Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0716 ATGACGAAATCACCCTCTCCGACCGTCGCCGGCGCCTCCTTTTCCGTCCTCATCCTCATCGCCGTCGTTTTCCCTCTGTTTCCGGCGACTCAAGCTCTCGGCTCTGCCTCCACCCTTGCCGTCAGCTACGGCTCAGCCACCGTCTGCGGCATCGTCGCCGAGCAGCCGACCCAACGGATTTTGTGCTTCCGTAACGGTCAACCCATTTTTATCGAGCCAAACATATCCTTCTCCGCCGTGTCCGGCGGCCGGAATACCTTCTGCGGCATTAGGTCCGGCGGCTACACCCTCCTCTGCTGGGACTTCGACCCAACCACCGCTGCGTTTTCCCGGAGAAGACTCTACTTCAACTCCACCGTGCTTCTCGAGAATCTCGCCGTCGGGGACGACCAAATCTGCGCCACGCTGGTCGGCGCCGGCAATGTAACTTGCTGGCGAGAAGGTAACAACGCGAGAGTTGGATTTTCTTCTCTTCAATTCGATTCGATTTCTTCTGGGTTTGGATTTTCTTGCGGAATTTTGAAGGGGAATCAATCCGTTCGATGTTGGGGTCGAAATTCGTCGATTGCGACCCTAATCGAAAATGGGTTTCGAAATATTTCAATGTTGACCATCATCGCCGGTGGCTTTCATGCTTGTGGATTGAATTTCTCCGGTGGGTTGATTTGTAGAGGGAAAAACGATTTTGGGCAGTTGGATTTTCCTTCAAATTTATCTATGGGGTTCTCGGATTTGGCCCTCGGAGAACGCCATAGCTGTGGGATTTTGCTCTCGAATCGATCGGTGGTTTGTTGGGGCAGTTTGGATTTCTCTGTTGATTCGATTCGAGAAACTTCCTTTGAGTTAATTTCTTCGGGATCGGATTTCGTTTGTGGGTTAACGACAAGTAATTTCTCTGTTCTTTGTTGGGGGACTGGTTGGTTGAATGATTCTTTAGGTAATTTTTCAATTTCTCTTCCTAAGATTCTTCCTGGTCCTTGTGTTCAATCTTCTTGTAGTGATTGTGGGGTTTATCCTCTGTCTCAAACGCTCTGTTCTGATTCTGGGAATGTCTGTAATCGTTGTTTGGTTGCTGTTTCTACCCCGCCGTTGCCTCCACCACCTCCAGCTGCGTCGCCACCGCCAGTGGTGGCGACGACCCCATCATCTCCTCCGGCAGTTTTGAAAAGGGGTTTATTGGCATTTGCTATTGTGGGCTCAGTTGGGGCCTTTGCTGGGATTTGTACTGTTGTTTACTGTTTGTGGACTGGTGTTTGTTTTGGGCACAAGAAGATACATAACTCTGTTCAACCTACCATTACTCGAGCTGGCTCGAGTAATGGGGGAACGACGACATCGAATACGAACAACAGCCCGCCGTCGAGGTCGTTGACGATTCGGCGACAGGGGTCGAGGATAATGCGGAGGCAAAGGAGTGGGACATCGTCGAAGCACGCGGCGGAGAGAGCGGAGGAATTCAGTCTAGTTGAGCTTGCTATGGCTACGAATGAGTTCTCGGCCGAGAACAAGGTTGGTGAGGGGAGCTTCGGCGTGGTGTACCGGGGGAAACTTTCGGATGGTCGGGAAGTTGCGATTAAGAGAGGCGAAACGGGGGGAAAAACGAAGAAGTATCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTAGCATTCTTGTCTAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTATTGTGAGGAGAAAGATGAGAGATTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTACAATCATCTTCATGACAAGAACAACATTGAAAAAGCTAACAGTGTTATAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCACAACTATGCAGTCCCTCCCATAATCCATAGAGATATCAAATCATCCAACATTCTGCTCGACTCGAATTGGACAGCAAGAGTGTCTGATTTCGGGTTGTCCTTGATGAGTCCGGGGTCAGACCGTGACTTCCGACCGACGAAAGCAGCTGGGACGGTTGGTTACATCGATCCTGAATACTATGGACTCAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGAGTGGTGTTGTTGGAGCTTTTGACAGGGAAGCGAGCTATATTCAAGGATGATCAACAGGGAGGGACACCGGTGAGCGTCGTTGATTTTGCAGTGCCTGTGATTATGGTCGGAGAACTCGTGAAGATTCTGGATCAGAGAGTCGGGCCACCGCAGATAAACGAATCGGAGGCAGTGGAGCTCGTGGCTTACACGGCGATGCACTGCGTGCATTTGGAAGGGAAAGATCGACCGACGATGGCCGACATTGTCGCTAATTTGGAGCGAGCTTTGAATCTCTGTGATGATAGCCATGACAGCATCTCTAGTGGTGGAATTTCCATTGTTTCAGAGTGA 2424 49.3 MTKSPSPTVAGASFSVLILIAVVFPLFPATQALGSASTLAVSYGSATVCGIVAEQPTQRILCFRNGQPIFIEPNISFSAVSGGRNTFCGIRSGGYTLLCWDFDPTTAAFSRRRLYFNSTVLLENLAVGDDQICATLVGAGNVTCWREGNNARVGFSSLQFDSISSGFGFSCGILKGNQSVRCWGRNSSIATLIENGFRNISMLTIIAGGFHACGLNFSGGLICRGKNDFGQLDFPSNLSMGFSDLALGERHSCGILLSNRSVVCWGSLDFSVDSIRETSFELISSGSDFVCGLTTSNFSVLCWGTGWLNDSLGNFSISLPKILPGPCVQSSCSDCGVYPLSQTLCSDSGNVCNRCLVAVSTPPLPPPPPAASPPPVVATTPSSPPAVLKRGLLAFAIVGSVGAFAGICTVVYCLWTGVCFGHKKIHNSVQPTITRAGSSNGGTTTSNTNNSPPSRSLTIRRQGSRIMRRQRSGTSSKHAAERAEEFSLVELAMATNEFSAENKVGEGSFGVVYRGKLSDGREVAIKRGETGGKTKKYQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNIEKANSVINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWTARVSDFGLSLMSPGSDRDFRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDQQGGTPVSVVDFAVPVIMVGELVKILDQRVGPPQINESEAVELVAYTAMHCVHLEGKDRPTMADIVANLERALNLCDDSHDSISSGGISIVSE 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 69905240 69908023 + Hsped.01g07160.1 Hepe01g0716 559826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0716 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g0716 807 FunFam serine/threonine-protein kinase-like protein CCR1 467 578 - -
Hepe01g0716 807 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524(InterPro)
Hepe01g0716 807 Gene3D Phosphorylase Kinase; domain 1 460 578 - -
Hepe01g0716 807 Pfam Protein kinase domain 499 781 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0716 807 Gene3D Transferase(Phosphotransferase) domain 1 579 799 - -
Hepe01g0716 807 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 36 797 IPR044815 GO:0004674(InterPro)
Hepe01g0716 807 FunFam Serine/threonine-protein kinase-like protein CCR4 579 799 - -
Hepe01g0716 807 SUPERFAMILY Protein kinase-like (PK-like) 482 783 IPR011009 -
Hepe01g0716 807 SMART serkin_6 498 787 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0716 807 MobiDBLite consensus disorder prediction 433 481 - -
Hepe01g0716 807 SUPERFAMILY RCC1/BLIP-II 68 266 IPR009091 -
Hepe01g0716 807 ProSiteProfiles Protein kinase domain profile. 498 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0716 807 MobiDBLite consensus disorder prediction 433 461 - -
Hepe01g0716 807 Gene3D - 76 311 IPR009091 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0716 Hepe-Chr1:69905240 Hepe05g1238 Hepe-Chr5:59301029 5.94e-90 dispersed
Hepe04g0094 Hepe-Chr4:29300561 Hepe01g0716 Hepe-Chr1:69905240 1.55e-32 dispersed
Hepe04g0927 Hepe-Chr4:63545413 Hepe01g0716 Hepe-Chr1:69905240 3.64e-56 dispersed
Hepe10g1327 Hepe-Chr10:49198408 Hepe01g0716 Hepe-Chr1:69905240 3.16e-49 dispersed
Hepe01g0716 Hepe-Chr1:69905240 Hepe06g0167 Hepe-Chr6:6067003 1.09e-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72447 PF00069 Pkinase 1.30E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0716 - - - 0.0