Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0646 ATGGAAATCCCCAATCCCTCCATTCCAATGGCTTCCTCTTCCAATCCCTCCGCCCCTTTCCGCTCTTCCTTCCACCGCCGTGCTCATTCCGAGGTCCATTTCCGGATTCCCGATGATCTCGATCTCGTCTCCGACCCTTTCGACGGACCCTCTTCTGGATTTGGAGATCTCGGCTTCGAGGATGATCTTTTGTGCTCCTTTATGGACTTTGAGAAGATCGGATCCAAAATCGATAATGGGTCCTCCTCGAAATCTGATGCGGCGGAGAATGTCGATGGCGAGAAAATCTCCCGCCCCAGGCACCGCCATAGCAATTCTGCTGATGGGTCTTCGATTATGGAGTCTATTGAGGCGAAGAAGGCTATGGATCCTGATAAGCTTGCTGAGTTGTGGACTATTGATCCTAAGCGCGCCAAGAGGATTTTGGCAAATAGACAGTCGGCTGCTCGATCAAAAGAGAGGAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCGACAACTCTTTCTGCACAGCTCACGTTGTACCAGAGAGATACCACAGGGCTTTCATCCGAAAACACAGATCTCAAACTTCGCTTACAAGCTATGGAACAACAAGCTCATTTACGTGACGCTCTAAATGATGCATTGAAGAAGGAAGTCGAGCGGCTCAAGGTCGCGACTGGAGAAGTAATGACAGCTACAGATTCGTATAACTTTGGAATGCCTCAAGTTTCCTATCCCCAATCTTGCTTTTCGCACCAACCACAACCTGGGCGACACAACCCGCAGTGGACGGCGCAAAGGCCCCAAGTTGTTCATCCATTCCATTCTAACCCGCATCAGGCTCTGTATGTTGCATCCCACCAGCCACATGCCTTGACAGAAATGTTTCAGCAGGATCCTATTAGCCGATTGCAGGGTCTCGATATCGGTAGCAGAGGCGCACAAATAAAGCCAGAAGGCTCGTCTATATCCGTCAGTGAAAGTAGCAGCACATTTTAA 1008 49.4 MEIPNPSIPMASSSNPSAPFRSSFHRRAHSEVHFRIPDDLDLVSDPFDGPSSGFGDLGFEDDLLCSFMDFEKIGSKIDNGSSSKSDAAENVDGEKISRPRHRHSNSADGSSIMESIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIMELERKVQSLQTEATTLSAQLTLYQRDTTGLSSENTDLKLRLQAMEQQAHLRDALNDALKKEVERLKVATGEVMTATDSYNFGMPQVSYPQSCFSHQPQPGRHNPQWTAQRPQVVHPFHSNPHQALYVASHQPHALTEMFQQDPISRLQGLDIGSRGAQIKPEGSSISVSESSSTF 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68392417 68399131 + Hsped.01g06460.1 Hepe01g0646 559756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0646 335 MobiDBLite consensus disorder prediction 315 335 - -
Hepe01g0646 335 MobiDBLite consensus disorder prediction 7 21 - -
Hepe01g0646 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 134 197 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0646 335 CDD bZIP_plant_RF2 137 186 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0646 335 Pfam bZIP transcription factor 136 194 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0646 335 MobiDBLite consensus disorder prediction 78 109 - -
Hepe01g0646 335 SUPERFAMILY Leucine zipper domain 136 187 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0646 335 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 298 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe01g0646 335 Coils Coil 152 179 - -
Hepe01g0646 335 MobiDBLite consensus disorder prediction 1 22 - -
Hepe01g0646 335 FunFam probable transcription factor PosF21 135 188 - -
Hepe01g0646 335 Gene3D - 135 229 - -
Hepe01g0646 335 MobiDBLite consensus disorder prediction 320 335 - -
Hepe01g0646 335 SMART brlzneu 132 196 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0646 335 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0646 Hepe-Chr1:68392417 Hepe08g0680 Hepe-Chr8:6113069 7.33e-82 dispersed
Hepe01g0646 Hepe-Chr1:68392417 Hepe10g1387 Hepe-Chr10:50227677 2.86e-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54770 PF00170 bZIP_1 8.60E-09 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0646 - - - 0.0