Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0725 ATGGCCGTTCTCCTCCTCTTCTTCTGCTCTGTTTTCCTCTCTTCTCTCTTCCTCCTCCTCCGCCCGGCCAGATTCCGGCGAGTCCGCCTCCCCCCGGGCACTCTCGGCCTGCCTCTGATCGGAGAGACCCTCCAGCTCATCTCCGCCTACAAGACCGAGAACCCCGAACCCTTCATCGACGAGCGGGTCCGCCGGTTCGGACCTGTTTTCACCACCCATCTGTTTGGTGAGCCCACAGTTTTCTCCGCCGATTGGGAGACCAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTCGAGTGTAGCTACCCTGGCTCGATTTCGAACCTACTTGGGAAGCATTCTTTGTTGCTTATGAAAGGGAGTTTGCATAAGAGAATGCATTCTTTGACTATGAGCTTTGCTAATTCCTCCATTATTAGAGACCATCTTTTGCTCGACGTCGACCGCTTGATTCGCCTTAATTTTGAGTCCTGGACTGCCCGGATCTTCCTCATGGAGGAGGCCAAAAAGATAACATTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGGTGTGAATGGACTCAAAATCTCATGAAGGAATATCTTCTTGTCATTGAAGGATTTTTTACCGTCCCTTTCCCTCTCTTTTCCTCCACTTACCGACGAGCGATTCAGGCACGAAGGAAAGTGGCCGAGCAATTGGGGACGGTGGTGCGGGAACGAAGGAAGGAGAGCAAGGATGGAGAGAGGAAGAAGGACATGCTCGGAGCGTTGCTCGCCGGAGAAGACGCCCTCTCCGACGAGCAAATAGTAGATTTCTTATTGGCTCTGTTGGTGGCGGGATATGAAACGACGTCCACAACCATGACACTCGCCGTTAAGTTCCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACGAGCAAATCAAAGCAAGGATGAAGGAATCAGACCAACATCTTCAATGGAATGATTATAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTTCCAACATAATCAGTGGGGTGTTTAGGAGGGCAATGACAGATGTAAATATCAAAGGTTATACAATTCCAAAAGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGATCATTTCAAAGATGCTCGCTCTTTTAATCCATGGAGATGGCAACAGCCGAAAAGCTCGGGGTCGACAACGGTAAATGCATTTACCCCGTTCGGAGGAGGTCCGAGGTTATGCCCCGGTTACGAGCTTGCTAGAGTAGAACTCTCTGTTTTCCTTCATCATCTTGTCACCCAATTCAGTTGGGTTCCAGCAGAAGATGATAAGTTGGTATTTTTCCCAACAACAAGAACACAGAAGCGCTATCCTATCTACGTGACGCGTAAGAACGAAACTAGACAATGTAAAGACAGTCATTCAGACACATGA 1446 48.48 MAVLLLFFCSVFLSSLFLLLRPARFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLLDVDRLIRLNFESWTARIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPFPLFSSTYRRAIQARRKVAEQLGTVVRERRKESKDGERKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARMKESDQHLQWNDYKSMPFTQCVVNETLRVSNIISGVFRRAMTDVNIKGYTIPKGWKVFASFRAVHLDHDHFKDARSFNPWRWQQPKSSGSTTVNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKNETRQCKDSHSDT 481
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 70030965 70037962 - Hsped.01g07250.1 Hepe01g0725 559835
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0725 481 CDD CYP90-like 62 467 - -
Hepe01g0725 481 PANTHER CYTOCHROME P450 26 29 444 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Hepe01g0725 481 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 FunFam Cytochrome P450 90A1 20 468 - -
Hepe01g0725 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe01g0725 481 Pfam Cytochrome P450 204 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 Gene3D Cytochrome P450 20 468 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 SUPERFAMILY Cytochrome P450 24 467 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g0725 481 Coils Coil 299 319 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0725 Hepe-Chr1:70030965 Hepe02g1478 Hepe-Chr2:19193017 5.19e-115 dispersed
Hepe01g0725 Hepe-Chr1:70030965 Hepe03g1471 Hepe-Chr3:71482274 2.03e-123 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0725 K09588 - csv:101216594 857.44