Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0674 ATGCTCCATTCCATTCCATTTTCATCTTCTTTGCTGCTCTTTAGCTTTTCCATGGATGAAATCGAAACCCCATTTGATTCCAACTCTTGTTGGAAACACCCACTTGGAGATTTTGGGGGTTTGTTCTGTTCTTCAGGCATAAAGGAGGAGAAATTGCAGATTGTGAGGAATAAACCTAATGGGTTTGTTTCTTCTTCTCTTTGTTTTAGATTGAGTTTGTTGTTTTTGGTGTTTAGTTTGATTTCTATTGGGCCTGTTTTGAGCCAGGATTGGGATGGTGTGGTTGTCACTCAGGCTGATTTTCAATCCCTTCAGGCTTTTAAGCAAGAACTTGGTGATCCTAAAGGGTTTTTGAAGAGTTGGAATGATAGTGGATTTGGGGCTTGTTCTGGTGGTTGGGTTGGGATTAAATGTGCTCAGGGACAGGTTATTGTAATACAGCTTCCATGGAAGGGATTGGGAGGAAGAATCACTGAGAAAATTGGCCAACTTCAGGCTCTTAGGAAGCTTAGTTTACATGACAACTTGATTGGTGGATCAATCCCTTCTTCTTTGGGGATTCTTCCAAATCTTAGAGGGGTTCAGCTGTTTAACAATCGATTTTCGGGTTCGATCCCGGCTTCATTGGGGCTTTGTCCTCTACTTCAAACTCTTCACGTTAGTAACAATTTGCTCACTGGAACAATCCCACCTACCTTGGCTAACTCCACCAAACTCTATTGGCTTAACTTGAGCTACAACTCGTTTTCCGGTCCGATACCGATCGAGCTCTCTCGATCGGTGTCGCTTACTTTCCTTGCTCTTCAACAGAACAATCTCTCCGGCAGCATTCCGGACGCTTGGGGCGGCGGCGCCACCGAGCGAAATCAGGTGTTTCAGCTCAAGTCTCTGACTCTTGATGGCAATCTCCTCTCAGGTACAATACCAACTTCTTTAAGCAAGTTAAGTGAGCTTCAAGTGGTTTCCCTTAGCCACAATAGGTTTAATGGTGGCATTCCAGAAGAAATTAGCAGGCTTTCTTTGCTCAAAACTTTGGATGTTTCTAACAATTTCCTTAATGGAAGTATGCCCCAAAGTTTTGATAGATTGAGAAATCTCTCTGTTCTCAACTTGAGTAGAAACAGATTCAGTGGTCAAATTCCTGAAACTTTAGGGAACATTTCAACACTTACTCAACTTGATTTATCTCAGAACAATCTAAGTGGAGAAATACCAGTTGCTCTTGCTGATTTGCAAGGTCTTCAATCCTTAAATGTCTCATACAACAACCTTTCGGGTTCGGTTCCTTCGGCTCTTGCCGAAAAATTCAATGAAAGTTCCTTTATTGGGAACATTCAGCTATGTGGGTTCAGTGATTCTACTCTGTGCCCGTCCCCGGCTCCTTCTCAAGAAGCTCCTGCTCCTCCACCGGAAAGTTCGACATCCCGACATCGGAAGTTAACTACTAAAGATATAATCCTCATAGCAGCAGGAGCCCTCCTTCTAGTATTGATTATAGTTTTCTTTGTACTGCTCTGCTGCTTGATTAGGAAAAGGGCTGCTTCAAAAGGAAAGGATGGTGGTGGTGAGGCTGCAGCGGCCGGAGCTGCGAGGGCCGAGAAGGGCGTCCCTCCGACTAGCAGTGAAGTTGAAGCGGCGGGAGGGGATGCCGGTGGAAAGCTCGTCCATTTCGAAGGGCAAACGATCTTCACAGCAGATGATCTTTTGTGTGCAACGGCAGAAATAATGGGGAAGAGTACTTATGGGACTGTTTACAAGGCCACATTGGAGGATGGAAATCAAGTTGCAGTTAAGAGATTGAGAGAGAAGATCACAAAGAGCCAGAAGGAATTTGAAGCAGAGGTCAACATACTTGGCAAAATCAGACATCCAAATCTTCTAGCTTTGAGAGCTTACTACATGGGACCTAAAGGAGAAAAGCTTCTCGTTTTCGATTACATGCCGAACGGGAGTCTCGCAGCGTTCCTGCACGCTCGTGGACCAGACACATCCATCGATTGGCCGACGAGGATGAAGATAGCTCAGGGTATGACCCGTGGCCTGTGTCACCTTCACGCGCACGAGACCAGCATCCATGGAAACCTAACATCCAGCAACATTCTACTTGATGAGTACATAAATGCAAAGATTGCAGATTTTGGCCTGTCAAGGTTGATGACTGCAGCTGCAAGCTCAAATGTGATAGCAACTGCAGGGGCACTCGGGTACCGGGCACCAGAGCTCTCGAAGCTGAAGAAAGCGAACACGAAAACCGACATTTACAGCCTTGGAGTGATCATATTGGAACTCCTAACTGGGAAGTCCCCCGGTGAAGCAATGAACGGAGTCGATTTACCACAATGGGTTGCATCCATCGTTAAAGAGGAGTGGACAAATGAAGTTTTCGATTTGGAGTTAATGAGGGATGCATCTACCATTGGAGACGAGTTGCTAAACACTCTGAAACTTGCTTTGCATTGTGTCGATCCTTCACCGTCGGCGAGACCGGAAGTTCAACAAGTTCTGCAACAACTGGAGGAGATTAGGCCAGAAACTGCTCCAAGTTCTGGGGATGATGGAGCAGGAGGAGGAGGAGGAGCCCCTTCAACAAGTGAGTGA 2598 45.8 MLHSIPFSSSLLLFSFSMDEIETPFDSNSCWKHPLGDFGGLFCSSGIKEEKLQIVRNKPNGFVSSSLCFRLSLLFLVFSLISIGPVLSQDWDGVVVTQADFQSLQAFKQELGDPKGFLKSWNDSGFGACSGGWVGIKCAQGQVIVIQLPWKGLGGRITEKIGQLQALRKLSLHDNLIGGSIPSSLGILPNLRGVQLFNNRFSGSIPASLGLCPLLQTLHVSNNLLTGTIPPTLANSTKLYWLNLSYNSFSGPIPIELSRSVSLTFLALQQNNLSGSIPDAWGGGATERNQVFQLKSLTLDGNLLSGTIPTSLSKLSELQVVSLSHNRFNGGIPEEISRLSLLKTLDVSNNFLNGSMPQSFDRLRNLSVLNLSRNRFSGQIPETLGNISTLTQLDLSQNNLSGEIPVALADLQGLQSLNVSYNNLSGSVPSALAEKFNESSFIGNIQLCGFSDSTLCPSPAPSQEAPAPPPESSTSRHRKLTTKDIILIAAGALLLVLIIVFFVLLCCLIRKRAASKGKDGGGEAAAAGAARAEKGVPPTSSEVEAAGGDAGGKLVHFEGQTIFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITKSQKEFEAEVNILGKIRHPNLLALRAYYMGPKGEKLLVFDYMPNGSLAAFLHARGPDTSIDWPTRMKIAQGMTRGLCHLHAHETSIHGNLTSSNILLDEYINAKIADFGLSRLMTAAASSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVIILELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDLELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPETAPSSGDDGAGGGGGAPSTSE 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 68953899 68957018 + Hsped.01g06740.1 Hepe01g0674 559784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0674 865 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 97 280 - -
Hepe01g0674 865 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 282 459 - -
Hepe01g0674 865 Pfam Protein tyrosine and serine/threonine kinase 573 838 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g0674 865 SUPERFAMILY Protein kinase-like (PK-like) 574 842 IPR011009 -
Hepe01g0674 865 Gene3D Ribonuclease Inhibitor 292 459 IPR032675 -
Hepe01g0674 865 FunFam Leucine-rich repeat receptor-like protein kinase 557 646 - -
Hepe01g0674 865 MobiDBLite consensus disorder prediction 840 865 - -
Hepe01g0674 865 Gene3D Transferase(Phosphotransferase) domain 1 648 851 - -
Hepe01g0674 865 MobiDBLite consensus disorder prediction 457 477 - -
Hepe01g0674 865 Pfam Leucine rich repeat 364 424 IPR001611 GO:0005515(InterPro)
Hepe01g0674 865 Pfam Leucine rich repeat 293 350 IPR001611 GO:0005515(InterPro)
Hepe01g0674 865 SMART LRR_typ_2 315 338 IPR003591 -
Hepe01g0674 865 SMART LRR_typ_2 363 387 IPR003591 -
Hepe01g0674 865 SMART LRR_typ_2 339 362 IPR003591 -
Hepe01g0674 865 SMART LRR_typ_2 164 188 IPR003591 -
Hepe01g0674 865 SMART LRR_typ_2 411 434 IPR003591 -
Hepe01g0674 865 SUPERFAMILY L domain-like 137 432 - -
Hepe01g0674 865 CDD STKc_IRAK 576 841 - -
Hepe01g0674 865 ProSiteProfiles Protein kinase domain profile. 570 841 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0674 865 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 85 852 IPR052451 -
Hepe01g0674 865 FunFam Pollen receptor-like kinase 1 647 851 - -
Hepe01g0674 865 Gene3D Ribonuclease Inhibitor 99 212 IPR032675 -
Hepe01g0674 865 Gene3D Ribonuclease Inhibitor 213 291 IPR032675 -
Hepe01g0674 865 Gene3D Phosphorylase Kinase; domain 1 576 647 - -
Hepe01g0674 865 Pfam Leucine rich repeat N-terminal domain 99 138 IPR013210 -
Hepe01g0674 865 Pfam Leucine Rich Repeat 167 186 IPR001611 GO:0005515(InterPro)
Hepe01g0674 865 Pfam Leucine Rich Repeat 215 235 IPR001611 GO:0005515(InterPro)
Hepe01g0674 865 Pfam Leucine Rich Repeat 239 258 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0674 Hepe-Chr1:68953899 Hepe01g1171 Hepe-Chr1:76864514 2.20e-78 dispersed
Hepe06g1388 Hepe-Chr6:64090344 Hepe01g0674 Hepe-Chr1:68953899 6.87e-44 dispersed
Hepe10g1872 Hepe-Chr10:55530981 Hepe01g0674 Hepe-Chr1:68953899 3.39e-42 dispersed
Hepe03g1264 Hepe-Chr3:67892043 Hepe01g0674 Hepe-Chr1:68953899 6.62e-71 transposed
Hepe01g0674 Hepe-Chr1:68953899 Hepe05g0055 Hepe-Chr5:571051 2.45e-172 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72445 PF07714 PK_Tyr_Ser-Thr 1.00E-40 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0674 - - - 0.0