Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0652 ATGGATCTTGAACAGGGGAAGTGTTGGGATACTTCAAAGAAGGGTTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGAGTTGTCTATGGCGATTTGAGTATCTCTCCTCTCTACGTTTACAGAAGCACTTTTGCTGAAGACATTCAACATTCTGATACCAATGAAGAAATCTATGGTGTTCTTTCGTTTGTCTTCTGGACTCTTACTATTGTCCCCCTTTTCAAATACGTCTTTGTGGTTCTCAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCATTAATTTGCAGACATGCCAAAGTGAGCCTTCTCCCCAACAGACAAGTTGCAGATGAAGCACTTTCCACTTATTTGTTGGAACCTTCACCAGAGAAGAAGAAGCAATCTAAGGTTAAATCGCTGCTGGAGAAGCATAGGGCTCTTCACACTGCCTTGTTGATTCTTGTTCTTCTAGGGACTTGTATGGTGATTGGAGATGGACTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGAACAAGGCTCACCATCAATATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTCGGCTTCGTCTTTGCTCCCATTGTATTGACATGGCTACTCTGCATCAGTACTCTTGGTCTATACAATATTATACACTGGAATCCACATGTTTATCAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGCGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTTACCTTTCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCAGCAATAACATTGGCTTCTATGTTTCTGTTCCAGAGAGTGTGAGATGGCCGGTTCTTACGATCGCTATACTTGCTTCGGTTGTCGGAAGCCAAGCAATCATCAGTGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAGAGTGAAGGTTGTTCATACCTCTGATAAGATCCATGGCCAGATCTACATTCCGGAGATCAATTGGATTCTTATGATTCTCTGTGTTGCCGTTACCATTGGATTTAGAGACATAAAACACCTCGGAAATGCATCAGGTCTAGCTGTAATGACTGTGATGCTTGTGACAACCTGCCTTACTGCTTTGGTGATTGTCCTGTATTGGAACAAATCACCTCTTTTGGCTCTGGCCTTTTTGGTCTTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAAGGCGCTTGGCTCCCCATTCTTTTAGCTCTTTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTTCATAACAAGGTTTCATTAGAATGGCTGCTAGCATTGGGTCCAAGCCTCGGAATTGCTCGCGTCCCCGGCATTGGATTAGTCTTCACAGATCTTACCTCTGGCATCCCTGCCAACTTCTCCCGCTTTGTTACTAACCTCCCGGCATTTCATCGAATCCTTGTCTTTGTGTGTATAAAGTCGGTACCGGTTCCTTTTGTACCTCCTGCCGAGCGGTATCTCGTCGGACGAGTAGGCCCGGCCACGCATCGGTCATACCGGTGCATTGTTCGATATGGCTACCGTGATGTTCATCAGGATGTGGACTCATTCGAAACTGAATTAATCAAGAAACTGGCAGACTTCATCCGCTACGATTGGTACAGAAAGCAAAGAGGAAACTCTTGCAGCGAGGATGATGCATCCCGTTCAAATGAATCGACAAGCGAGCGCAGGCTAGCTGTGATCGGAACCGTAGCATTCGCAGGCGCATCTGCTTATGAGGAGACCGTGCAGCCTGCGAGCGTATCAGTTGGGTTCCAAACTGTGGAAAGCATCACCGATGTGATCGAAATGGAGCCATTGGGAGAAGAAAGAAGAGTCAGGTTCGCCATAGATGACGATTTCGAAGGTGACTCACAAGCTGAAGCAGAAGCCCTTCTGCACGAAGAGCTAGAAGATCTTGTAGCAGGCCAGCAATCCGGGACGGCGTTCATTCTTGGGCATTCACACGTCCGGGCGAAGCAGGGATCGTCTGTGTTGAAGAGGCTGGCCATTAACTATGGCTACAACTTCCTGAGAAGGAACTGCAGAGGCGCAGACGTTGCTCTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTTGGAATGGTTTATGTTGTATAA 2373 45.85 MDLEQGKCWDTSKKGSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEPSPEKKKQSKVKSLLEKHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMNKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLTWLLCISTLGLYNIIHWNPHVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTSNNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTALVIVLYWNKSPLLALAFLVFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFETELIKKLADFIRYDWYRKQRGNSCSEDDASRSNESTSERRLAVIGTVAFAGASAYEETVQPASVSVGFQTVESITDVIEMEPLGEERRVRFAIDDDFEGDSQAEAEALLHEELEDLVAGQQSGTAFILGHSHVRAKQGSSVLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68632778 68639433 + Hsped.01g06520.1 Hepe01g0652 559762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0652 790 Pfam K+ potassium transporter integral membrane domain 23 515 IPR053951 -
Hepe01g0652 790 Pfam K+ potassium transporter C-terminal domain 527 788 IPR053952 -
Hepe01g0652 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 789 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Hepe01g0652 790 NCBIfam potassium uptake protein 23 789 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0652 Hepe-Chr1:68632778 Hepe02g3114 Hepe-Chr2:80295510 0.0 dispersed
Hepe01g0652 Hepe-Chr1:68632778 Hepe02g1864 Hepe-Chr2:29218984 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0652 K03549 - csv:101211022 1495.33