.91e-50 dispersed
Hepe01g0637 Hepe-Chr1:68251939 Hepe05g0710 Hepe-Chr5:12677465 9.55e-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54769 PF00072 Response_reg 2.60E-22 CL0304 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0637 K14492 - csv:101208898 254.603