Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0659 ATGGTAGCTTCTAGCCTCGCTTGTTCTTCATCGCTATTTGCAGTGTTTCCACTTCAAAATAATGCGCTCTACAAATCTATATTACCATTTTCTTCAAATCTTTCAAAACCCCATTTCCGATTCAACAAAATTTGCTGCGGAATGCCTGAGAGTGGAATTCGGCAAAACCCCACAAGTTCCAAGAACAGGATGGAGGAGTACAATTTGGCTATGAAGAAGATGATGAGCAACCCCTATGAGTATCACCATGAATTGGGTATGAACTATACTGTGATAGCTGACAATTTGATTGTCGGTTCCCAGCCTCAAAAACCCGAAGATATCGATTTCTTGAAGGAGGAAGAAGATGTTGCCTATATTCTGAATTTACAGCAGGACAAGGATGTTGAGTACTGGGGAATCGACTTACAATCAATTATAGAAAGATGTAAAGAACTTGGAATTCATCATATGAGGCGACCGGCAAAAGATTTTGATCCAGATTCCTTGAGAAACGGATTGCCTAAAGCTGTTTCCTTGTTAGAATGGGCGATTTCAGAGGGTAAAGGAAAAGTTTACGTGCATTGCACTGCTGGACTCGGAAGGGCCCCCGCTGTTGCAATAGCTTACCTGTACTGGTTTTGTGGAATGAATTTAAATACAGCATATGAAGCACTGACTTCAAAAAGACCTTGTGGACCGAGTAAAAGAGCAATCCAGGGAGCCACTTACGATCTATCTAAAAATGATCCAGGGAAGGAACCATTTGAGAGCCTTTCAGATAATGCATTCGAAGATATTGCAGATTGGGAAAGAAACTTGATTCAGGATCGGATCCGTTCTCTTCGTTCAACTTGA 837 41.34 MVASSLACSSSLFAVFPLQNNALYKSILPFSSNLSKPHFRFNKICCGMPESGIRQNPTSSKNRMEEYNLAMKKMMSNPYEYHHELGMNYTVIADNLIVGSQPQKPEDIDFLKEEEDVAYILNLQQDKDVEYWGIDLQSIIERCKELGIHHMRRPAKDFDPDSLRNGLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYLYWFCGMNLNTAYEALTSKRPCGPSKRAIQGATYDLSKNDPGKEPFESLSDNAFEDIADWERNLIQDRIRSLRST 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68774563 68778107 + Hsped.01g06590.1 Hepe01g0659 559769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0659 278 SMART dsp_5 88 242 IPR020422 GO:0006470(InterPro)
Hepe01g0659 278 Pfam Dual specificity phosphatase, catalytic domain 112 225 IPR000340 GO:0016311(InterPro)
Hepe01g0659 278 CDD DSP_laforin-like 87 234 IPR045204 GO:0019203(InterPro)
Hepe01g0659 278 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 71 278 - -
Hepe01g0659 278 Gene3D Protein tyrosine phosphatase superfamily 71 278 IPR029021 -
Hepe01g0659 278 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 79 228 IPR029021 -
Hepe01g0659 278 ProSiteProfiles Dual specificity protein phosphatase domain profile. 88 245 IPR020422 GO:0006470(InterPro)
Hepe01g0659 278 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 57 247 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Hepe01g0659 278 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 165 224 IPR000387 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0659 Hepe-Chr1:68774563 Hepe01g1069 Hepe-Chr1:75447376 3.94e-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0659 - - - 0.0