Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g0637 | ATGGCTTCTTCTTCTTCTTCTTCAATCAAATGGGTCTCTGAAAATGGCTTCCAACCCCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAAAAATTGCTCAAAAACTCCTCTTGTAAAGTAACGACTGCAGAAAATGGTCGAAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGATCATCAACACAGCAACTTAGAATGCACCACTAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCTGGATACGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAATTCCTGTGGTGATTGTATCATCGGAGAATGTGCCCACTCGTATCAACAAGTGTTTGGAGGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAGCAATCTGATATGGTGAAACTCAAGTGCCAGTTGATGAACTAA | 456 | 40.13 | MASSSSSSIKWVSENGFQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHSNLECTTRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEIPVVIVSSENVPTRINKCLEEGAEMFMLKPLKQSDMVKLKCQLMN | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 68251939 | 68254592 | - | Hsped.01g06370.1 | Hepe01g0637 | 559747 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g0637 | 151 | SUPERFAMILY | CheY-like | 19 | 145 | IPR011006 | - | |
Hepe01g0637 | 151 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 19 | 145 | IPR045279 | GO:0009736(InterPro) | |
Hepe01g0637 | 151 | CDD | REC_typeA_ARR | 21 | 145 | - | - | |
Hepe01g0637 | 151 | ProSiteProfiles | Response regulatory domain profile. | 20 | 150 | IPR001789 | GO:0000160(InterPro) | |
Hepe01g0637 | 151 | SMART | REC_2 | 19 | 146 | IPR001789 | GO:0000160(InterPro) | |
Hepe01g0637 | 151 | Gene3D | - | 15 | 151 | - | - | |
Hepe01g0637 | 151 | Pfam | Response regulator receiver domain | 21 | 144 | IPR001789 | GO:0000160(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0637 | Hepe-Chr1:68251939 | Hepe02g2525 | Hepe-Chr2:71971938 | 8.91e-50 | dispersed | |
Hepe01g0637 | Hepe-Chr1:68251939 | Hepe05g0710 | Hepe-Chr5:12677465 | 9.55e-52 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54769 | PF00072 | Response_reg | 2.60E-22 | CL0304 | Hepe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g0637 | K14492 | - | csv:101208898 | 254.603 |