Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0712 ATGAAATGGTTTTTGCTTCGAAACCCATCTTTGAAACTTGTGATTTGTTATAGGTTTTTGATTTTTTTTGGATTTGAAATCTTGCAGGAGTTGGATATGTGTAGTGGCTCGAAGAATAAAGTTGCTTCCTCGAATTCTGCCATGGAAGCTAACTTTCAGAAGCTTAACGATGGGGCTTTTTTCTCTGCGAGTTCAATTTTGCTTGAACTGTCAGCCTCTGATGATGTAGAAGGTTTGAAGAGAGAGGTTGAAGAAAAGGATTTGGATGTTGATGAACCAAGCTGCTGGTATGGAAGAGGAATTGGGTCAAAGAAGATGGGGTTTGAAGAAAGAACTCCACTGATGATTGCTTCCATGTTTGGAAGCTCTAAAGTTGTGAAGTACTTAATTGAGACAGGGAAGGTTGATGTCAACAGGGCTTGTGGTTCAGATATGACCACTGCCCTTCACTGTGCCTCTGCTGGTGGCTCTGGTTCTTCTCTTGAGGCTATCAAGTTCTTGCTCGACGGATCTGCCGACGTCGATTGTGTCGATGCTAACGGGAGAAAACCTGTTGATTTGATTGTTTTAGCTTGCAGGATGGTGTGTAATTCAGGAAGAAAGGCTATGGAGATGTTGTTGAGAGGCGGTGGTATGGCTGGGGAAGGTGATCTTAACCTTTACCTTGAAGAAGACCAGCAGAAGATCACAGCTTCCCAATCTGCAAAAGAAGGAAGTGATAAGAAAGAGTATCCTGTCGATGTATCGTTGCCCGACATCAACAGCGGGATATACGGTACCGATGAATTCAGGATGTATACTTTCAAGGTGAAGCCTTGTTCGAGGGCTTATTCGCACGATTGGACTGAGTGTCCTTTCGTTCATCCTGGTGAGAACGCCAGGCGTAGAGACCCCAGGAAGTACCCGTATAGCTGTGTCCCGTGCCCTGAATTCCGTAAGGGGGCGTGCCCAAAGGGAGATTCCTGTGAGTATGCACATGGTGTCTTTGAGTCTTGGCTCCACCCTGCTCAATACCGAACTCGGCTCTGCAAGGATGAGACTGGCTGCTCAAGGAAGGTTTGCTTCTTCGCTCATAGACACGACGAGTTGCGCCCTGTATATGCTTCAACAGGCTCAGGCATGCCTTCACCAAGGTCTCTTTCAAGCAGCGGAGCAGATATGTCTACCATGAGCCCGTTGGCTCTTGGTTCATCATCGATGTCGATGCCGACTACTTCGACGCCTCCCATGTCTCCTTTAGCATCAGTGTCTTCCCCTAAGAATGGAAACTTGTGGCAGAACAAGATTAACCTGACCCCTCCTGCTCTGCAGCTCCATGGTAGTCGGTTAAAGACAACTTTGAGTGCAAGAGATTTGGATTTCGAGATGGAATTGCTCGGGTTAGAAAAGAACGCGAACCAATTACAACATCAGCAGCAGTTGATCGACGAGATATCCCGGCTCTCCTCTCCTTCTTACTGGAGTGGAGATGTAAGCAGGAGTGCAGAGTTGAAGCAATCAAACCTTGATGACATGTTTGGATCATTAGATTCTTCCTTTTTGTCTCAGTTTCAGGGCGCCTCGCTAAAAACACCAAGCTCAGCTCAAGTTCAATCTCCGACCGGGCTGCAGATGCGCCAAAACATGAACCAACTCCGTGCAAGTTACCCCACTAACTTATCATCCTCACCTGTAAAAAAACCTTCCTCTTACGGCTTTGACTCATCAAGTGCAGTGGCAGCTGCTGTGATGAACTCAAGGTCTGCTGCCTTTGCAAAACGAAGCCAGAGTTTCATCGATCGGGCTGCAGTCACCCGTCTTCCCGGGTTCACCACAGCTGCAAACTCTGCAGCTACAATGTCTTCCCATCTCTCAGATTGGAACTCGCCTGATGGCAAACTAGACTGGGGAATGCACGGCAACGATCTCAACAAACTCAAGAAATCTGCTTCGTTTGGGATCCGAAACAACAGCATGGGAGCTCCCACCTTCGCACCATCAGCAGGAGAGCCCGATGTCTCTTGGGTTAACTCCTTGGTTAAAGATGTTCCCTCTGACAGGTTCGAGATGTTCGGTGCCGAGAAGCGGCAATACAACCTCAAAAGAGAAATCAACGAGATGCTCCCATCCTGGATGGAGCAGCAGTTGTATGCAGAGCAGGAGCAATTTGTGGCATAA 2157 47.66 MKWFLLRNPSLKLVICYRFLIFFGFEILQELDMCSGSKNKVASSNSAMEANFQKLNDGAFFSASSILLELSASDDVEGLKREVEEKDLDVDEPSCWYGRGIGSKKMGFEERTPLMIASMFGSSKVVKYLIETGKVDVNRACGSDMTTALHCASAGGSGSSLEAIKFLLDGSADVDCVDANGRKPVDLIVLACRMVCNSGRKAMEMLLRGGGMAGEGDLNLYLEEDQQKITASQSAKEGSDKKEYPVDVSLPDINSGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGACPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCSRKVCFFAHRHDELRPVYASTGSGMPSPRSLSSSGADMSTMSPLALGSSSMSMPTTSTPPMSPLASVSSPKNGNLWQNKINLTPPALQLHGSRLKTTLSARDLDFEMELLGLEKNANQLQHQQQLIDEISRLSSPSYWSGDVSRSAELKQSNLDDMFGSLDSSFLSQFQGASLKTPSSAQVQSPTGLQMRQNMNQLRASYPTNLSSSPVKKPSSYGFDSSSAVAAAVMNSRSAAFAKRSQSFIDRAAVTRLPGFTTAANSAATMSSHLSDWNSPDGKLDWGMHGNDLNKLKKSASFGIRNNSMGAPTFAPSAGEPDVSWVNSLVKDVPSDRFEMFGAEKRQYNLKREINEMLPSWMEQQLYAEQEQFVA 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 69671954 69676257 - Hsped.01g07120.1 Hepe01g0712 559822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0712 718 ProSiteProfiles Ankyrin repeat profile. 144 179 IPR002110 GO:0005515(InterPro)
Hepe01g0712 718 MobiDBLite consensus disorder prediction 372 417 - -
Hepe01g0712 718 FunFam Zinc finger CCCH domain-containing protein 66 260 328 - -
Hepe01g0712 718 ProSiteProfiles Zinc finger C3H1-type profile. 302 329 IPR000571 GO:0046872(InterPro)
Hepe01g0712 718 ProSiteProfiles Ankyrin repeat region circular profile. 109 133 - -
Hepe01g0712 718 Pfam Ankyrin repeats (3 copies) 109 176 IPR002110 GO:0005515(InterPro)
Hepe01g0712 718 MobiDBLite consensus disorder prediction 367 417 - -
Hepe01g0712 718 Gene3D - 30 235 IPR036770 -
Hepe01g0712 718 SUPERFAMILY Ankyrin repeat 100 190 IPR036770 -
Hepe01g0712 718 PANTHER UNKEMPT FAMILY MEMBER 104 675 IPR045234 -
Hepe01g0712 718 ProSiteProfiles Ankyrin repeat profile. 109 133 IPR002110 GO:0005515(InterPro)
Hepe01g0712 718 SMART c3hfinal6 337 360 IPR000571 GO:0046872(InterPro)
Hepe01g0712 718 SMART c3hfinal6 302 328 IPR000571 GO:0046872(InterPro)
Hepe01g0712 718 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 306 327 IPR000571 GO:0046872(InterPro)
Hepe01g0712 718 SMART ANK_2a 144 176 IPR002110 GO:0005515(InterPro)
Hepe01g0712 718 SMART ANK_2a 109 139 IPR002110 GO:0005515(InterPro)
Hepe01g0712 718 Gene3D - 303 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0712 Hepe-Chr1:69671954 Hepe05g0577 Hepe-Chr5:8188247 1.17e-147 dispersed
Hepe01g0712 Hepe-Chr1:69671954 Hepe08g0724 Hepe-Chr8:6521381 7.91e-236 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54775 PF12796 Ank_2 1.70E-08 CL0465 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0712 - - - 0.0