Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0640 ATGCGAACATTGTTGAAGATGAAACGCCTGATTGAGCTCTTCGTCTTGTTCGTTTTTGCTCCACTCTGTGCTAGATGTGTTAACCTATCTTTAAACGACGACGTTTTGGGCCTGATTGTGTTTAAAGCTGCCGTTCAAGATCCGAAGAAGAACCTCGCGACTTGGGACGAAGATGACGATAGTCCCTGCAACTGGAATGGTGTTAAATGCAGTGCTAGATCCAACCGGGTTGTTGAGCTCAACCTCGAGGGATTCTCTCTCTCCGGTCGGGTCGGCCGGGGGCTTTTCCAGTTGGAGTTTCTGCAGAGATTGTTGCTCTCGAAGAACAATCTCAGTGGAAATATAAGCCCCAATTTCGCTCGAGTTGATAATCTTCAGGTGATTGATTTGAGTTGGAATAATTTCTCAGGTTCTGTTCCGGATGATTTTTTTCGTCAATGTAGGTCTTTGAGAGTTGTTTCCTTGGCCAACAACAAATTTTCTGGGAAAATTCCTGATAGTTTGAGCTTTTGTGGGAGTCTTATTGCTGTTAACTTGTCCTCGAATCAGTTTTCGGGTCCTTTGCCTTCTGGGATTTGGTCTCTCAGTGGGATTCGATCATTGGACTTGTCTGATAATGCTTTGGTGGGTGAAATTCCGAAGGTAGTTGAGAATTTGTATAGTCTGCGGACTCTTAACTTGAGGAAGAATCGATTTTCTGGACAGATTCCTGATGGAATTGGGAGCTGTTTGCTTCTGAGGTTCATTGATCTTAGTGAGAATTCATTTTCTGGGAATCTTCCTCAGACCATGAAGAAACTTGTTTTGTGTAGTAATCTGATTTTAAGCAGGAATTTGTTCGAAGGAGATGTTCCAGAGTGGATTGGAGAAATGAAAAGCCTTGAAACTCTGGACTTTTCTGGGAACAATTTTACTGGCCATATTCCAACTACAATGGAGAATCTTCAATATCTAAAAGTATTGAATCTCTCTTCAAATGGCTTTACTGATAACTTTCCAGAGTCTGTGATGAAATGCCAAAGTCTTTTGGTTGTAGATTTCAGTCATAATTCGATCATGGGTAATCTACCTGCGATCGGAAGTTTAGGCGAGCTGCAGTTTCTGAACCTGTCTGGGAATTCTTTTGTTGGTCCTATTCCAGAAACCATTGGAGAACTGAAAGCTTTGAGCATTCTTGATTTGAGCAGGAATCGGCTGAACGAAAGCATTCCGGACTCAATTGGAGGAGCTGTGTCCCTAATTGAGCTGAAGCTGGATGAAAATCTTCTAGGGGGTGAAATTCCCTCTACAATTGATCATTGTTCTTCCCTTACAACCTTGTTCATATCACACAATAACCTAACTGGGCCGATACCAGTGGCGTTGGCTAAACTCTCTTATCTCCAAAATGTTGACTTATCCTTTAACAATCTCAATGGAACCCTTCCAAAGAACTTGTCTAATCTTCCAAACCTTCTTGTGTTCAATATTTCTCACAACAACCTCAAGGGTGAGCTGCCTGCTGGTGTATTCTTTAACACCATCTCCCCTTCATCCGTTGCTGACAATCCGTCCCTCTGTGGCTCTGTTGTTAATAAGTCTTGCCCTTCTGTCCTTCCAAAACCTATTGTTCTTGATCCCAACTCCACCTCAGATTCCATTTACAGCTCACTGCCTCCGAGTAATAATCACAGAAGAAATAGAAATATCCTCAGTATTTCTGCACTGGTTGCCATCGGTGCCGCTGCTTTCATCATCGTTGGTGTAATATCGATCACCATCCTCAACCTTCGTGTTCAACCACCCACGTCGTCTTCGTCTGCAGCTGCACTTGCATTATCTATGGGGGATGATTTCAGTCATTCCTCCAGTCCCGATGCGAATTCTGGAAAGCTTGTGGTGTTATCAGGAGAGCTTGACTTTAGCACAGGAGCACATGCCTTGCTGAACAAGGATTGTGAGCTTGGGCGTGGTGGGTTCGGAGCAGTTTATCATACTGTTCTGCGGGACGGACACTCAGTTGCAATCAAGAAGCTTACAGTTTCTAGCCTTGTGAAGTCCCAAGAGGATTTTGAGAGGGAAGTTAGAAAGTTTGGGAATGTCAGGCACCAAAATCTCGTGGCACTCGAAGGTTATTATTGGACTCCCTCCCTACAGCTCCTCATATATGAATTTGTCTCTGGAGGTAGCTTGTATGGGCTGCTACACGAAGCATCAGATGACAATAGCCTGTCATGGAATGAGAGATTCGATATAATTCTCGGGACGGCGAAAGGTCTGGCTCAATTGCATCAATCAAACACAATCCACTATAACATAAAATCCAGCAACATCCTTATTGATTGCAATGGTCAACCTAAGGTGGGAGATTATGGTCTAGCAAGATTACTGCCAATGTTAGACCGTTATGTTCTAAGTAGCAAGATCCAGAGCGCACTCGGTTACATGGCACCAGAGTTTGCTTGCAGAACAGTGAAGATAACCGAAAAATGCGACGTGTACGGGTTCGGGATCTTGATTCTAGAGGTAGTCACAGGGAAGAGACCTGTCGAGTACATGGAAGACGACGTAGCAGTCCTCTGCGACATGGTCAGAGGAGCAGTGGAAGAAGGAAGAGCCGAAGAATGCATCGACAGGAAGCTGAGGGGGAATTTCCCAGCCGAAGAGGCCGTTCCCGTATTAAAATTAGGCTTGATCTGCACCTCTCACGTGCCATCAAATCGGCCCGACATGAGAGAAATGGTCAAGATATTGGAAATGATCAAATGCCCATCCGAATTACAAGACGAGTTGGGATAA 2778 44.31 MRTLLKMKRLIELFVLFVFAPLCARCVNLSLNDDVLGLIVFKAAVQDPKKNLATWDEDDDSPCNWNGVKCSARSNRVVELNLEGFSLSGRVGRGLFQLEFLQRLLLSKNNLSGNISPNFARVDNLQVIDLSWNNFSGSVPDDFFRQCRSLRVVSLANNKFSGKIPDSLSFCGSLIAVNLSSNQFSGPLPSGIWSLSGIRSLDLSDNALVGEIPKVVENLYSLRTLNLRKNRFSGQIPDGIGSCLLLRFIDLSENSFSGNLPQTMKKLVLCSNLILSRNLFEGDVPEWIGEMKSLETLDFSGNNFTGHIPTTMENLQYLKVLNLSSNGFTDNFPESVMKCQSLLVVDFSHNSIMGNLPAIGSLGELQFLNLSGNSFVGPIPETIGELKALSILDLSRNRLNESIPDSIGGAVSLIELKLDENLLGGEIPSTIDHCSSLTTLFISHNNLTGPIPVALAKLSYLQNVDLSFNNLNGTLPKNLSNLPNLLVFNISHNNLKGELPAGVFFNTISPSSVADNPSLCGSVVNKSCPSVLPKPIVLDPNSTSDSIYSSLPPSNNHRRNRNILSISALVAIGAAAFIIVGVISITILNLRVQPPTSSSSAAALALSMGDDFSHSSSPDANSGKLVVLSGELDFSTGAHALLNKDCELGRGGFGAVYHTVLRDGHSVAIKKLTVSSLVKSQEDFEREVRKFGNVRHQNLVALEGYYWTPSLQLLIYEFVSGGSLYGLLHEASDDNSLSWNERFDIILGTAKGLAQLHQSNTIHYNIKSSNILIDCNGQPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEVVTGKRPVEYMEDDVAVLCDMVRGAVEEGRAEECIDRKLRGNFPAEEAVPVLKLGLICTSHVPSNRPDMREMVKILEMIKCPSELQDELG 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68305799 68310848 + Hsped.01g06400.1 Hepe01g0640 559750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0640 925 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 719 920 - -
Hepe01g0640 925 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 636 718 - -
Hepe01g0640 925 Gene3D Ribonuclease Inhibitor 270 531 IPR032675 -
Hepe01g0640 925 SUPERFAMILY Protein kinase-like (PK-like) 646 912 IPR011009 -
Hepe01g0640 925 Gene3D Ribonuclease Inhibitor 193 269 IPR032675 -
Hepe01g0640 925 SUPERFAMILY RNI-like 79 400 - -
Hepe01g0640 925 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 97 916 IPR050647 -
Hepe01g0640 925 ProSitePatterns Protein kinases ATP-binding region signature. 648 671 IPR017441 GO:0005524(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 389 409 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 461 482 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 198 219 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 365 386 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 436 458 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Protein tyrosine and serine/threonine kinase 644 910 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g0640 925 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Hepe01g0640 925 SUPERFAMILY L domain-like 360 501 - -
Hepe01g0640 925 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 32 310 - -
Hepe01g0640 925 ProSiteProfiles Protein kinase domain profile. 642 914 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0640 925 Gene3D Transferase(Phosphotransferase) domain 1 719 923 - -
Hepe01g0640 925 SMART LRR_typ_2 482 506 IPR003591 -
Hepe01g0640 925 SMART LRR_typ_2 386 410 IPR003591 -
Hepe01g0640 925 SMART LRR_typ_2 219 243 IPR003591 -
Hepe01g0640 925 SMART LRR_typ_2 122 146 IPR003591 -
Hepe01g0640 925 SMART LRR_typ_2 291 315 IPR003591 -
Hepe01g0640 925 Gene3D Phosphorylase Kinase; domain 1 631 718 - -
Hepe01g0640 925 Pfam Leucine rich repeat 272 327 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515(InterPro)
Hepe01g0640 925 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 357 531 - -
Hepe01g0640 925 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0640 Hepe-Chr1:68305799 Hepe05g0019 Hepe-Chr5:232394 3.14e-181 dispersed
Hepe01g0640 Hepe-Chr1:68305799 Hepe02g3275 Hepe-Chr2:82360636 3.47e-233 wgd
Hepe01g0640 Hepe-Chr1:68305799 Hepe02g2585 Hepe-Chr2:72924301 3.18e-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72444 PF07714 PK_Tyr_Ser-Thr 2.90E-40 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0640 - - - 0.0