Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0707 ATGTGCGCAGTTGCAGTACCACCGAACACGATGACTCCATTATTCTCATCTCCAAAGATCGCTTCACTTCTCTACAACTCTTCTCTCAATTGTTCTTCTTCTTCGCCGAGATCGGTTTCAAGTCCGCGGAAGCTTCATGCTTCTCCGTCTTCTCCACCGCCGCAACTTCCGCCATTGGCTGTCGATACGGTTTTGAAGAGGAAGAGGCCGACGAGGATCGATGTTCCGTCGTCGTCGTCGTCGATCGGTTTCGGATTTGGATTTAAGACAGAACCGGATGTGATGGAGGAGGAAGGGGAAGGATATTCGGTTTATTGTAAAAGAGGAAGAAGACGCAGCGCTATCGAGGATCGATTCTCAGCAACCGTTGGAATTCAAGGAGATTCTCGCCAGGCATTCTTCGGAGTTTTCGACGGGCACGGCGGAGCAAAAGTGGCGGAAATCGCAGCGAAGAGAATGAGTGAGAACGTAATCGAACAAGTAACGAGAAGAACCGAATCGGAACTCGAGGAAGCAATCAAAGACGGCTATCTTAACACCGATCGGGAAGTATCGGAGGAAGGCGTTAGCGGCGGCGCCTGTTGCGTCGCTGCATTGATACGAAACGGAAACCTCGCGGTCTCGAACGTCGGCGATTGTCGCGCTGTGTTGAGCCGAAGGGGAAAAGCAGAAGCCCTAACTTCCGATCACCGGCCGTGCAGAGAAGACGAGAGAAATCGGATCGAAAATTCGGGAGGTTATGTAGATTGTTGCCGTGGTGCTTGGAGAGTTCAAGGAACGCTGGCTGTATCGCGAGCCATTGGAGATGAGCATCTGAAACAGTGGGTGATTTCGGAGCCGGAGACGAGAGTGATGAAGATCGAGGATGATTGTGATTTCTTGATCCTTGCTTCTGATGGTCTTTGGGACAAGGTGACGAATCAGGAAGCAGTAGACATAGTAGAAGCAGTGCGCGGAGTAGATAAGGAGAAGGCAAAGCTATTCTCAGCCTGCAAAGAGCTGGCGGCCTTGTCAACATCAAGAGGCTCAGTCGATGATACCAGTGTTATGATCATCAACTTCCCTTCATTTCTCTAA 1077 50.6 MCAVAVPPNTMTPLFSSPKIASLLYNSSLNCSSSSPRSVSSPRKLHASPSSPPPQLPPLAVDTVLKRKRPTRIDVPSSSSSIGFGFGFKTEPDVMEEEGEGYSVYCKRGRRRSAIEDRFSATVGIQGDSRQAFFGVFDGHGGAKVAEIAAKRMSENVIEQVTRRTESELEEAIKDGYLNTDREVSEEGVSGGACCVAALIRNGNLAVSNVGDCRAVLSRRGKAEALTSDHRPCREDERNRIENSGGYVDCCRGAWRVQGTLAVSRAIGDEHLKQWVISEPETRVMKIEDDCDFLILASDGLWDKVTNQEAVDIVEAVRGVDKEKAKLFSACKELAALSTSRGSVDDTSVMIINFPSFL 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 69556491 69558958 - Hsped.01g07070.1 Hepe01g0707 559817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0707 358 Gene3D - 98 356 IPR036457 -
Hepe01g0707 358 SMART PP2C_4 92 352 IPR001932 -
Hepe01g0707 358 FunFam probable protein phosphatase 2C 25 94 357 - -
Hepe01g0707 358 ProSiteProfiles PPM-type phosphatase domain profile. 101 354 IPR001932 -
Hepe01g0707 358 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169(InterPro)
Hepe01g0707 358 SUPERFAMILY PP2C-like 101 355 IPR036457 -
Hepe01g0707 358 Pfam Protein phosphatase 2C 110 346 IPR001932 -
Hepe01g0707 358 PANTHER PROTEIN PHOSPHATASE 96 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe01g0707 358 CDD PP2Cc 101 354 IPR001932 -
Hepe01g0707 358 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0707 Hepe-Chr1:69556491 Hepe10g1335 Hepe-Chr10:49448469 6.07e-115 dispersed
Hepe01g0707 Hepe-Chr1:69556491 Hepe09g0805 Hepe-Chr9:7890868 4.55e-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0707 K17506 - csv:101208170 494.582