Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0642 ATGTCCTCCGAAGACATGAACGCGCTCAACTCCCACCTCGTCTTCCCAGACGAAGCCATACCCTTCAATTGCGCCGCCACCCCGCACCGCCGCGTCGCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTTTTGGATGACAAGCTCTTCCCTGTCGACCGAGACCGATTCTTCGCTCACCAGGGCGCCACCGATTTCCGCCGGAGTGTGTTCAGTGACAGCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGGAAAGGATCGGATGAGGATGATGATGATGATGATGAAGAGGAGGATGATGATGATGAAGTCGATGATGGCGATGATGATGTTGAAGGGCTTGTCTCTTTGGATGATGTTAATAAGTGCGGTAAAATTTCTAACCCCAACAACAGCAACAATGATAGAAGCGATCAGAGTAGTGGGGGTTTGAAGAATGGGATGAACAAATTGGGAAATGGGAAGCCTAAGCACCATTCTTCTTTTGGTGGAACTTTGTTGGTCAAGGATGGGATGGTTGGGCCTTCAGGGAGTAACACAGGAGCAAATCAGAGTGAGAGCCATTTGCAGGGAAGGTTGGGGAATTACCCAAATGCTGTTACAATTGCAGAAGTTGAAGGTGATGCTTATTATTCACAGTATTTGCAAGGCACTGAGGGGTCTGGTTCTGGGCAGAAGGATCAATTTGCTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGGTTACGGGCGAGCCTGGAGAGTCTCTGAGAGCTATTCTCACAGACCCTGTGACGGGCGCTCTCATGGATGATGCGATGATATTACCATGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCGTGTTCTCAGTCAATTTCTGAAGAGTCTATTGCTCCAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTATTATTTTACCGCTCACCAAAAAGGAGAAGGGAAAGATTTGAGCAGGACAAGGATGGTTATGGTGATTTGACTCTCATGGATACTCCAAGAGGTCGAGGCGTTCAGTTTCCTTTCGCAGTGACAGATCGGGTAATTATCAAGGGGAACAAGAGGACACCGCAGCGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAACGCAGAGAGTGTAAAGTTGCAGTACCGCTCGCTTGCGAAGGTTCCGAACGACGCAGCATCAAAAACAATAATAAGGAAGATCGCACCGAATTGGCTTTAG 1317 48.29 MSSEDMNALNSHLVFPDEAIPFNCAATPHRRVADPGPKTRELCGFLDDKLFPVDRDRFFAHQGATDFRRSVFSDSRNWNGNGTARTGSGKGSDEDDDDDDEEEDDDDEVDDGDDDVEGLVSLDDVNKCGKISNPNNSNNDRSDQSSGGLKNGMNKLGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQSESHLQGRLGNYPNAVTIAEVEGDAYYSQYLQGTEGSGSGQKDQFAMENGCGFGRRDVSVTGEPGESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSISEESIAPNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKDGYGDLTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTIIRKIAPNWL 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68330505 68335151 + Hsped.01g06420.1 Hepe01g0642 559752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0642 438 MobiDBLite consensus disorder prediction 72 197 - -
Hepe01g0642 438 ProSiteProfiles U-box domain profile. 256 328 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe01g0642 438 MobiDBLite consensus disorder prediction 93 119 - -
Hepe01g0642 438 SUPERFAMILY RING/U-box 256 328 - -
Hepe01g0642 438 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 12 424 - -
Hepe01g0642 438 MobiDBLite consensus disorder prediction 72 88 - -
Hepe01g0642 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 327 IPR013083 -
Hepe01g0642 438 MobiDBLite consensus disorder prediction 181 197 - -
Hepe01g0642 438 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0360 Hepe-Chr1:53473717 Hepe01g0642 Hepe-Chr1:68330505 2.65e-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0642 - - - 0.0